Oncorhynchus tshawytscha (Chinook salmon): 112226800
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Entry
112226800 CDS
T05605
Name
(RefSeq) acid-sensing ion channel 1C-like isoform X1
KO
K04830
acid-sensing ion channel 3
Organism
otw
Oncorhynchus tshawytscha (Chinook salmon)
Brite
KEGG Orthology (KO) [BR:
otw00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
otw04040
]
112226800
Ion channels [BR:
otw04040
]
Ligand-gated channels
Acid-sensing ion channel (ASIC)
112226800
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GFIT
Motif
Pfam:
ASC
Motif
Other DBs
NCBI-GeneID:
112226800
NCBI-ProteinID:
XP_024247124
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Position
LG28:complement(14727289..14913142)
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AA seq
523 aa
AA seq
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MKGDSEESIESIRPSNLQAFANMSTLHGMSHIFAYGHMTFRRFLWTLSFLGSLALLMLVC
MDRVSYYFEYPHVTKLDEVAAPNLTFPAVTFCNLNEFRFSKITRNDLYHVGELLALLNSN
YQIANTHLAEPEVLAALKDKANFLNFKPKQFNMTDFYNRTGHDISDMLLQCTFRGSECYP
RNFSTIYTRYGKCYTFNSGLDGNPLLTTLKGGTGNGLEIMLDIQQDEYLPVWGETDETSY
EAGIKVQIHSQDEPPFIDQLGFGVAPGFQTFVSCQQQLLQYLPPPWGDCKSTPIDSEFFS
TYSITACRIDCETRYLVENCNCRMVHMPGTSMVCTPEQYKDCADPALDFLVEKDNDYCVC
ETPCNMIRYGKELSMVKIPSKASAKYLAKKFNKTEQYIGENVLVLDIFFEALNYEKIEQK
KAYEIAGLLGDIGGQMGLFIGASVLTILEIFDYLYEVFKDKVLGYFMRKKRPQRCPSDNL
EFPENPTSPGVTPNHAPRAPVTPSGVTRTVSDSHRTCYLVTRL
NT seq
1572 nt
NT seq
+upstream
nt +downstream
nt
atgaagggggactcggaggaaagcatcgagagcatccggccttccaacctgcaagccttc
gccaacatgtccactctacatggcatgagccacatctttgcctacgggcacatgacgttt
cgccgcttcctgtggacgctctccttcctgggctcgttggccttgcttatgctggtgtgc
atggaccgcgtctcctactactttgagtatccccacgtcaccaaactggatgaggtggca
gcacccaacctcaccttccctgctgtgaccttctgcaacctcaacgagttccgcttctcc
aagatcaccaggaacgacctgtatcacgtgggggagctcctggccctcctgaactccaac
taccagatagccaacactcacctggctgagcctgaggtgctggctgccctcaaggataag
gccaacttcctcaacttcaagcccaagcagttcaacatgacagacttctacaaccgcacg
ggccacgatatcagtgacatgctgctgcagtgcacgttccggggatcggagtgttaccca
aggaacttcagtaccatttacacgcggtatgggaaatgctacaccttcaactctggcttg
gacggcaacccgttgttgacgacgttaaaaggcgggacaggaaacgggctggagatcatg
ctagacattcaacaggacgaatatttacctgtttggggagagacagacgagacctcgtac
gaagcaggcatcaaggttcagatccacagccaggacgagcctcctttcattgaccagctg
ggatttggtgtggcccctggttttcaaacttttgtgtcatgtcagcagcaactgcttcag
tacctccctcccccttggggagactgcaagtccactcccatcgactccgagttcttctcc
acatacagcatcacagcctgccgtatcgactgtgagacacgctacctggtggagaactgt
aactgcaggatggtccacatgccggggacctcaatggtatgcacacccgagcagtacaaa
gactgtgcagacccagctttagacttcttggtagaaaaggacaatgactactgtgtgtgt
gagacaccatgcaacatgatacgctatggcaaggagctgtccatggtgaaaatacccagt
aaagcctctgccaaatatctggccaagaaattcaacaaaactgagcaatacatcggagaa
aacgtactagtcctggacatcttctttgaggcgttgaattatgagaagattgagcagaag
aaagcgtatgaaattgcagggttgcttggtgacatcggaggtcagatgggtctgttcatt
ggagccagtgttttaacgatactggaaattttcgactacttatatgaggtatttaaggat
aaggttttgggttacttcatgcgcaagaagcgaccacagcgttgtccgagcgacaatctg
gagtttccagagaacccaaccagccctggtgtcacgcctaatcatgcccccagagcacct
gtgacaccctccggagtcactcggacagtctcggattcacaccgaacatgttacctcgtc
acccgactctag
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