Oncorhynchus tshawytscha (Chinook salmon): 112226855
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Entry
112226855 CDS
T05605
Name
(RefSeq) oxysterol-binding protein-related protein 1 isoform X1
KO
K20174
oxysterol-binding protein-related protein 1/2
Organism
otw
Oncorhynchus tshawytscha (Chinook salmon)
Brite
KEGG Orthology (KO) [BR:
otw00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
otw04131
]
112226855
Membrane trafficking [BR:
otw04131
]
Endosome - Lysosome transport
Rab GTPases and associated proteins
Rab associated proteins
112226855
Endoplasmic reticulum (ER) - Golgi transport
Others
Oxysterol-binding proteins
112226855
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Oxysterol_BP
Ank
Ank_2
Ank_4
Ank_3
Ank_5
PH
Motif
Other DBs
NCBI-GeneID:
112226855
NCBI-ProteinID:
XP_024247237
LinkDB
All DBs
Position
LG28:18695831..18736898
Genome browser
AA seq
973 aa
AA seq
DB search
MMDLSDPEEQLLHYAKTGSLSLIQCLLQLRIEQDLRLNINCRGKTKTSAGWTPLHLACYY
GHKDVVEELLKAGADVNLQNSMGDTPLHKAALAGRKEVVLLLLRYDASSTIINGKAQIPK
AVTEDDEINTMLEAAERRAERRQEEKLLEAAREGDVFTLSELLSRKRPPDIDCRDLQGNT
PLHCAAYRGQKQCVGKLLKCGASSSMKNKSDQTVFDLACSEEIKQILEGSRDQDTVSGVQ
KFEGLLWKSSRFLAWRSHWVVIQDGVLSWYPRQADAVADVRKQGAKALMKAHCRVKAWDK
CFFSLRCFDHSLHHFKVSSKTDPEAIRKRWLDALEEHTAYSSCNTTQEQTTEDEEGDEAT
LGDLTDSLQAAEVCQQKLETQVCIFLSMVKNEENNTLATPLLLKARETSDLSRETSSALH
FCLSLFSKQQEVWSLKLEQEVEKNKLLTEALQTLATEHQDLDQQSLCKGRRSSTLSTLTE
DDFYDALSESDDEHSLSLSGFLSVAGHSCEEEEEGEVKEEEREPSLFSSSTLRGPAAACD
MSGEVNHGDKKAQCNGVKKHRTSLPAPMFSRNDVSVWSILKKCIGMELSKIAMPVIFNEP
LSFLQRLTEYMEHTYLIHQANAATDSMERMKCVAAFAVSAVASQWERTGKPFNPLLGETY
ELIREDLGFRWMSEQVSHHPPVSAFHAEGLQEDFLFHGSIYPKLKFWGKSVEAEPKGIIT
LELPKCNEAYTWTNPTCCVHNIIVGQLWIEQYGNVEVINHKTGERCSLTFKPCGMFGKEL
HKVEGYILDKSKKKLCAIYGKWTECLYTVDAATFDAHKKNSEEKKSNTQTSVDEEPEEMP
LPDGDTVQVIPGSELIWRIVPRPDNSAQFYAFSTFAMQLNELEGGMKGVLPPTDCRLRPD
IRAMEKGDIDLASAEKKRVEEKQRLARKNRSKSTEEWKTRWFHQGSNPHIKAQDWLYSNG
YWERNYSLLPDIY
NT seq
2922 nt
NT seq
+upstream
nt +downstream
nt
atgatggacctgtcagaccccgaggagcagttactccactatgccaagactggaagcctc
tctctcatccagtgtcttctgcagctacggattgagcaagatctcagactcaacatcaat
tgcagaggaaagaccaagaccagtgcaggttggacacctctacatctggcctgctactat
ggacacaaagatgttgtggaggagttgctcaaggctggtgctgatgtgaatttgcagaat
agcatgggtgacacgcctctacacaaagctgccttagcaggaagaaaggaggtagttctg
ttgctgctgcgatatgatgccagttccactatcatcaacgggaaagcacagatccctaaa
gctgtcactgaggatgatgaaatcaacaccatgctggaggctgcagagagaagagctgag
aggagacaggaggagaaacttctggaggcggccagagagggagacgtcttcaccctgtct
gagctgctcagcagaaagcggcctcctgacatcgattgtagagacctgcaggggaacacg
