Oncorhynchus tshawytscha (Chinook salmon): 112226695
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Entry
112226695 CDS
T05605
Name
(RefSeq) capping protein, Arp2/3 and myosin-I linker protein 3-like isoform X1
KO
K20493
leucine-rich repeat-containing protein 16
Organism
otw
Oncorhynchus tshawytscha (Chinook salmon)
Brite
KEGG Orthology (KO) [BR:
otw00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
otw04131
]
112226695
Membrane trafficking [BR:
otw04131
]
Others
Actin-binding proteins
Nucleation-promoting factors (NPFs)
112226695
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CARMIL_C
Carm_PH
LRR_6
Motif
Other DBs
NCBI-GeneID:
112226695
NCBI-ProteinID:
XP_042163838
LinkDB
All DBs
Position
LG28:complement(10998998..11047015)
Genome browser
AA seq
1476 aa
AA seq
DB search
MCVCAVVFVMLPVRQHFCERGIYLQYLTFVSCLLSTESIRRLIEKQSIKFVRAVKQDTKH
GKSEDRILVLATWRMYLFAVKVPAKVEVTFNFLEIRAMNTYPDHQVVIDTDKSTHSLRLQ
SQDHLDHMMNHINFALSRIFNNSMYAPTICRAEGDVSDGVLQFSPDSESSVETQRTCGGF
SETYAALCDYNGIGCKEEVQWDVDTIYHSQDNREFNLLDFSHLDSRDLAVMVASMAYNTW
FTKLYCTDMRIGSEVVEQVLHTISKSSSLEELTLENVGLKSDFPQKMATALSENPASAIH
SLNLAHNTLDNQGVSNLIQLVCRLNKGLRLLNLSKTSLSSKGVMSLSQALCSSDDYSNSL
LHLDLSKNPGILSGEDATNMYLFLAQPNCLVHLDLSGTDCTVDSLFGALLRGCCVDLAYL
NLSKNCFSHRKVRETLPVVRQFFSSAFSLTHVNLSSMKLPPDTLRALFLGLSSNPHISDL
HLDLSCCELRSAGAGVLQELFPRVACIGSLDISDNGLDADLLGVIPAFSRHPSLKHLLLG
KNFNIKGRVLDEILQKLVQLVQEEECALQSLSLADSRLRSRGTVLVNALGSNTCLRKVDL
SGNSLEDAGAKMLSKALQINTTLRSVTWDRNNTTATGFQDVARALEHNFTLHYMSIPLND
VTQAYRSAPEKIDQALTKIQRALLRNNQTQRFSQKQALRLHQGLVTSTAEQVMERLCVRV
QQQVCALRGSEEGEELQAARQVLKEARNSRALYPSLCELAHVLSVDGPVRQKLDSLAGEL
AKAADKELQVIVDSMVSLCRELCPMSSSSAERLNPPLSSVSERVSIPRSTIRTALMERAA
QDINRALEDVKLSVVSYLTNSIVDQILQELYTTHKTLLCQVSQAKRLDDAGTGRRTFRQS
RITDSLDFPDEEGLGMNIDTIAIKKRSSRTRRIRPVSTRLSLGDDPTSSPTHSGPLSRSA
SWEDLYTLPTQGAPLRHVTQVRPRPPRRHCRGQVPVETHCSENGGVNVLEDGLPDFYTKR
VLPDSQLSLLHQAQSLRRKKRRSVLSIFSGFRKNRSSTISNQETDSGSENVYSMIQHPKD
RGKGEAIIEVGANGRMMPSPRPIQGTPLPGMRGGRPSPHCLTQRQPSDLVGMVYSIGAED
EDSDSSFEIRPVGRDTDRQKDTPIASDTQTESRANGHAMSSASLTDKQADIQTDRQTDRQ
TEPVCQDLPMPSTQTDTQTEVERRTKETEGTESMEDRKEGAPCGQKPEPPSQSSKPSLAS
IKQRHLQGSSEKSTDGIGWTEGDRVEEENNEKRREGVQKERGAEGQRPPIPEKPGRDKTS
PKTLPPVTPPEETTNEKKTTPPVPPASAKPSFDLSQAPVSQDEGTNEKKSLPPVPPASTK
PVFDSPDHAGCQDEEGGRNGYPLKPHRNRKADSCDMGMCEGMERNSPNDLETGSSDRKPP
VKRPRLPENRNRSLDFPRTVCPESPEPANDNGVTSS
