Oncorhynchus tshawytscha (Chinook salmon): 112226849
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Entry
112226849 CDS
T05605
Name
(RefSeq) cadherin-2
KO
K06736
cadherin 2, type 1, N-cadherin
Organism
otw
Oncorhynchus tshawytscha (Chinook salmon)
Pathway
otw04514
Cell adhesion molecules
Brite
KEGG Orthology (KO) [BR:
otw00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecules
112226849
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
otw03036
]
112226849
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
otw04515
]
112226849
04090 CD molecules [BR:
otw04090
]
112226849
Chromosome and associated proteins [BR:
otw03036
]
Eukaryotic type
Centrosome formation proteins
Other centrosome associated proteins
112226849
Cell adhesion molecules [BR:
otw04515
]
Cadherins
Major cadherins
112226849
CD molecules [BR:
otw04090
]
Proteins
112226849
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cadherin
CADH_Y-type_LIR
Cadherin_pro
DUF2304
Stevor
CD34_antigen
Motif
Other DBs
NCBI-GeneID:
112226849
NCBI-ProteinID:
XP_024247218
LinkDB
All DBs
Position
LG28:17929557..18011881
Genome browser
AA seq
914 aa
AA seq
DB search
MYFYEGRGLLLLTLLAALQIATESRGTLPLCRPGFSEDVYVAVVPESAEKGQPLFNVKFV
NCGRGGLVRFECSNPFDFRIEADGVVYALRPLTLSTLPTVPLVIIARDKTNQQQWQTQVR
LTPPVGQDQQAQDIQAPPARSQGLQEIWFPSRQTDSSSIGQLKRMKRDWVIPPINVPENS
RGEFPQDLVRIRSDNDKNRSLRYSVTGPGADQPPTGIFIIHPISGELSVMKPLDREHISN
FHLRAHAVDLNGNQVESPIDIVINVIDMNDNRPEFIHQIWNGSVPEGSKPGTFVMTVTSV
DKDDPKTANGMLRYKIGSQNPESPTSNMFTINNKTGDIITVAAGLDREKVPQYTLIIQAT
DMEGNPMYGLSNTATAVIRVTDINDNPPEFTAEMFFGEVPENRVNVIVANLTVTDKDQPN
TLAWKAVYKITGGDPTGRFSVPTDPTTNEGLVTVVKPIDYEISRTYMLTVVAVNEVSLAR
GIHSPRQSTATVSIRVIDVNESPYFDPNPKLIKLEEGMLAESTLTTFTAQDPDRFMQQSI
RYTRLSDPANWLRIDANTGRITTIAVLDRESPYVKDNMYSATFLASDNGVPPASGTGTLQ
ISLLDINDNAPHVYPQETEMCKKPEPNGINITALDGDLNPNAGPFAFELANRPSDVRRNW
TITRLSGDYAQLNLKIGFLESGIYEIPIIITDSGNLPMSNTSYLRVKVCQCDHNGDCTDQ
QHIIAAGLGTGAIIAILLCIIILLILVLLFVVWMKRRDKERQAKQLLIDPEDDVRDNILK
YDEEGGGEEDQDYDLSQLQQPDTIEPDTIKPVGIRRMDERPLHPEPQYPIRSAAPHPGDI
GDFINEGLKAADNDPTAPPYDSLLVFDYEGSGSTAGSLSSLNSSSSGGDQDYDYLNDWGP
RFRKLADMYGGSDD
NT seq
2745 nt
NT seq
+upstream
nt +downstream
nt
atgtacttttacgagggcagaggactgcttctcctcacgctcttggccgctttgcagatc
gcaactgagagcagaggcacccttcctctgtgccggccggggttctctgaagatgtgtat
gtcgccgtggtgccagagagtgcagagaagggacagccccttttcaatgtgaagtttgtg
aactgcggccgaggtggactggtgcggttcgagtgcagtaacccgttcgacttccggata
gaggctgacggggtcgtctacgccctcaggcctttgaccttgtccaccctccctacagtg
cccctagttatcatagccagggacaagaccaatcagcagcaatggcagacccaagtgaga
