Oncorhynchus tshawytscha (Chinook salmon): 112226583
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Entry
112226583 CDS
T05605
Name
(RefSeq) rho guanine nucleotide exchange factor 18
KO
K21066
A-kinase anchor protein 18
Organism
otw
Oncorhynchus tshawytscha (Chinook salmon)
Pathway
otw04530
Tight junction
Brite
KEGG Orthology (KO) [BR:
otw00001
]
09140 Cellular Processes
09144 Cellular community - eukaryotes
04530 Tight junction
112226583
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
otw04131
]
112226583
Membrane trafficking [BR:
otw04131
]
Others
Rho GTPase associated proteins
Rho guanine nucleotide exchange factors (GEFs)
112226583
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RhoGEF
PH_16
Motif
Other DBs
NCBI-GeneID:
112226583
NCBI-ProteinID:
XP_024246771
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All DBs
Position
LG28:complement(7269303..7295372)
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AA seq
926 aa
AA seq
DB search
MDDLDAVRGLSPRPPPPEDSVSLSSSSTDIINLDDGHYSALLAELEADAQDLEGESWSVS
VDQQYIKRLHKDAIKRQDVIYELIQTEVYHMRTLKLLLSVYQYELRRNLQMEETRLDRMF
PQMDSLLHIHQHFLWCLRDCRDGQNHYTVTQLGAILINQFSGEMGERMKESYGDCCSHHT
DAVGFYKEQLQNNKKFQNLITKIGRLSIVRQLGVPECILLVTQRLAKYPFLVERILQNTD
ADSEEHDALAQALVLIRETISAVDSQVHDYERASWLRDIGSSLEPHSCGRLKDGRVFKRE
DLAVGSRNLLHEGTVNWQAANRWLKGSLCMKDAQIMQSLTEKLRMFADMAEAVTGLEDVA
NHSRLLLRSDDLDPQQGETLLKGAITEVENLQSLLLSGVTLRDPYPPPEDFLGSLEYSLR
PEDLRLLRGGLGLGGLECMNLAALRRAETLGGYVCNPIPPMKNGNIQAGERPGSVAVQPL
DRGQHSNSGPQLQDLDQSESLEMSADESPAPASYWTSPCPNPSFPEAEFFDRVLLLSQKL
YSLLAIVSQQDSHIELQRASLSEREHPGRPRGNVLLEQEKQRNMEKQREEMANFHKLQTQ
HRQEQARWEEEQECHQLQVEVLEAELRHREEECRRLKEKLAEERGELERWRETYQQDLER
LRESTRTVEKQKERLDLQMKLKKNKTIAKPGSFNFNTQQAVPHSQSFRGDLPHSASFRGD
LSQSFRGDLIGGWTPGGDVTPIPASKVHVQPSLSLATAFLEPPPEVPLHRESISPAPPKA
EVPIHLISTTNQVVHKPGAVQQQIPTKLATLSSKGKEKSRKKGSHQRMHSAASIDMSQVV
PIRVTRKEGGSLRGKRTVSPHRSYQTDCFFSPPEPLSNAKHSQTLLSSSSMRMNSQSHFP
PPEPPHPPPFPKDIARKPTKERVIYL
NT seq
2781 nt
NT seq
+upstream
nt +downstream
nt
atggatgacctggatgctgtcagaggactttctcctcgaccccctcctcctgaggactct
gtgtccctctcctcgtccagcaccgacatcatcaacttagacgatggccactacagtgcc
ctgctagcggagttggaggctgatgctcaggacctagagggagagtcctggagtgtctct
gtggaccagcagtacataaagaggctacacaaagacgctataaagagacaagatgtcatc
tatgagttgatccagactgaggtgtaccacatgcggaccttaaagctgctgctgagtgtg
taccagtatgagctgagacgcaacctacagatggaggagactaggctggacaggatgttc
cctcagatggacagcctgctgcacatccaccaacacttcctgtggtgtcttagagactgc
