Oncorhynchus tshawytscha (Chinook salmon): 112226662
Help
Entry
112226662 CDS
T05605
Name
(RefSeq) integrin alpha-6-like isoform X1
KO
K06485
integrin alpha 6
Organism
otw
Oncorhynchus tshawytscha (Chinook salmon)
Pathway
otw04510
Focal adhesion
otw04512
ECM-receptor interaction
otw04514
Cell adhesion molecules
otw04810
Regulation of actin cytoskeleton
otw04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
otw00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
112226662
04514 Cell adhesion molecules
112226662
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
112226662
09142 Cell motility
04820 Cytoskeleton in muscle cells
112226662
04810 Regulation of actin cytoskeleton
112226662
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
otw04147
]
112226662
04515 Cell adhesion molecules [BR:
otw04515
]
112226662
04090 CD molecules [BR:
otw04090
]
112226662
Exosome [BR:
otw04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
112226662
Exosomal proteins of breast milk
112226662
Cell adhesion molecules [BR:
otw04515
]
Integrins
Integrin alpha subunits
112226662
CD molecules [BR:
otw04090
]
Proteins
112226662
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Integrin_A_Ig_3
Integrin_A_Ig_1
Integrin_A_Ig_2
FG-GAP
FG-GAP_3
Integrin_alpha
Motif
Other DBs
NCBI-GeneID:
112226662
NCBI-ProteinID:
XP_024246896
LinkDB
All DBs
Position
LG28:9726440..9744455
Genome browser
AA seq
1085 aa
AA seq
DB search
MGLRFIQCISYLSLLLHLEWTHVSAFNLDTENVIEKKGEPGSLFGFSLAMHWQLSPLDKR
MLLVGAPRAKALRGQKAKITGGLYNCDTASTSSSCSRVQFDNDEDVNTESKENQWMGVTV
NSQGPGGKIVTCAHRYQRRLFVNTAQESRDITGRCYVLSQDLTIGTESDEDGGNWRFCEG
RARGHERFGSCQQGLSATFTRDYHYLVFGAPGAYNWKGVVRVEQKNNTLLEMGFYDDGPY
EVGDENRLDPDLVPVPANSYLGFSLDSGKAITKKGQLTVVAGAPRANHSGAVVLLKKETE
ASTMLSPEHILEGEGLASSFGYDLAVVDLTGDGWEDIVVGAPQFFEKDGEVGGAIYVYVN
KGGDWSKVTPTRIDGPRDSMFGLAVENLGDLNLDGYQDIAVGAPYYDSGSGKVFIYHGSA
QGINIKPAQVLSGVPSETKLFGYSLAGNMDLDRNSYPDLAVGSLSDSVFVYRTRPVISIQ
KVVKTTPKEIDLTKKNCGNSICLEVEACFSYTANPKSYSPRLTVAYSFEVEAERRKKGLP
PRVTFSTRSSDDNDYQSTGVLILSGQGKKECITARLTLQENIKDKLRGIPIDVTVEIKNS
KRKRRALPELPPILDSNEPITARAEVSFLKEGCGSDNVCQSNVQLQHRFCYREPNKDVFH
PLPVEDGVPVVSLSDQKDIALEITVTNQNGDDAHEAALVASFPPSLSYSASRSAPNADKQ
VICVTNTNGSQADCELGNPFKRGSEATFYIILSTAGISLNTTELEIDLKLETTSDQQNVA
RVKAKAKVVIELLLSLTGVAKPSQVYFTGEVKGESAMHSEGDIGSPIEYEFRVINLGKPL
KTYGSAALIVNWPKETVEGKWLLYLMKIDSRGLEQITCSPEREINSLAVKEEQSSTRRRR
AVVETDKPQEGTIARLTDKRKYTTLSCEDGAKCVEIRCPLQGLDSNAVILLRSRLWNSTF
LEEYSKLNYLDVIVKASLRVDGAAKNMVLRNAETQVRVTVFPERRVAQYGGLPWWIILVA
ILLGLLLLGLLVFLLWKCGFFRRSKYDDSVPSYNAVRIQKEEKDQLGSLEKKAWITSWSE
NESYS
NT seq
3258 nt
NT seq
+upstream
nt +downstream
nt
atggggttgagatttatacaatgtatctcatatctttcgcttctccttcacctggaatgg
acgcacgtatcggctttcaacctggacacagaaaacgtcattgaaaagaaaggagagccc
gggagccttttcggcttctctctggctatgcattggcaattaagtccgttggataaaaga
atgttgctggttggtgctccaagggccaaagctctgagaggtcagaaggcaaagatcaca
ggaggactctacaactgcgacaccgcttccacttcctccagctgtagccgagtgcagttc
gacaacgatgaggacgtgaacaccgagagtaaggagaaccaatggatgggtgtaacagta