NT seq
4431 nt
NT seq
+upstream
nt +downstream
nt
atgtgtgtctgtgccgtggtgtttgtaatgttgcctgtaagacagcatttttgtgagaga
ggaatttacttgcagtatttgacttttgtttcatgccttctttccacagagagcatcagg
aggctcattgagaaacaatctatcaagtttgtgcgagctgtaaagcaggacacaaagcac
ggcaaatcagaggacaggatactggttctggcaacatggcgaatgtatctatttgctgtc
aaagtccccgcaaaggtggaggttactttcaacttcctggaaattcgagcaatgaacact
tatccagatcatcaggttgtcatagacacagacaaatcgacccactccttgagactgcag
tcacaagaccaccttgatcacatgatgaaccatatcaactttgccctctcacgaatattc
aataactccatgtatgctccgaccatctgccgagcagagggggacgtctctgatggagtc
ctccagttttcaccagactccgaatcatctgtagagactcagagaacctgtggcggtttc
tctgagacctacgcagctctgtgcgactataacggcatcggctgtaaggaggaagtgcag
tgggatgtggacactatctatcactctcaggacaacagggagttcaacctgctggacttc
agccacctggacagcagggacctggcggtgatggtggcttccatggcgtacaacacttgg
ttcaccaagctctactgcacagacatgcgcattgggtcagaggtggtggagcaggtcctt
cacaccatcagtaagtccagcagtctggaggaactcactctggagaacgttggcctcaaa
tcagacttccctcagaaaatggcgacggctctgtcagagaatcctgcctctgcaatccac
tctctcaacctggcccacaacaccttggacaaccaaggagtgtccaacctcatccagctg
gtgtgtcgtctcaacaaaggccttcgtctgctcaacctctccaagacgtccctctcctcc
aagggagtgatgtctctctcccaggccctctgctccagtgatgactactccaactctctc
cttcacctggacctgagcaaaaaccctgggattctgtctggggaggacgccacgaacatg
tacctgttcctagcccagccaaactgtctggttcatttggacctctctgggaccgactgc
actgtggactcgttattcggcgctctgttgaggggatgttgtgttgatctcgcttacctg
aatctctccaagaactgcttctctcacaggaaagtgagggagactcttcctgtcgtcaga
cagttcttcagttcagccttcagtcttacgcacgtcaacctgtcttccatgaagctccct
ccggacactctgagagctctcttccttggcctgtcttccaaccctcacatcagtgaccta
cacctggacctcagctgctgtgagttgaggtctgctggtgctggggtgctccaggagctg
tttcccagagtggcctgtattggtagtctggacatctcagacaacgggttggatgctgat
ctgctaggggtcatcccggccttctccagacacccttccctcaaacacttgctgctgggc
aagaacttcaacatcaagggcagggtgctggatgaaattctgcagaaactagtgcagtta
gtgcaggaggaagagtgtgccctgcagtccctctccctggcggactcgcgcctgcgctct
cggggcacagtgctggtgaacgctctgggcagcaacacctgcctgcgcaaggtggacctg
agtgggaacagcctggaggatgcgggggctaagatgctcagcaaagccctgcagatcaac
accacactcaggagtgtgacgtgggatcgcaataacaccacggctacaggattccaagat
gtggctcgggccctggaacataacttcaccctgcattacatgtccatccccctcaatgat
gtcacacaggcttaccggagtgcccctgagaagattgaccaagcgctgaccaagatccag
cgtgctctgttgaggaacaaccagacccagaggttctctcagaaacaggctcttcgtctg
caccaaggcctggtcaccagcactgctgaacaggtgatggagcggctgtgtgtgcgtgtg
cagcagcaggtgtgtgctctccgaggctcagaagaaggagaggagttgcaggctgccaga
