Oncorhynchus tshawytscha (Chinook salmon): 112226646
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Entry
112226646 CDS
T05605
Name
(RefSeq) nuclear receptor ROR-beta-like
KO
K08533
RAR-related orphan receptor beta
Organism
otw
Oncorhynchus tshawytscha (Chinook salmon)
Brite
KEGG Orthology (KO) [BR:
otw00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
otw03000
]
112226646
09183 Protein families: signaling and cellular processes
03310 Nuclear receptors [BR:
otw03310
]
112226646
Transcription factors [BR:
otw03000
]
Eukaryotic type
Zinc finger
Cys4 thyroid hormone receptor-like
112226646
Nuclear receptors [BR:
otw03310
]
1. Thyroid hormone like
1F. RAR-related orphan receptor
112226646
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-C4
Hormone_recep
Motif
Other DBs
NCBI-GeneID:
112226646
NCBI-ProteinID:
XP_024246871
UniProt:
A0A8C8K1L4
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Position
LG28:complement(9006016..9022787)
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AA seq
503 aa
AA seq
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MRAQIEVIPCKICGDKSSGIHYGVITCEGCKGFFRRSQQNNAMYSCSRQRNCLIDRTSRN
RCQHCRLQKCLVLGMSRDAVKFGRMSKKQRDSLYAEVQKHQKNQECLNQGLPLSREDVAG
GESKGDRHGELSRSYSSGGSSSTLSDLDDIAVLPKLFDLPLTPQEAHEYCSLDLQEDHGG
STGNTSNSSSPSSSSPISSNQNSPQQNLLDVTDANGIKHEYQMLSHTHVLLAHTHATLLE
TLPDDCTLMDIERITQSVVKSHLETSQYSSEELKRLTYNRMQYSPEETRNFQCESAESVW
QQCAHHITNSIQYVVEFAKRITGFMDLCQNDQIILLKAGCLEVLLIRMCRAFNATTNTMF
FNGKFASAQLFKALGCDDLVSAVFDLAKGLSRLQLTDEEMALFSAACLLSPDRPWLADSQ
KVQKLQAKVYLALQHSLHMSGAADEKLDQMVSKLPIMKSICNLHIDKLEFFRLVHPETAY
SFPPLYREVFGSEISLPDSTNNS
NT seq
1512 nt
NT seq
+upstream
nt +downstream
nt
atgagagctcaaatagaagtaataccctgcaagatctgtggggacaagtcctcaggaatc
cactatggagttattacctgtgaaggctgcaaggggttcttccgccgcagccagcagaac
aatgccatgtactcgtgttcccgccagaggaactgtcttattgaccgaaccagccgcaac
cgctgccaacactgcagactgcagaaatgtctggtgttaggcatgagccgggacgcggtg
aagtttggccgtatgtctaagaagcagcgcgacagcctgtacgctgaggtccagaagcac
cagaagaaccaggagtgtctgaaccagggtctgccactgtccagggaagatgtggctggg
ggagaaagcaagggggacaggcacggggagctcagtcgctcctacagcagcgggggctcc
agctccaccctgagtgacctggatgacattgcggtgctccccaaactgtttgacctcccc
ttgaccccacaggaggcccacgagtactgcagtctggacctgcaagaagaccacggcgga
agcactgggaacacctccaattcttcatcaccatcatcatcctcgcccatttcgtccaat
cagaattctccccagcaaaatctactggatgtcaccgacgccaatgggatcaaacacgag
taccagatgttgtcgcacacacacgtgctcctggcacacacacacgccacactgctagag
acactgcctgatgactgcactcttatggatatagagcgtatcacccagagtgtggtcaag
tcccacttggagacgagtcagtacagctctgaggaactgaagaggctgacatacaatcgg
atgcagtactcacctgaggagactcgcaacttccagtgcgagtctgcagagtctgtgtgg
cagcaatgtgcccaccacatcaccaattccatccagtacgtggtggagtttgccaaacgc
attacaggcttcatggacctgtgtcagaatgaccagatcattctgctcaaagcaggctgt
ctggaggtgctgttgattaggatgtgcagggcatttaacgccaccaccaacaccatgttc
tttaatggcaaatttgcctctgctcagctcttcaaagccctcggttgcgatgacctggtt
agtgccgtgtttgacctggctaaagggctctcccgcctgcagctgaccgatgaggagatg
gctctgttcagtgccgcttgcttactgtccccagaccgaccatggttagccgacagccag
aaggtccagaagctacaggcgaaggtctacctggctctgcaacacagtctgcatatgagc
ggggctgctgacgagaagctagaccagatggtatccaagctgccgataatgaagtccatc
tgtaatctccacatcgacaagctggagttctttcgtctggtccaccccgagaccgcatac
agcttcccaccactctaccgggaagtgttcgggagtgagatctctctccccgactctaca
aacaactcctag
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