Oncorhynchus tshawytscha (Chinook salmon): 112226815
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Entry
112226815 CDS
T05605
Name
(RefSeq) zinc finger protein 271-like
KO
K09228
KRAB domain-containing zinc finger protein
Organism
otw
Oncorhynchus tshawytscha (Chinook salmon)
Pathway
otw05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
otw00001
]
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
112226815
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
otw03000
]
112226815
Transcription factors [BR:
otw03000
]
Eukaryotic type
Zinc finger
Cys2His2 others
112226815
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-C2H2
zf-C2H2_4
zf-C2H2_3rep
zf-C2H2_6
zf-H2C2_2
zf-C2H2_jaz
STAT_bind
GAGA
Zn-ribbon_8
zf-C2HE
Motif
Other DBs
NCBI-GeneID:
112226815
NCBI-ProteinID:
XP_024247164
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All DBs
Position
LG03:complement(8881665..8893681)
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AA seq
705 aa
AA seq
DB search
MDYVSSAEPDVDAFICTECGDGFRRYLDLVKHITVHERLRTYERTDSFSLDSLPNGFQVP
REYALHENGTFIVVDRSGPSNNPSVKQPSSTPSPYQNSKTIVLTTKPAKTDLRVNTVSHS
QCRSVSPLKQYRCETCGKSFNNKLSLQHHQQYRNLEQGFKCTLCCKIFRDKERLREHLQE
HAHEIFYCCDQCGKRFLKQETLYAHQKEQHGSLGFKQMGKSDNSQENIIQKTYPCKKCNL
CFFWLSDMQSHLLSHSKDKPLSVNSSSKIEQQSQKDERSHTIEYSDSTPTTDETKQYSSG
TPTTDVTKQYSSGTPTTDVTKQYSSGTPTTDVTKQYSSDATVDVKTHNGKSDSKTPSSFR
PYRCGLCGDRFQQLTDLKEHHLTHQTQEEIDKLNKDSESQRVVKKWQRYTRIECIVTKAP
ARKGGRPPLYKKGSGTKLHPCKHCHRVFSHSSSLSRHNRSHKGTLHTCVLCGKHFPQRCD
VRRHIAMYHKPELEKKPSLKYLALHSKPDGGSQLNSDVLEQNVSSKIKPKKSLDRVVAEL
DSDNGEDQQTTSTGEVSAAPKVRRNYKCDQCGKKFGLLCVYQRHLRYHKREPGSEMVKCP
HCPSRFRSSSALRRHLEIHPSQSRGEMDMEGRASPTADSNPDLDSDQDNVKDLVGHGDID
DVKGGNGEKIGPAEVLYECTECTETFSSLQKFLKHQSSHGSDNLG
NT seq
2118 nt
NT seq
+upstream
nt +downstream
nt
atggattacgtaagctctgctgaaccagatgttgatgccttcatctgcacagaatgtggg
gatggcttcaggcgctaccttgacttggttaaacacattactgttcatgaacgactcagg
acttatgaacgaacagattcattttcccttgacagtttgcccaatgggtttcaagttccc
cgtgagtatgctctccatgaaaatggaactttcatagtggttgacagatctggaccatca
aacaacccttctgtcaagcagccatcttcaactccttcaccttatcagaattcaaagacc
attgtacttacaactaagccagccaaaactgatctacgtgttaacacagtatctcactcc
cagtgccgcagtgtctctcctctaaaacagtaccgatgcgaaacatgtggaaaatcgttt
aacaacaagctgagtttacaacaccatcaacagtatcggaatttagagcaaggttttaaa
tgcacgttgtgttgcaagatcttcagagataaagagaggctaagggaacatctccaagaa
catgcccatgaaatattttactgctgtgatcagtgtggaaaacgctttctgaaacaagag
accctgtatgctcatcaaaaagagcagcatggatcgctggggttcaaacaaatggggaag
tcagacaatagtcaagagaacataatacagaaaacatatccctgtaagaagtgtaatctg
tgttttttctggctctccgacatgcagagccacttactcagtcattccaaagacaaacca
ttatctgtgaactcttcatccaaaatcgagcaacagtctcagaaagatgagcgatcacat
accatagagtacagcgacagcaccccgactaccgatgagaccaaacagtacagcagcggc
acccctactaccgatgtgaccaaacagtacagcagcggcacccctactaccgatgtgacc
aaacagtacagcagcggcacccctactaccgatgtgaccaaacagtacagcagtgacgca
actgtcgatgtgaagacccacaatggcaaatcggattccaaaacaccatcctctttcaga
ccataccgctgtggtttgtgtggagatcgcttccagcagttaacagacttgaaggagcat
catcttacccatcaaacacaggaagaaattgacaagttaaataaggattcagagtcacaa
agagttgtaaaaaagtggcaaaggtatactcgcattgagtgcatcgtaacaaaagcacct
gcaaggaagggaggaaggcccccactttataaaaaaggctctgggacaaaattgcatcca
tgcaagcactgccaccgtgttttcagtcactcaagtagtctgtctcggcacaatagatcc
cacaaggggactcttcacacttgtgttctctgtgggaaacattttccacaacgctgtgat
gtccggaggcatatagccatgtatcacaaacctgaattagagaagaaaccaagtcttaag
tacttggcattgcattctaaaccagatggtggttcccaattgaattctgatgtgttggaa
cagaatgtgtcatctaaaataaaacccaaaaagtctttagaccgtgttgttgcagaattg
gacagtgacaatggtgaagatcaacaaaccacatctactggagaagtgtccgctgctcct
aaggtacggaggaactacaagtgtgaccaatgtgggaaaaagtttggactgctgtgtgtg
taccaacggcatttgcggtaccacaaaagggaaccaggtagtgaaatggttaagtgccct
cactgtccaagtcgcttccggagttcttctgctctaagacgccatcttgagattcaccca
agtcagtcaaggggggaaatggacatggaaggacgggcatctcccactgctgactccaat
ccagacctggactctgaccaagacaatgtaaaggatttagtgggtcatggggacattgac
gatgtcaagggtgggaatggtgaaaaaattggtccagcagaggtgctgtacgaatgcact
gagtgtacagagactttttcctccctgcagaagtttctgaagcaccagagttctcatggg
tccgataaccttggctaa
DBGET
integrated database retrieval system