ctgacgccccctgtaggccaggaccagcaggcccaggacatccaagctcccccagctcgg
tcccagggtctccaggagatatggttcccatcacggcagacagacagcagctccatcggc
cagctcaaacgcatgaagagagactgggtcatccccccaatcaacgttcccgagaactcc
agaggagagttcccccaggacctggtccggatccggtcggacaatgacaagaaccgatcc
ctgaggtacagtgtgaccggacccggagctgaccagccacccaccggcatcttcataatt
caccccatctctggagagctgtctgtcatgaaacccctggacagggaacacatatccaac
ttccacctgagagctcatgctgtggatctgaacggtaaccaggtagagagccccatcgac
attgtaatcaatgtgattgacatgaacgacaaccggccagagttcattcatcagatctgg
aacggctccgtccctgagggctccaaaccagggaccttcgttatgacggtaacgtctgtt
gacaaagacgaccccaaaacagccaatgggatgctgcgctacaagatcggatcccagaat
cccgagagcccgacatccaacatgttcaccattaacaacaagacaggagacatcattacc
gtcgcggctggcctggacagagagaaagtgcctcagtacacgttgatcatccaggccaca
gacatggagggcaaccccatgtacggcctgtccaacactgccacggccgttatcagggtg
accgacatcaacgacaacccaccagagttcactgccgagatgttctttggagaggtgcct
gagaaccgggtgaatgtcatcgtggccaacctgacggtgacggacaaagaccagcccaac
acgctagcgtggaaggccgtctacaagatcactggaggtgaccccactggcaggttctcc
gtgccaaccgaccccaccactaacgagggcctggtaaccgtcgtcaagccaatcgattat
gagatcagcaggacgtacatgttgacggtggtagcggtgaacgaggtgtctctcgcccgg
ggcatccactcccctcgccagtccaccgccacggtctccatcagggtcattgacgtcaac
gagagcccctacttcgaccccaaccccaaactcatcaaactggaggaggggatgttagca
gaatccacactgaccaccttcacagcacaagaccctgatagattcatgcagcaaagcatt
agatacaccaggctctcagacccagccaactggctgagaattgatgctaacaccgggcgc
atcacaaccatcgccgtcctggaccgcgagtcgccctacgtgaaggacaacatgtacagc
gccaccttcttggcctctgacaatggcgtcccaccagcgagcggtacaggcaccctgcag
atctccctgctggacatcaacgacaacgcgccccacgtctacccccaggagactgagatg
tgcaagaagcccgagcctaacggcatcaacatcacagcgctggacggagacctcaacccc
aacgccggacccttcgcgttcgagctggccaacaggccctcagatgtcagaagaaactgg
accatcacacggctcagtggtgattatgcccagttgaacctgaagattggcttcctggaa
agcggcatctacgagatccccatcatcatcactgactctggcaacctgcccatgtccaac
acatcctacctgcgggtcaaggtgtgccagtgtgaccacaacggggactgcaccgaccag
cagcacatcatcgccgcagggctgggcacgggagccatcatcgccatcctgctctgcatc
atcatcctcctcattctggtgttgttgtttgtggtgtggatgaagcgtcgtgataaggag
cgtcaggccaagcagcttctcattgacccggaggacgacgtcagagacaacatcctgaag
tacgatgaggagggaggtggagaggaggaccaggattatgacctgagccagcttcagcag
cccgacacgatagagccggacaccatcaagcccgtggggatccggcgtatggacgagagg
ccgctgcaccctgagccccagtaccccataaggtcagcagccccgcaccccggggacatc
ggagacttcatcaacgagggacttaaggcagcagacaacgaccccacagccccgccctac
gactccctgctggtgttcgactatgaaggcagtggctccacagccggctccctaagctct
ctcaactcctccagcagcggaggggaccaggactacgattacctcaacgattggggccct
cgcttcagaaaactcgcagacatgtacggagggagcgacgactag
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