cctttacactgtgctgcctacagggggcagaagcagtgtgttggaaagctgctcaagtgt
ggagctagctccagcatgaagaacaagagtgaccaaacagtgtttgacctggcctgcagt
gaggagattaagcagattctggagggcagtcgtgaccaggatacagttagtggtgtgcag
aagtttgaaggcctcctatggaagagttccaggttcctggcatggcgttcccattgggtg
gtcattcaagatggggtcctgtcctggtaccctagacaagctgatgccgtggcggatgtc
cggaagcaaggcgctaaggctctgatgaaagctcactgcagggtaaaagcatgggacaag
tgtttcttcagcctccggtgctttgatcacagtctccatcacttcaaggtgtcatctaag
acggatccagaggctatcagaaaaagatggctggatgccctggaggagcatacggcctac
agcagctgtaacactactcaggagcagaccactgaggatgaggagggggatgaagctaca
ctgggggacctaacagactccctccaggctgctgaagtctgccagcagaaattggagact
caagtgtgtatttttctgtccatggtgaagaatgaggagaacaacacattggctactcct
ctcctgctgaaggccagggagaccagtgacctctccagggagaccagctctgccctacac
ttctgtctgagcctgttttccaaacaacaggaggtgtggagcctgaagttggagcaggaa
gtcgagaagaacaagctgctaacagaggctctccagaccttagctacagagcaccaggat
ctagaccagcagtccctctgtaaaggcaggaggtcctccacgctaagcacactcacagag
gatgacttctatgatgccctgtccgagtccgacgacgagcattctctctctctgagcggc
ttcctgtctgtggcaggacactcgtgtgaagaggaggaagaaggggaggtgaaggaagag
gagagagagccctctctgttcagcagcagcaccctcaggggacccgctgccgcctgcgac
atgtctggggaggttaaccatggcgacaagaaggcccaatgcaacggagtgaagaagcac
agaacatctttgcccgcgcccatgttctccaggaatgacgtcagcgtctggagcatcctg
aagaaatgcatcggcatggagctgtctaagatagccatgccagtaatcttcaacgagccc
ctgagttttcttcaacggctgacagagtacatggagcacacgtatctcatccaccaggct
aacgctgccacagactccatggagaggatgaagtgtgtggcagcatttgctgtgtctgct
gtagcatcacagtgggagaggactggaaaacccttcaatccacttctaggagaaacctat
gagctaatcagagaggacctagggttcaggtggatgtctgagcaggtgagccaccacccc
cccgtcagcgccttccacgccgagggtctgcaggaggacttcttgttccacggctccatc
taccccaaactcaagttctggggaaagagcgtggaggcagagcctaaaggcatcatcacc
ctggagctgcccaaatgtaatgaagcatacacctggacaaaccccacctgctgtgtccac
aacatcatcgtgggccagctgtggatcgagcagtatggcaatgtggaagtgatcaaccac
aagaccggcgagagatgcagcctgacgttcaaaccatgcggtatgtttggcaaggagctg
cacaaagtggagggctatattctggataaaagcaagaagaagctctgcgccatatatggt
aaatggaccgagtgcttatacactgtggacgccgccacctttgatgctcacaagaagaac
tcagaggagaagaaaagcaacacgcagaccagtgtagacgaagagccagaggagatgccc
ctgcctgatggagacacggtccaggtcatcccaggaagtgagctcatctggaggatagtc
ccccgaccagacaactctgcacagttctacgccttctccacatttgccatgcagctgaat
gagctggaggggggcatgaagggggtcctgccccccacagactgtcggctcagacctgac
atcagagccatggagaaaggagacatagatttggcaagtgcagagaagaagagggtagag
gagaaacaaagactggcccggaaaaatcgctccaaatcaacagaggaatggaaaacaagg
tggttccaccaaggctccaacccccacatcaaagctcaggactggctctactccaatggc
tactgggaacggaactactccctgctgcctgatatttactga
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