aacagccaggggccgggaggaaagattgtgacgtgtgcccaccgctaccagcggcgtctg
tttgtgaacacagcccaggagtcacgtgacatcacagggcggtgttacgtgctgagccag
gacctgaccatcggtaccgagtctgatgaggacggagggaactggaggttctgtgagggg
cgggcacgcggccatgagaggtttggttcatgccaacagggtctgtctgccaccttcact
agggactaccactacctggtatttggtgcccctggagcgtacaactggaaaggtgtggtg
agagtagagcagaagaacaacactctgttggagatgggcttctatgacgacgggccctat
gaggtgggcgatgagaaccggttagacccagacctggtccccgtgcccgctaacagttac
ttgggcttctctctggactcggggaaggccatcactaagaagggtcagctgaccgtggtc
gccggtgccccgagagccaatcacagcggggcagtggtgttgctaaagaaggagaccgaa
gcgtccaccatgttgtcaccagagcacatcctggaaggggaggggctggcctcgtcgttc
ggctacgacctcgctgtggtggatctgaccggcgacgggtgggaggacatcgtggtggga
gccccgcagttttttgagaaggacggggaggtaggcggagccatttatgtctatgttaac
aagggcggagactggagtaaggtcacgcccaccaggatagatggacctcgggactccatg
tttggactggccgtagaaaacctgggagatctcaacctggacggctatcaggacatcgct
gtgggagcaccctattatgacagtgggtcagggaaggtgttcatctaccacggctcagct
cagggcatcaacatcaaaccggcgcaggtgttgtcaggggtgccatcggagacaaagctg
tttggttattctctagctggtaacatggacttggacaggaactcgtaccctgacctggcc
gtaggatctctctccgactctgtgttcgtctacaggactcggccagtcattagcatccag
aaggttgtcaagacaaccccaaaggagatcgatctgactaagaaaaactgtggcaacagc
atctgcttggaggtagaagcctgcttctcctacaccgccaacccaaaatcctacagcccc
agactgacggtggcgtactcctttgaggtggaggcggagcgtcggaagaagggtctccct
cccagagtgaccttctccacgcgttccagcgacgacaacgactaccagtccaccggtgtt
ctcatcctcagtgggcagggcaagaaggagtgtatcaccgccagactcacactacaggag
aacattaaggacaagctcaggggaatccccatcgacgttaccgtggagataaagaactcc
aaaaggaaaagaagagcgctcccagaactcccgcccatcctcgactccaacgagcctatc
acggcccgcgctgaggtgagcttcctgaaggagggctgtggcagtgataatgtgtgtcag
agcaacgtacagctccagcatcgcttctgctacagagagcccaacaaggacgtcttccat
ccactacctgtggaggatggggtgccggtagtctcccttagcgaccagaaggacatcgcc
ctggagatcacggtgaccaaccagaatggagatgatgcccacgaggcggcattggttgcc
tccttccccccctcgctctcctactctgcctcccgctctgcacccaacgcggacaagcag
gtgatctgtgtgaccaatacgaacggctctcaggcagactgtgagctggggaaccccttc
aagcgaggctcagaggcgacgttctacatcatcttgagcacagcaggcatctctctgaac
accacagagctggagatagacctgaagctggagacaacgagtgaccagcaaaacgtggcc
agagtcaaggccaaggccaaagtggtgatcgagctgctgctgtccctcacaggagtggcc
aagccctcccaggtctactttactggagaggtcaaaggtgagagcgccatgcattccgaa
ggagacatcggcagccccatcgagtacgagttcagggtgattaacctggggaagcccctg
aagacatacggcagcgccgccctgatcgtcaattggccaaaggagacggtggaggggaag
tggctcctgtacctcatgaagatcgactccaggggtctggaacagatcacctgctcccct
gagagagagatcaactcacttgccgtcaaagaggagcagagcagcacccggagaagacga
gccgtagtggagacagacaaacctcaggagggaaccatcgcacgactgactgacaagagg
aaatacactactttgtcgtgtgaggacggggcaaagtgtgtggagattcgctgccccctt
cagggcctggacagtaatgcagtcatcctgctcagatctcgcctctggaacagcacattc
ctggaggagtactccaagctgaactatctggacgtgatcgtgaaagcctctctcagagtg
gacggagcagccaaaaacatggtcctgaggaacgcagagacacaggtgagagtgacggtg
ttcccagagcgtcgtgtggctcagtacggaggactcccatggtggatcatcctggtagcc
atcttgttagggctgctgctgctcggcctgctggtcttcctgctgtggaagtgtgggttt
ttcagacgctccaagtacgacgacagcgttcccagttataatgcggtgcggatacaaaag
gaggagaaagaccaactgggaagcctggaaaagaaagcctggataacgagctggagtgag
aacgagagttactcttaa
DBGET
integrated database retrieval system
