Oncorhynchus tshawytscha (Chinook salmon): 112226803
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Entry
112226803 CDS
T05605
Name
(RefSeq) arf-GAP with GTPase, ANK repeat and PH domain-containing protein 3 isoform X1
KO
K12491
Arf-GAP with GTPase, ANK repeat and PH domain-containing protein 1/3/4/5/6/9/11
Organism
otw
Oncorhynchus tshawytscha (Chinook salmon)
Pathway
otw04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
otw00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
112226803
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
otw04131
]
112226803
Membrane trafficking [BR:
otw04131
]
Endosome - Golgi transport
Arf GTPases and associated proteins
Arf GTPase associated proteins
112226803
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
ArfGap
Ras
Ank_2
PH
Ank
Ank_4
Ank_5
Roc
PH_6
Ank_3
DUF908
Motif
Other DBs
NCBI-GeneID:
112226803
NCBI-ProteinID:
XP_024247130
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All DBs
Position
LG28:complement(14980327..15216828)
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AA seq
1389 aa
AA seq
DB search
MLLLSSQATERTIPGATSKAVTAHQSGGGKTAVDHISVILNGTLGREEVGSRSVAGQAAR
YAPLEQSHPAAGSTRARQQALQGEEGRFSLGRIRQDLGRWPSLSHTGRVERRREDAVQEE
EDGGEMTTDRFLQLQQPSNNSAAPAAAQPSQSNWETTAVGVEVDTATAAPEQQKIQVETQ
GQDISPQYEGSLLGHNGGVLAGGGRLPRAVLRRKPSQDSAAPDSRRVVSMYGAPAWQQRG
SLSDQDRTDKPRRPRSVCMLGGPNLNPALLQPGSHRSHSQQSSRRVATGSLDGPPQQCWT
RRAELRAVDGLKPGVLPQRTVAEEKVVPRVRQQKQRPVSMTMLELRKKASGSQDELDSHR
GSQVRGLFGRWRIFGRPAQDKEKDKEGARAPGSKPPSRLDVPKKTLSSLRRSLSLRIRRN
RPRGRVEISEVTAEERSRTKSIGQETSLPSRPFSYLTGRSLPPAYERDNDGGMQNIQYHS
QGKVKVMEVPLYPARLSSSTKPAHEEPSVWQLIASRFRRKEQQQPPNGKCKLQPQPLSKE
TGKYPLAGNKKPQLVSIETLAGIDCSKGQDSFVNSQEWTLSRSVPELKVGIVGNLSSGKS
ALVHRYLTGTYVQEESPEGGRFKKEMVVDGQSYLLLIRDEGGPPELQFAAWVDAVVFVFS
LEDEISFQTVYNYFLRLSSYRNTAEVPMVLVGTQDAISAANPRVIDDSRARKLSNDLKRS
TYYETCSTYGLNVERVFQDVAQKVVALRKKQQLSIGPCKSLPNSPSHSSVPNASLPSVHI
NQAANGGVVFSDYSSSVPSTPSISQREMRIETIAASNTPTPIRKQSKRRSNIFTSRKANS
EQAKTTDSKTDSIGSGRAIPIKQGILLKRSGKSLNKEWKKKYVTLCDNGLLTYHPSLHDY
MQNVHGKEIDLLRTTVKVPGKRPPRAVTTIAPTASPKTNGLTKDRSTLQLGVGTTGAPHS
NSNTSLQSERSVSGGGLVGFGGSKDSMHQRSFSVSSADQWNEAVINTSASTGAANGMSEP
LTCSSGVGSATSPKLEPPPSPHANRKKHRRKKSTGITKPDGPSAGNEESEESFEFIIVSL
TGQMWHFEASTFEERELWVTAIESQIFASLQSCESMKNKSRLGSQSDAASIQSIRNVRGN
SICVDCDAANPDWASLNLGALICIECSGIHRNLGTHLSRVRSLDLDDWPVGLSMVMMAIG
NAMANSVWEGALEGYTKVGADSTREERERWIRAKYEQKLFLVGLPQSDVPLGQQLLRAVV
EDDLRLVVLLLAHGTKEEVNETYGDGDGRTALHLSCAMANVVITQLLIWYGVDVKSRDAR
GQTPLSCARRAGSQECSDILLQHGCPNDPVSSSSLTTPNMSRRNPNVNPNPNVNNNNALS
ELNRSVSIM
NT seq
4170 nt
NT seq
+upstream
nt +downstream
nt
atgctactactgagcagtcaggcaacggagcggactatccccggggccacaagtaaagct
gtcacagcccaccagtcaggaggaggtaagaccgcggtggaccacatttctgtcatcctg
aatggaactctgggccgtgaggaggtgggttcgaggtcggtggcgggccaggccgcccga
tatgccccactggagcaaagtcatcctgccgccgggagcactagggcacgacagcaggcg
ctgcagggggaggagggacgcttcagcctgggcaggatacggcaggatcttggcaggtgg
ccctccctgagccacacaggcagagtggagaggaggagggaggatgcagtgcaggaggag
gaggatgggggggaaatgacaacggaccggtttctccaactgcaacagccctccaataac
tcagcagctccagcagcagcccaaccttctcagtcaaactgggagactacagcggtagga
gtagaggtagatacagccacagcagctccagagcaacagaagatccaggtagaaacccag
ggacaggacatttctccccagtacgaagggtctctccttgggcataatggtggtgttctg
gccggtggtggccgtctaccccgggcagtgctccgcaggaagccatcccaggacagtgct
gcgccagacagcaggagggtggtgagcatgtatggagccccagcctggcaacaacgaggc
tcgctaagtgaccaggacagaacagacaaacccaggaggcccaggagtgtgtgcatgctg
ggaggccccaacctcaaccctgccctgttgcagcctgggtcccacaggtcccactcccaa
