Oncorhynchus tshawytscha (Chinook salmon): 112226641
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Entry
112226641 CDS
T05605
Name
(RefSeq) cactin-like
KO
K25058
cactin
Organism
otw
Oncorhynchus tshawytscha (Chinook salmon)
Brite
KEGG Orthology (KO) [BR:
otw00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
otw03041
]
112226641
Spliceosome [BR:
otw03041
]
Complex C
Other components
Complex C specific factors
112226641
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GFIT
Motif
Pfam:
Cactin_mid
CactinC_cactus
Motif
Other DBs
NCBI-GeneID:
112226641
NCBI-ProteinID:
XP_024246863
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All DBs
Position
LG28:8947269..8956219
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AA seq
884 aa
AA seq
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MGPKKHRRSRSGSRSRNRDRNRSKISRSRSPEEKRGRSRSIDRNIKTRRIARSESGNSNS
SGGSTRRQGQRPRSRDHPGSRSDSDSDKRRKLKGKSKDRSRSDSDDPKGRKKREKKKSRR
EDKGEKMIGRSQSQSDSGSSADRKRSRDGGNNDRERRWRSADRGSRSPSRERERQMRERT
RDRERMRSRDKEPSRCKEKSRERSSRRSEDRGRREISRGKDQRDKERNRRRSGSSDSSKS
SGSDGGARGGSPGSGEAGPSVRDEKKNQREMLKALETPEEKRARRLAKKEAKERKKREKM
GWSEEYMGYTNADNPFGDNNLLGTFKWQKALDRKGIGHLGEKDLKDRNKRIQEENRRELQ
KVKQLRLEREREKAMRETELEMLQREKEAEHFKTWAEQEDNFHLHQAKLRSKIRIRDGRA
KPIDLLAKYISAEDDDLAVEMHEPYTFLNGLTVTDMDDLLEDIKVYMELEQGKNVDFWRD
MTTITEDEISKLRKLEASGKGPGDRRDGINTSVSTDVQIVFKGKTYSQLQALNLNIETKI
RAGGSNLDIGYWESLMQQVRVFMGRARLRERHQDVLRQKLFKLKQEQGVESEPLFPIIKE
EPEDEAVTESEKDTPSGVPGPSSSSPSINQKRDAEEKDEQVAGPSTEGDGEKEGDGEEKG
EVVEAVLTEEDLIQQSQAEYDSGRYSPTLLLPSELPLDTHTITPDEDTHKLHLSRRQLAV
TGDANENAEDEFVRRAKQGMGGDEAQFSVELPLTGKMYLWADKYRPRKPRFFNRVHTGFE
WNKYNQTHYDFDNPPPKIVQGYKFNIFYPDLINKRSTPQYFLEPSPDNKDFGVLRFHAGP
PYEDIAFKIVNREWEYSHRHGFRCQFANGIFQLWFHFKRYRYRR
NT seq
2655 nt
NT seq
+upstream
nt +downstream
nt
atgggtccaaaaaagcatcgtcggtcccgttctggctctcgtagtcggaaccgggatcga
aacaggtccaaaataagcagatcacgatcacccgaagagaagagaggccggagtcggtcc
attgatcgaaacataaaaacccggagaattgcgcgttctgagagcggaaactcgaacagc
agtggtggatctacgaggcgacaaggacagcggccccgtagcagagaccatcccggatcg
agaagcgactcagacagcgacaagagacgtaaactgaagggcaaatcaaaagacagatcc
aggtctgactcagatgatccaaagggaaggaagaaaagagagaaaaagaagagcagaaga
gaagacaaaggagagaagatgattggcaggagccagtcccagtccgactcagggtctagt
gcagaccggaagagatcgagggacggggggaacaatgaccgggagaggagatggaggagt
gcagacagagggagtagaagccccagcagagaaagggaacgacagatgcgggagagaacg
agagacagggagagaatgagaagccgagacaaggagcctagccgatgtaaggagaaaagt
cgagaaagaagcagccggaggagtgaagaccgagggaggagagaaataagcagagggaag
gaccaaagggacaaagagcgtaatagacgtcgctctggatcctctgactcgtctaagagc
tctgggtcggatggcggggcccgtggaggcagcccggggtctggagaggccggtccctcg
gtacgagatgagaagaagaaccagagagagatgctgaaggccctggagaccccagaggag
aagagggccagacgactggccaagaaggaggccaaggagaggaagaagagagaaaagatg
ggctggagtgaggagtacatgggctataccaatgcagacaaccccttcggagacaacaac
ctgctgggcaccttcaaatggcagaaggctctggacaggaagggcattggccatctgggt
gagaaggacctgaaggacaggaacaaacgtatccaggaggagaatcgcagagaactgcag
aaggtgaagcagctgcgtctggagagggagagggagaaggccatgagagagaccgagctg
gagatgctgcagagagagaaggaggcagagcatttcaaaacctgggcggaacaagaggac
aactttcacttgcaccaggccaagctacggtctaagatccgtatccgtgacggccgtgct
aagcccatagaccttttggctaagtacatcagtgctgaggatgacgacctggctgtggag
atgcacgaaccttacaccttcctcaacggactcaccgtcactgacatggacgacctgctt
gaagatatcaaggtatacatggagctggagcaggggaagaatgtagacttctggagggat
atgaccaccatcacagaggatgagatcagcaagctccggaaactggaggcatctggaaaa
ggcccaggtgaccgtcgtgatggcattaacacgtcagtgagcaccgatgttcagatagtg
tttaagggaaagacgtacagccagctccaggcgctgaacctcaacatcgagactaagatc
cgagctgggggatccaacctggacataggctactgggagagcttgatgcagcaagtcagg
gtcttcatgggccgagcacggttgagagagaggcaccaggacgtgttgcgtcagaagctg
ttcaagctgaaacaggagcagggagtggagagtgagcctctcttcccgatcatcaaagag
gagcctgaggacgaggctgtaaccgagagcgagaaagacactccctcaggggtgcctgga
ccctcctcttcctccccttccatcaatcaaaagagagatgcagaggagaaggatgagcaa
gtggcgggcccatccacggagggagacggagagaaagagggggatggagaggagaagggt
gaggtggtagaggctgttctgacagaggaggatttgatccagcagagccaggcagagtat
gactctggccgctacagtcccacactgctgcttccctcagagctaccgctggacacacac
accatcacacctgacgaagacacacacaaactacacctctcacgcagacagctcgccgtc
acaggtgatgccaatgagaatgcagaggatgagtttgtgcgtcgcgccaaacagggcatg
ggcggggacgaggctcagtttagcgtagagcttcccctcacagggaagatgtacctgtgg
gctgataaataccgtccccggaaacctcgcttcttcaacagggtccacacaggcttcgag
tggaacaaatataaccagacccattacgacttcgacaaccctccgcctaagatcgtccag
ggctacaagttcaacatcttctacccggacctgatcaacaaacgttccacaccgcagtac
ttcctagaacccagtcccgacaacaaggactttggggttctgcggttccatgcgggcccg
ccatatgaggacattgcctttaagatcgttaaccgcgagtgggagtactctcaccgccac
gggttccgttgtcagttcgccaacgggatcttccagctgtggttccacttcaagaggtac
cgctacagaagatag
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