Oncorhynchus tshawytscha (Chinook salmon): 112226701
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Entry
112226701 CDS
T05605
Name
(RefSeq) AP-1 complex subunit gamma-1
KO
K12391
AP-1 complex subunit gamma-1
Organism
otw
Oncorhynchus tshawytscha (Chinook salmon)
Pathway
otw04142
Lysosome
Brite
KEGG Orthology (KO) [BR:
otw00001
]
09140 Cellular Processes
09141 Transport and catabolism
04142 Lysosome
112226701
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
otw04131
]
112226701
Membrane trafficking [BR:
otw04131
]
Endosome - Golgi transport
Others
AP-1 complex
112226701
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Adaptin_N
Alpha_adaptinC2
Cnd1
DUF11
Peptidase_M73
Dopey_N
Motif
Other DBs
NCBI-GeneID:
112226701
NCBI-ProteinID:
XP_024246966
LinkDB
All DBs
Position
LG28:11342600..11356000
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AA seq
790 aa
AA seq
DB search
MSPSVRLQEMIRVIRGARTQGEERGVIQRECAAIRAQFRQADNGTRSHNLAKLLYVHMLG
YPAHFGQMECVRLIASPRYNEKRVGYLGAMMLLDEKQDASLLITNSIKNDLSHSSQYVQS
LALCTLGCMGSAEMCRDLAPEIDRLLRASNSYIKKKAALCAVHIVRKVPELGELFTPASR
SLLSEKNHGVLHGAVVLITELCERNPETLEQFRKAVPELVQIMKGLVMSGYSPEHNVAGI
SDPFLQVRILRLLRILGRNNETASDAVNDLLAQVATNTDSSKTAGSAVLYETVLTVMDIK
SESGLRVLAVNILGRFLLNNDRNIRYISMTSLQKIVQTDHNAVQRHRGTIVDCLKDQDAS
VKRRALELSLALVSAVNIRSLMKELLLFLSSCPPELRAHTTSGIFNAAERYAPSQRWHID
TILHVLTTAGGDVRDETVPNLIQLITTATELHCYTVHKLYRALIADISVQSLVQVACWCI
GEYGDLLLRGECEETEPVQVAEDDVLDALETVLQSHMSSPATRGFALTATMKLSTRITHN
VDRIRSIVSIYGSCIDVELQQRAVEYNALFKKYDHMRAAVLERMPVIDKSSPGHTNGESA
GGSIKEMEPTKRTQEVVLPQEPANQVCDLLDLLGGSGEPPQPSPALSTTALGPVSSTAGG
DLLDLLGGLDVTPVPPSVIVYEKNGVTLKLQTDRQTDTGMTITLTATNSTDREITSLTLQ
AAVPKSVQLQMKAPSGDVIPAHGLGQVTQTVLLNNPNKVSLKMRVRVCYTSQDFVCQDTV
QIDSFPSPAW
NT seq
2373 nt
NT seq
+upstream
nt +downstream
nt
atgtctccgtctgtgcgcctgcaggagatgatcagggtgatcagaggagcccgtacacag
ggagaggagcgtggtgtgatccagagggagtgtgctgcaatccgggcgcagttcagacag
gctgacaatgggacgcgctctcacaatctggcaaagctgctgtatgtgcacatgctgggt
taccccgcccacttcggtcagatggagtgtgtgcgtctgattgctagccctcggtacaat
gagaagcgtgttgggtacctgggtgccatgatgcttctagacgagaagcaggatgctagc
cttctcatcactaactccatcaagaatgacctgtcccacagcagtcagtatgtccagtct
ctggctctgtgtactctgggctgtatgggctcagctgagatgtgtcgagacctggcccca
gagatcgaccgcctcctcagagcctctaactcctacatcaaaaagaaggccgctctttgt
gcggtgcacattgtgaggaaagtaccagaactaggagagctgtttacccctgcatctcga
tccctgctctctgaaaagaaccacggagtgttacatggagctgtggttctgatcactgag
ctgtgtgagcgcaacccagaaacactagagcagtttcgcaaggcggtgccggagctggtc
cagataatgaaaggcctggtgatgtctggttactctccagaacacaacgtggctggtatc
agtgaccccttcctacaggtgcgcattcttcggttgctgaggatcctgggtcgtaataac
gaaacagctagtgatgccgtgaatgacctgctggcccaggtggccacgaacacagacagc
agtaagaccgcaggcagtgctgtgttgtatgaaacagttctcactgtcatggacatcaaa
tcggaaagtggcttgagggtcctagctgtgaacatcctggggcgatttcttctgaacaac
gataggaacatccggtacatctcaatgacttccctacagaagattgttcagacggaccac
aatgcagtgcagcgtcacagagggaccatagtggactgcctgaaggaccaggatgcttct
gtcaaacgccgggcactggagctttctctggccctggtgtcagccgtcaacatccgctct
ctgatgaaagagctgctcctcttcctctccagctgtcccccagagctcagagcacacacc
acctcgggcatcttcaacgctgcagagaggtatgctccctctcagcgctggcacattgac
accatcctgcatgtcctcaccacggcagggggcgacgtgagggacgagactgttcccaac
ctgatccagctcatcaccacagcgacagaactccactgctacacggtccacaagctgtac
agagccctgattgcagacatctcagtgcaatccctggtacaggtggcatgctggtgtatt
ggggagtatggagacctgcttctgagaggcgagtgtgaggagacagaacctgttcaggtg
gcagaggatgacgtcctggacgccttggaaacggttctacagtcgcatatgtcgtcgccg
gcaaccaggggcttcgctctcacagcgacaatgaaactcagcacacgcataacacacaac
gtggatcgcattaggagcatcgtcagcatctacggcagctgcatcgacgtggaactccag
cagagggcagtggaatacaacgctctgtttaagaaatacgaccacatgagggctgccgtt
ctggagagaatgccagtgattgacaagagctcaccgggacataccaatggagaatcagca
ggggggtctatcaaagagatggagccaaccaaacggacacaggaagtagtattaccccag
gaacctgctaaccaggtgtgtgatctgttggacctgctaggtggttctggggagcctccc
caacccagccccgccctgtccactacagcgctaggccctgttagcagcacggctggggga
gacttactggacctgctgggaggcctggacgtcacacctgtgccacctagtgttatagtg
tatgagaagaacggcgtgacactgaaactacagactgacagacagacagacacgggcatg
accattaccctcactgccaccaactctactgacagggagatcaccagcctcaccctgcaa
gcagcagtacccaagagtgtccagttacagatgaaggctccgagtggtgacgtcatcccc
gcacacggcttaggtcaggtgacccagactgtgctcctcaacaaccccaacaaggtgagt
ctgaaaatgagggtgcgcgtgtgctacaccagccaggactttgtctgccaggacacggtg
cagatcgactcatttcccagccccgcctggtaa
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