caggtcctgaaggaggccagaaactcccgtgcgctctatccatctctgtgtgagctggcc
catgttctctcagtggacgggcctgtcagacagaaactggactctctagcaggagagctg
gccaaggctgctgataaggaactacaggtgatagtggactccatggtgtctctgtgtcgg
gagctgtgtcccatgtcctcctcctcagctgagcgactcaaccctccgctctcctccgtc
tcagaacgtgtctccatccctcgctccaccatccgcaccgccctgatggagagagcggca
caggacatcaacagagccctggaggacgtaaagctgtcggtggtctcctatctgaccaac
tccatagtggatcagatccttcaggagctctacaccactcacaaaaccttgctgtgtcag
gtgtcccaggcgaagcgtttggatgacgcagggacaggcaggcgcaccttcagacaatcc
agaatcacagactcactggacttccccgacgaggaaggcctgggcatgaacatcgacacc
atcgccatcaagaaacgtagctccagaaccagaaggattcgtccggtctcaaccagattg
agtcttggtgatgatcccacctcctccccgactcactctggccccctatcccgctcagca
tcatgggaggatctgtacaccctgcctacccagggtgcaccactgcgccacgtgacacag
gtcaggccacggcccccacgaaggcactgtcgaggacaagtccccgtggaaacacactgt
tcagagaacggaggagtcaacgtgctggaggatggactgccggatttctataccaagaga
gtcctgcctgacagtcagctgtcactactccatcaagctcagtccctgaggaggaagaag
agacgcagtgtgctgtcgatcttctccgggttccgcaagaaccgcagctccaccatctcc
aatcaggaaacagatagtggctcagagaacgtgtactctatgattcagcaccctaaggat
cgtgggaagggggaggccatcattgaggtgggagccaatgggaggatgatgccgtcccct
aggcccatccagggcacaccactgcctgggatgagggggggcaggcctagcccccactgc
ctcacacagagacagccttcagatctggtcgggatggtatacagtatcggagcagaagac
gaggactcagacagtagctttgagatcagaccagtgggcagagacacagacagacagaag
gacacgccgattgcatcagacacccagacagagtcccgtgccaatggacatgcaatgtcc
tccgcttctctgacagacaaacaggctgacatacagactgacagacagactgacagacag
acagagccagtctgtcaggacctgccaatgcccagcactcagacagacacacagacggag
gtggagagacggacaaaggagacagaggggacggagtccatggaggacaggaaggagggt
gccccctgtggacagaaaccagaacctccttctcaaagcagcaagcccagcctggccagc
attaaacagagacacctgcagggaagctccgagaaatcaactgatggtataggatggaca
gagggagacagggtagaagaggagaataatgaaaagagacgtgagggtgtgcagaaagaa
agaggggcagaggggcagcggccccccattcctgaaaagcctggtagagataagacctct
ccaaagacactgcctcctgtcactccacctgaggaaaccaccaatgagaagaaaaccaca
cctcctgttccacctgcctctgccaagccctcttttgatttgtctcaagctcctgtcagt
caagacgaagggactaatgagaagaaaagccttcctcctgtgcctcctgcttctaccaag
cctgtgtttgactctcctgatcatgctggttgtcaagatgaggagggaggaagaaatggt
tatccactgaagccgcatcgcaacaggaaggcagactcatgtgacatgggtatgtgtgag
ggcatggaacggaatagccccaacgatctggagacggggtcctcagatcgcaaaccccct
gtgaaaagacccagactcccagagaacagaaacagatctctggacttccccaggactgtc
tgtcctgagagtccagagcccgccaacgacaatggtgtgacgtcgtcataa
DBGET
integrated database retrieval system
