Oncorhynchus tshawytscha (Chinook salmon): 112226592
Help
Entry
112226592 CDS
T05605
Name
(RefSeq) E3 ubiquitin-protein ligase RNF126
KO
K11982
E3 ubiquitin-protein ligase RNF115/126 [EC:
2.3.2.27
]
Organism
otw
Oncorhynchus tshawytscha (Chinook salmon)
Brite
KEGG Orthology (KO) [BR:
otw00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
otw04131
]
112226592
04121 Ubiquitin system [BR:
otw04121
]
112226592
Enzymes [BR:
otw01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
112226592
Membrane trafficking [BR:
otw04131
]
Endosome - Lysosome transport
Rab GTPases and associated proteins
Rab associated proteins
112226592
Ubiquitin system [BR:
otw04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
112226592
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-RING_2
zf-C3HC4_2
zf-RING_11
zinc_ribbon_9
zf-C3HC4
zf-rbx1
zf-RING_UBOX
zf-C3HC4_3
zf-RING_5
zf-ANAPC11
zf-Nse
zf-RING_16
HypA
Rad50_zn_hook
DZR
zinc-ribbons_6
Motif
Other DBs
NCBI-GeneID:
112226592
NCBI-ProteinID:
XP_024246790
LinkDB
All DBs
Position
LG28:8122829..8127338
Genome browser
AA seq
312 aa
AA seq
DB search
MAEAPLGPCRFFCHQCSAEINPRLPDYTCPQCESGFIEELSEERSTENESTSIASTSDQN
RPTFEIMDHQHMFTFPPGYGQFSLGIFDENFDLRAGMPTEDNRETENRREREMASRQRYS
ARQPRGRHIPRRQGQRHEGVPTLEGIIQQLVNGIIAPTAMAPNIGMGPWGMLHSNPMDYA
WGANGLDAIITQLLNQFENTGPPPADRERIKTLPTIQITEEHVGSSLECPVCKEDYSVGE
TVRQLPCNHLFHNDCIVPWLEQHDTCPVCRKSLSGQNTATDPPGLSGMNFSPSSSSSSSS
NSPSNENAANNS
NT seq
939 nt
NT seq
+upstream
nt +downstream
nt
atggctgaagctcccctagggccctgtcgttttttttgtcaccaatgttcagcagagatc
aaccctcgtctcccggactacacctgtccacagtgtgaatctggcttcattgaagagcta
tcagaggaaagaagcactgaaaatgagtccacatccattgcctccaccagtgatcagaac
cgtccgactttcgagattatggaccaccagcacatgtttacatttccgcccggatacgga
cagttttctctggggatctttgatgagaattttgacctccgagcagggatgccgacggaa
gacaaccgcgagacggagaaccggcgggaacgggagatggcatcacggcaacggtacagt
gcccggcaaccacggggacgacacatcccacggcgacagggacagagacacgagggagta
cccactttagagggaatcatccagcagctagtaaatggaatcatagcacccacagccatg
gctccaaacattgggatgggaccatggggcatgctacactcaaatccaatggactatgct
tggggtgccaatggacttgatgctatcattacccagttattgaatcagtttgagaacacg
ggtcctcctcctgctgacagagagaggataaagaccctgcccaccatccagatcacagag
gaacatgtgggttccagtttagaatgtcctgtgtgcaaagaagactacagtgtcggggag
actgtcaggcaacttccgtgcaatcacctgtttcacaatgactgtatagtaccatggctg
gaacaacacgacacatgtccagtgtgcagaaagagtctcagtggacagaacacagctaca
gaccccccgggactatcaggaatgaacttctccccttcctcctcctcttcatcctcctcc
aactcccccagtaacgagaacgctgccaacaactcctag
DBGET
integrated database retrieval system
