Oncorhynchus tshawytscha (Chinook salmon): 112226598
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Entry
112226598 CDS
T05605
Name
(RefSeq) leucine-rich repeat and immunoglobulin-like domain-containing nogo receptor-interacting protein 3
KO
K23533
leucine-rich repeat and immunoglobulin-like domain-containing nogo receptor-interacting protein
Organism
otw
Oncorhynchus tshawytscha (Chinook salmon)
Brite
KEGG Orthology (KO) [BR:
otw00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
otw04131
]
112226598
Membrane trafficking [BR:
otw04131
]
Endocytosis
Lipid raft mediated endocytosis
RhoA-dependent endocytosis
112226598
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
LRR_8
LRR_5
LRR_4
I-set
Ig_3
LRR_1
ig
Ig_2
LRRNT
LRR_9
LRR_6
V-set
Motif
Other DBs
NCBI-GeneID:
112226598
NCBI-ProteinID:
XP_024246797
LinkDB
All DBs
Position
LG28:8454925..8511769
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AA seq
627 aa
AA seq
DB search
MTTRAMIGSLGPSVWSLTPWRWVSLWGPALLLVTIISLLPGSCQACPPRCECSAQIRSVS
CQRRRLTGIPEGIPTETRLLDLSRNRLRWVEMGDLAPYPHLEEVDLSENLIATLEPNAFA
NLQSLRVLQLRGNQLKLVPMGAFAKLGNLTTLDLSENKMVILLDYTFQDLRSLRHLEVGD
NDLVYISHKAFSGLLGLEDLTIEHCNLTSISGQTLSYLRSLVTLRLRHLSIAALEDHNFR
KLNNLRGLEIDNWPYLEYISPLSFQGLDLSWLSITNSNITSVPSSSFRNLIHLTHLNLSF
NPITTLEPWAFRELLRLKELIMVNTGLATVEPHSLGGLRQIRVLNFSSNELQTLEEGSFH
SVNSLETLRVDGNPLLCDCRLLWILQRRKTLNFDGRVPVCAGPEEVQGYSLSTFTDSALF
DHFTCQKPKIRNRKLQQVTAREGQPVSFLCNAVGEPTPNIMWISPQRRIITAKSNGRITV
LPGGTLEIRYAQVTDSGTYMCIASNAGGNDTYFAMLTVRGAPLDAASAFFANRSLYGGEF
FNDTNLNSTRVFLKFTLDLTTILVSTAMGCITFLGVVLFCFLLLFAWSRGRGQRKNNFTV
ETPFRKAEGPAATGSAGGARKFNMKMI
NT seq
1884 nt
NT seq
+upstream
nt +downstream
nt
atgaccaccagggccatgattggctccctgggccccagtgtgtggtccctgaccccatgg
cggtgggtgagtctctgggggccggccctgctgctggttaccattatatccctgctgcca
ggtagttgccaggcatgccccccgcggtgcgagtgctcggcccagatccggtcagtctcg
tgtcaacggcggcgcctcaccggcatcccagagggcatccctacagaaacccgcctcctg
gacctcagccggaaccggctccgctgggtcgaaatgggcgacctggcaccgtacccacac
cttgaagaagtggacttgagtgagaatctcattgccacgctggagcccaatgcgttcgcc
aatctgcagagcctgcgggttttacagctgagggggaaccagctgaagctggtacccatg
ggcgccttcgccaagctgggaaacctgaccacgctggatctgagtgagaacaagatggtg
attctgttggactacaccttccaggacctgaggagtctgagacacctggaggtgggagac
aacgacctggtctacatttctcataaggccttttctggtcttctggggctggaggacctg
accatcgagcactgcaacctgacgtccatctctggccagacactgtcctacctacgcagc
ctggtcactctgcgattaaggcacctcagcattgccgccctagaagaccacaacttccgc
aagcttaacaacctgcgggggctggagatcgataactggccctatctggagtacatctcc
ccgctcagcttccagggtctggacctgtcctggttgtccatcactaacagcaacatcacc
tccgtcccctcgtcctccttcaggaacctgatccacctcactcacctcaacctgtctttc
aaccccattaccactctggagccctgggctttcagggagctgctgaggctcaaggagctg
atcatggtgaacacgggcctagctacggtggagccccactccctgggcggcctcagacag
atccgggtcctcaacttctcctccaacgaactccagaccctggaggagggatcgttccac
tctgtcaacagtctggagacgctgcgggtggacgggaacccgctgctgtgtgactgccgt
ctgttgtggatcctgcagagacgcaagaccctcaactttgacggcagggtgcccgtgtgc
gctgggccggaggaggtgcaggggtatagccttagcaccttcaccgactcagcgctcttc
gatcacttcacatgccagaagcccaagatacgcaaccgcaagcttcaacaggtgacggct
cgtgagggccagccagtgagtttcctctgcaatgcagtgggagagcccacccccaacatc
atgtggatctcccctcagcgccgaataatcacagccaagagcaatggccgcatcactgtc
ctcccaggagggacgctagagatccgctatgctcaggtcaccgacagtggcacctacatg
tgcatcgccagcaacgccggcggcaacgacacctactttgccatgctcaccgtacggggc
gcgccgctggatgccgcgtcggctttcttcgccaaccgctcgctgtacggtggcgagttc
ttcaacgacacaaacctgaacagcacgcgcgtcttcctcaagttcaccctggacctgacc
accatccttgtctccacggctatgggctgcatcaccttcctaggcgtggtgctcttctgt
ttcctgttgttgttcgcatggagcagggggcggggccagcgcaagaataacttcacagtg
gagacccctttccggaaggccgaggggcctgcggccacgggtagtgccggaggagcccgg
aaattcaacatgaagatgatatga
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