Oncorhynchus tshawytscha (Chinook salmon): 112226846
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Entry
112226846 CDS
T05605
Name
(RefSeq) desmoglein-2
KO
K07597
desmoglein 2
Organism
otw
Oncorhynchus tshawytscha (Chinook salmon)
Pathway
otw04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
otw00001
]
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
112226846
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
otw04515
]
112226846
Cell adhesion molecules [BR:
otw04515
]
Cadherins
Major cadherins
112226846
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cadherin
CADH_Y-type_LIR
Motif
Other DBs
NCBI-GeneID:
112226846
NCBI-ProteinID:
XP_024247214
LinkDB
All DBs
Position
LG28:complement(17616741..17624508)
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AA seq
1172 aa
AA seq
DB search
MARVETVVILLPFILTFICVVAVESGGLNLRRQKREWIIPPRKLKENVDYRNREYIAKIR
SDAEYKSRVTYSLTGIGADQNPMNLFHVNLDTGFVTIRGILDREEIASYHLLGVAMYNNG
SRAEKDIELNILVEDQNDCPPVFVFGQSGSVNESSAAETVVMKVTATDADQVNTLHSQIY
YSIVEKSASDKMFAINYKTGEILVRRTTLDRETQDTYTLTVKGSDMNGAFGGNTGTAEVV
IKILDINDNIPTLEKESYEGSVEENTVGVEVLRIKAIDLDLMYTENWLSVFTIITGNEAG
YFNITTDAKTNEGIIWITKALDYEELKVLNLAIRVSNKAEYYFGSSKGRVDIGNAKTYPI
KINVINQKEGPKFKPTVKVVTISEDSSLVTINKVITTYTAIDSDTLQIATNVRYAKIYDE
DHWLMIDEKTAEIKLNKLPDRESKYLVNGTYYAKIIAITTDLPSKTATGTIAIQVEDFND
HCPTLTATTTTMCLGDTAVYVMAVDGDAFPNGAPFKFRVIQDDSKQKWMVEHLNDTTAIL
RDHAHMWPGHYKVAVEISDQQGKACADIQVLNVVVCTCDQVNKVCIERRTGTDITLGAPA
ILLLLLGLLLLLLVPLLLLFCLCGGAAAIGDFKPIPFDTKEHLIAYHTEGQGEDKEVPLL
NVPVEVEHGHIKTVNVGKYGGNAGFIGRVGEIGGAAGGVSGDGFTSSSMFTGAHQQYHGF
HQPSGRLEVDYGMGGGIMTEQHEHSMFSRLPAGAYDGMALSEEVLEEYYSAKANHTAQID
QQRDALLIYDYEGQGSPVGSVGCCSLLGADDDLDFLNDLGHKFKTLAQICQGSIAMEAET
VNVSVSPTHPRPTTSIHTEVSRNTALNVNTLNTSVTTSTTSVPLQESLITRDQGSVTIPR
SHIQENVVIPRQTVLIQQPTMYYAAAPTMYMVEPQPQLLLVEQRGGGGYVHAQQVVGHVG
VGTGQRMVQTGGLHGSQGMLLVEKQMGVGGGGGGHGHVVTGGGQFLQGAGQTTTGGGHII
TEMSQTITQGGQILQGAGQTMIGGGHLSPGGSFSQGSRKVLVVESGSGPASAVGGSAGLW
APQVTLQRGQGSSSTFSSGGHSVEVIGQRGASTLTSSSLCGSMGSNQASAAAVTVATTPM
PTAAPRSRSHTAVVQEKKSSVTEKYTETSTIA
NT seq
3519 nt
NT seq
+upstream
nt +downstream
nt
atggcccgtgtagaaactgttgttatattgttgccgttcatactaacgtttatatgtgtg
gtggcagtagaaagcggcgggctgaacctgagaagacagaagagagaatggatcattcct
cctcggaagttgaaggagaatgtggattacaggaacagggaatacatcgcaaagattcgt
tctgatgcggagtacaagtcaagagtgacgtactcactgaccgggatcggtgcagaccaa
aaccctatgaacttattccacgtcaacctagatacaggctttgtcacaatcagaggcatt
ctggacagagaggagatcgcttcctaccatttacttggagtagcgatgtacaacaatgga
agccgtgcagagaaggacattgaactcaatattttagttgaggaccagaatgactgccca
ccagtgttcgtttttggccaatctggatccgtcaatgagtccagtgctgcagagaccgtt
gtcatgaaagtgactgccacagatgcggatcaagtgaacactctacactctcagatttac
tacagcatagtggagaagagtgcttcagataaaatgttcgccatcaactacaagactgga
gagatactggttcgcaggactacactggacagagagactcaagacacctacaccctgact
gtaaaaggttcagacatgaacggagcattcggaggaaacacaggaacagcagaagttgtg
attaaaatcctggacatcaatgacaacatccccaccctggagaaagaatcttacgagggc
