Oncorhynchus tshawytscha (Chinook salmon): 112226717
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Entry
112226717 CDS
T05605
Name
(RefSeq) heterogeneous nuclear ribonucleoprotein C isoform X1
KO
K12884
heterogeneous nuclear ribonucleoprotein C1/C2
Organism
otw
Oncorhynchus tshawytscha (Chinook salmon)
Pathway
otw03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
otw00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
112226717
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
otw03041
]
112226717
Spliceosome [BR:
otw03041
]
Common components
Common spliceosomal components
hnRNP proteins
112226717
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
Cwf_Cwc_15
Motif
Other DBs
NCBI-GeneID:
112226717
NCBI-ProteinID:
XP_024246989
UniProt:
A0A8C8EW22
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All DBs
Position
LG28:11716387..11739131
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AA seq
316 aa
AA seq
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MDLSPTTSSLMASNVTNKTDPRSLNSRVFIGNLNTLLVTKADVEAIFSKYGKIVGCSVHK
GFAFVQFANERCARAAVGAEDGRMIVGQVLDINLAGEPKPHRSKTAKRSAGEMYRSDSIS
PTFDLDYDFQRDYYDRVYSYPSRVPPPPPPLSRAVIPSKRPRISMTGGGSRRSKASFSYS
SKSSQRASSRTMKTDDLQTIKKELTIIKHKVDYLLESLDRMEKDHSKKSDEKGAKPEPGQ
VSSQQHCSIKKEESIEREDLNDSEEEGDLLEEEEVKSQQREEEEDDDDDDDEEEEEEGEH
VDGDDDGDSVNGDEDS
NT seq
951 nt
NT seq
+upstream
nt +downstream
nt
atggatctgtcccccaccaccagcagcctgatggccagcaacgtgaccaacaagacggac
ccgcgctcgctgaactcgcgggtctttatcgggaacctcaacacgctcctggtcaccaag
gcagacgtggaggcaatcttcagcaagtatggcaagatcgtgggctgttctgtgcacaag
ggctttgccttcgtccagttcgccaacgagagatgtgcccgggccgctgtaggggccgag
gacggacgcatgatcgtgggacaggtgctggacattaacttggctggagaacccaaaccc
cacaggtcaaagaccgcaaagcgctcggcgggagaaatgtacaggtctgattcaattagt
cccacgtttgatctggactatgacttccagagagattactatgaccgtgtgtactcgtac
ccatcccgtgtgccccctcctcctccacccttgtcccgagcagtgatcccgtccaagcgc
ccgcggatcagcatgactggagggggcagccgccgcagcaaggccagtttctcctattcc
tccaagagcagccagagggcatcctcaagaacaatgaaaacagatgacctgcagaccatc
aagaaggagctgacaataattaaacacaaagtagactacctgctggagagcctagaccgc
atggagaaggaccacagcaagaagtcagatgagaagggtgcaaagcctgagcctggacag
gtgtcctcacagcagcactgcagcatcaagaaggaggagagcatcgagagggaggatctc
aacgactctgaggaggagggggatctgctggaagaggaggaggtgaagagtcaacaaaga
gaggaggaggaggatgatgatgatgatgatgatgaagaggaggaggaggaaggagagcat
gtggatggagacgacgatggtgacagtgtcaacggagatgaggactcttag
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