cgcgacggacagaatcactacacagtcacacagctgggagctatactcatcaaccagttt
tcaggtgagatgggagagaggatgaaggagagctatggagactgctgcagtcaccacaca
gatgctgtcggcttctacaaagaacaactacagaacaacaagaagttccagaacttgatt
acgaaaatcggtcggttgtccatcgtgcggcagttaggagtcccagaatgtattctgttg
gtgactcagcggctcgcaaagtacccctttctggtcgaacgcattctacagaacactgat
gctgacagtgaggagcacgatgccctggcccaagccctggttctgatcagagagaccatc
tctgctgtggactctcaggtccatgactatgagagggcctcttggttgagagacataggc
agcagtttggaacctcattcctgtggcaggctgaaggatggaagggtgttcaagagagag
gacctggcagtggggtccagaaacctgctccatgaggggactgtcaactggcaggcagcc
aacaggtggctgaaagggagtctatgtatgaaggatgcccagatcatgcagagcctgaca
gagaagctgcgtatgtttgctgacatggcggaggctgtaacagggctggaagatgtagct
aatcactctcgtctgctgctccgcagtgacgacttagacccccagcagggggagacactg
ctcaagggggccatcactgaggtggagaatctgcagagccttctcctgtccggtgtgact
ctgagagacccatacccccctccagaggacttcctgggatcactggaatacagtttgaga
cccgaagatctacggctccttcgaggggggctaggccttggggggcttgaatgcatgaac
ctagccgcactcaggagagccgaaaccttagggggctatgtctgcaatcccattccccct
atgaagaatggtaatatacaggcgggagaacggccaggcagtgtggcggtacaacctcta
gacagaggtcagcattcaaactctggcccccagctacaggaccttgaccagtcagagagt
ctggaaatgtcggctgatgagtcacctgcaccagcatcatactggacttctccatgccca
aatccatcctttcctgaagctgagttctttgacagagtgctgctgctctcacagaaactc
tacagtctgctggccatcgtgtcccagcaggacagccacattgagttgcagcgtgcctcg
ctgtcagagcgtgagcatccgggccgtcctcgtggaaatgtgctcctggagcaggagaaa
caacgtaacatggagaaacagagagaggagatggccaacttccacaagctgcagacacag
cacagacaagaacaggctcgctgggaagaggagcaggagtgccaccagttgcaggtggag
gtcctggaggcagagctaagacacagagaggaggagtgtaggagactgaaggagaagcta
gcagaggagaggggggagctggagagatggagagaaacctaccaacaggatctggagagg
ctgagagagtctacaaggactgtggagaaacagaaggaacgcctggatttacagatgaag
ttgaagaagaacaagaccattgccaaacctgggagttttaacttcaacactcagcaggct
gtcccccactcccagtcgtttcgaggggacctcccacactctgcttccttccgaggggac
ctctcccagtcgttccgaggggacctgattggtggttggaccccgggaggtgacgtgacc
cccatcccagcttctaaggtccacgtccaacctagcctctctctagccacagctttcctg
gagccacccccagaggtgccccttcatagggagagcatcagccctgcgccccctaaagcg
gaggttcccattcacctgatcagcaccaccaaccaggtggtccacaagccaggggctgtg
cagcagcagatccccaccaagctggctaccctcagcagcaagggcaaggagaagagcaga
aaaaagggatcgcaccagcgcatgcatagtgcagcatctatagacatgtctcaggtggtg
ccgatcagagtgacaagaaaagagggcgggagtctgcgagggaagaggactgtgagtcct
cacaggagctaccaaacagattgtttctttagtcctccagagcctctgtccaatgccaag
cactcccagaccctattgtctagcagcagcatgaggatgaacagccagagccacttccct
ccacccgaacctccccatcctccacccttcccaaaagacatagcacgcaaaccaaccaag
gaacgcgtaatctacctgtaa
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