agtgtggaggagaacacggtcggtgtggaagtactgaggatcaaagccattgatctggat
ctgatgtacactgagaactggctgtctgtgttcaccatcatcacaggcaatgaggccggc
tacttcaacatcaccacagacgctaagaccaacgaaggcattatatggataaccaaggca
ctggactatgaggagctgaaagtgctcaaccttgccatacgtgtttccaacaaagcagag
tactactttggctcctccaaaggaagagtggatataggaaacgctaagacttaccccatc
aagatcaacgtgatcaaccagaaagaggggcccaaattcaagccaacggttaaagtggtg
accatctctgaggactccagcttggtcaccattaacaaggttatcactacctacacagcc
atcgacagcgacacattacagatcgctaccaatgtcaggtatgccaaaatatatgacgaa
gaccactggctgatgatagatgaaaagacagcggagatcaagctgaacaaactccctgat
cgggagtccaaatacctggtcaatggaacatactacgccaagataatagccatcacaacg
gatctgccatccaaaacggccacagggacaatagccatccaggtggaagactttaacgac
cactgtcccacgctgacagctacgactacgaccatgtgtctgggggataccgctgtgtac
gtcatggctgtggatggggatgccttccccaacggagctcccttcaagttcagagtgatt
caggacgacagcaaacagaagtggatggtggagcacctcaatgacaccactgccatttta
cgagaccatgcccatatgtggccaggtcactacaaggttgctgtggagatcagcgaccag
caggggaaggcctgtgctgacatccaggttctgaacgtggttgtatgtacctgtgatcag
gtcaataaggtctgcatcgagcggcggacgggcactgacatcacgttaggagcccctgcc
atcctgctgctcctcctgggcctcctgctgttgctgctggttcctctcctgctgctgttc
tgtctatgtggaggagcagcggccattggagactttaagcccatcccgtttgacactaaa
gaacacctgattgcatatcacactgaaggacaaggagaagacaaggaagttcctctcctg
aacgttcctgtggaggtggagcatggccacatcaaaactgtgaatgtagggaagtacggg
ggaaatgcgggattcataggaagagtaggggagataggaggagcagcaggaggcgtgtca
ggggacggcttcacctcatcctcaatgttcacaggagcgcatcaacagtaccatggcttc
caccagcccagtggcagattagaggtggactatggcatgggcggaggaatcatgacagaa
cagcatgaacactcaatgttctccagattacctgctggtgcttacgacgggatggcactc
tctgaggaagtcttagaggagtactactctgcaaaagccaatcacactgcgcagatcgac
caacagagagatgccctgctgatttacgactatgaaggtcaggggtcaccggtagggtct
gtgggctgctgcagtctactgggggctgatgatgacttggacttcctcaacgacctgggg
cacaagttcaagaccctggcccagatctgccaggggtcgatagctatggaggcggagact
gtcaatgtgtctgtgtcacccactcatcctagacctaccacatccattcacacagaggtc
agcagaaatactgctctcaatgtcaataccctgaacacctccgtcaccacctccaccacc
tccgtccccctacaggagagcctgattactcgggaccagggatcagtcaccatccccagg
tctcatatccaggagaacgtggtgatccccaggcagaccgtcctcatccagcagcccacc
atgtactatgccgctgcccccaccatgtacatggtggagcctcagccccagttgttgctg
gtggagcagagaggaggaggtggttatgtccatgcccagcaggtggtaggccatgtgggg
gtagggaccggtcagcggatggtgcagacaggagggctccatggttctcagggtatgctg
ctagtagagaagcagatgggggtgggtggtggtgggggaggccatggtcatgtcgttacg
ggcggaggccagttcttacagggagccggccagactactactgggggaggtcacattatt
acagagatgagccaaaccattacgcagggaggccagattctacagggggcagggcagacc
atgattggaggaggccatctctcgccaggaggaagcttctcacagggttctaggaaagtg
ctggttgttgagagcgggtccgggccagcctcggcagtagggggcagtgcaggcttatgg
gcaccccaggtcaccctgcagagaggccaggggtcatcctccaccttttcctcaggtggt
catagtgtagaggtgataggtcagaggggtgcttccaccttgacctccagctccctgtgt
ggctcgatggggtcaaatcaggcctctgctgctgctgtcacagtcgccaccacacccatg
cccacggctgcaccacgtagcaggagccacaccgctgttgtgcaagagaagaaatcctct
gtcactgagaaatacactgagaccagtactatagcgtag
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