cagagctccagaagggtggctacaggatctctggacggtcccccccagcagtgctggacc
aggagggcagagctgcgggcggtggacggcctcaagccgggggtgctccctcagcggaca
gtggctgaggagaaggtggtccccagggtccggcagcagaaacagagaccagtcagtatg
acaatgttggagctgaggaagaaggcctctgggtctcaggacgagctggatagccatagg
ggaagccaggttagaggtctgttcggccgctggaggatctttggccgaccagcccaggac
aaggagaaggataaggagggagcccgagccccaggttccaagccccccagcaggctggac
gtccccaagaagaccctgagctccttacgccggagtctcagtttgcggatcaggaggaac
cggccgcgggggagagtggaaatatccgaagtgacagcagaggaacgctcacgcactaaa
agtatcgggcaagagacatctctcccctcgcggcccttctcctacctcaccgggaggtcc
ctgccacccgcttacgagagggacaatgatggagggatgcagaacattcagtaccacagc
cagggcaaggtcaaggtgatggaggtgcccctctacccagccagactgtcctcctccact
aaaccagcccatgaagagcccagcgtgtggcagctcatagccagccgctttaggaggaag
gagcagcaacaaccgcccaacggtaaatgtaaactccagccccaacccctgagcaaagag
actggcaaatatcccctggctgggaataaaaagcctcagttagtttccatagagactctg
gcaggcatcgactgcagcaaaggtcaagactctttcgtcaacagccaagaatggacattg
agtcgatcagtgccagagctcaaagtgggtattgtgggtaatctgtcgagcgggaaatcg
gcccttgtccaccggtacctgacaggcacatacgtgcaggaggaatcccctgaaggtggt
cggttcaagaaggagatggtggttgacggacagagctacctgctgctgatcagagacgag
ggaggccccccggagctgcagtttgcagcgtgggtagacgctgtggtgtttgtcttcagt
ctggaggatgagatcagtttccagacagtctacaactacttcctgcgtctgtccagctac
aggaacacagcagaggtccccatggtcctggtcgggacgcaagatgccatcagtgctgcc
aaccccagagtgatcgatgactcacgggccaggaagctgtccaacgacctgaagcgttcc
acctactacgagacctgctccacctacggcctcaatgtggagagagtcttccaagatgtc
gcccagaaggtggtggctctgaggaaaaaacagcagctgtctattggtccgtgcaagtcc
cttcccaactcgcctagccactcatcagtccccaacgcatccctcccctctgtgcatatt
aaccaggcggcgaatggcggggttgtgttcagcgactactcctcctcggtgccttccact
cccagcatcagccagagggagatgcgcatcgagaccatcgccgcctccaacacgcccaca
cccatccgcaagcagtccaagcgccgctccaacatcttcacatcacggaaagccaacagt
gaacaggcaaagaccactgacagtaaaacagatagtataggcagtggaagggccataccc
atcaaacagggcatccttctgaagagaagtgggaagtccctgaataaggagtggaagaag
aaatacgtcacactttgtgacaacggcctcctcacctaccacccaagtttacatgactac
atgcagaatgtgcacgggaaagagattgacctgttgaggaccacggtcaaggtgccaggg
aaacgaccacccagagcagtcaccactatcgcccccaccgccagccccaagacaaacggg
ctgaccaaggaccgcagcaccctgcagctgggcgtaggcaccacaggtgcgccccattct
aacagcaatacatccctccagtcagagcgttcggtcagcggaggaggcctggtgggcttc
ggtggcagtaaggacagcatgcaccaacgctccttctctgtttccagtgccgatcaatgg
aacgaggccgtcatcaacaccagtgcaagcaccggggccgccaacgggatgagcgagccc
ctaacctgtagctctggagtgggcagtgccaccagtcccaagctggagcctcccccctca
cctcatgccaaccgcaagaaacacagacggaaaaagagcacgggcatcaccaagccagac
gggccgtctgcaggcaatgaagagtcggaggagtcgtttgagttcattatcgtgtctttg
acgggccagatgtggcatttcgaggcgtctacgtttgaggagagggagctgtgggtcaca
gctatcgagagccagatctttgccagcctgcagtcttgcgagagcatgaagaataagtcc
cggttaggcagccaaagtgatgcagcatccattcagtccataaggaacgtgagagggaac
agcatctgtgtggactgtgatgcagccaacccggactgggccagtcttaacctgggggct
ctgatctgtatcgagtgttcagggatccacaggaacctggggacccacctgtcaagggtc
cgctccctggacctggatgactggcccgtggggctcagcatggtgatgatggctataggc
aacgctatggccaacagtgtctgggagggggccctggaggggtacaccaaggtgggcgct
gacagcaccagggaggagagggagcggtggatccgggctaagtatgagcagaagctgttc
ctggtgggtctcccccagtcggatgtgcccctggggcagcagctgctccgggccgtggtg
gaggatgacttgaggctggtggtgctgctgctggcccacggcaccaaggaggaggtcaac
gagacgtacggagatggggacggacgcaccgccctgcatctgtcctgtgccatggccaac
gtggtcatcacccagcttctcatctggtacggagtggacgtgaaaagtcgggacgcgcgc
ggccagacgccgctgtcctgcgcccggcgggcaggaagccaggagtgttctgacatcctg
ctccagcacggctgccccaatgacccggtcagcagcagcagcctcaccacccccaacatg
agccgcagaaaccccaatgttaaccccaaccctaacgtcaacaacaacaatgccctcagt
gagctcaaccgcagtgtcagtataatgtag
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