Oncorhynchus tshawytscha (Chinook salmon): 112226862
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Entry
112226862 CDS
T05605
Name
(RefSeq) rho GTPase-activating protein 21 isoform X1
KO
K20315
Rho GTPase-activating protein 21/23
Organism
otw
Oncorhynchus tshawytscha (Chinook salmon)
Brite
KEGG Orthology (KO) [BR:
otw00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
otw04131
]
112226862
Membrane trafficking [BR:
otw04131
]
Endosome - Golgi transport
Others
Others
112226862
Others
Rho GTPase associated proteins
Rho GTPase-activating proteins
112226862
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RhoGAP
PH
PH_9
PDZ_6
PDZ
PH_11
PDZ_2
Motif
Other DBs
NCBI-GeneID:
112226862
NCBI-ProteinID:
XP_024247260
UniProt:
A0A8C8F8T9
LinkDB
All DBs
Position
LG28:complement(19551089..19639903)
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AA seq
1858 aa
AA seq
DB search
MMASRWKGPFDEEERLTRPSLCKNDVPEWGDSPAGLFNLQGEEEPFSWPGPKTIHLRRTS
QGFGFTLRHFIVYPPESAVHPYPFPEEEHGRRGRQRNRLEPMDTIFVKQVKVGGPADGAG
LCTGDRIVKVNEESIIGKTYSQVIALIQNSDAFLKLCVMPRDEDILQLAYSQDAYLRGRS
AYSGIARHIPEPPPICYPRVDCKPPGMAQATETPSPVGVQGACRGHVGAPPPDLGYRIEI
PMPPSPPPAHPYSKSQTVACMRNNSVRTVVVPPELGHMGPAHRVEYGLVGPSDPGVIRGR
PGSVSHYPVPRKTDIYPSGASRLNYGAPPPHYPPNSNSPNPGSHQNIDWRTYQTYREYID
NKGIHAYGSRTIQERLDSLRAASQNTFNSTHYIPRGGWGPDPKGLRRRSTSHDRAYHGPP
PPFHHMPPRSSSQDRMSVAERGVHPRNWPPRSVSQDEFTHKARVRSSDYVDPVDLGRPMV
DRRGYGSRADQGTCPSRQSLSKQAAHHRPPAGYGRDSLRVGPMSNPALHTKGPEQHQPHS
APNMLKDRPSHLGKNLSLEQSNTDERAGVKGVNHVSQSRGLAETMQQPGEVPGRQVAAVV
GRRSSSLSAPHQRPQKPGIFKTSYQHPRPEPQVNGGGPSASESGVVLREKPPGSGKNPSP
LRHPSYILAVNEDDSSEPAAGAVCWLPNDARREMHMRRLSEKQEKHQTCSSSNLDESLDS
IPFIDEPASPSVDHEATSIPASAVISVAPAITTAPPSPSSSPYPLMRRQLSHDQESLRNA
ILDSDAETKQERSKSCDEGLDNYREDGRGRSNSKHMPSLRGLRKALDGHKSSDDSGSRRD
SSSDVFSDSSKEGWLNFRQINTEKSKRGGSRSWKQMYAVLRGHGLTLYKDKKDGISHASS
HSQSDDDPQPISVKACLIDISYSDTKRKNVLRLTTSDCEYLFQAEGRDDMLSWIRVIQEN
SNLDDENAGITSQDLISRKIREYNTMMSAPSSKTEPSPKTSRQSLSIRHTLLGVKGEGKG
QSPHSPKTGERDESSPPRDKAAWRRGIPGIMRKPFEKKSTAGVTFGVRLDDCPPAQTNRF
VPLIVDVCCKLVEERGLEYTGIYRVPGNNAAISSMQEELDSKGLMSDIDIQEDKWRDLNV
ISSLLKSFFRKLPEPLFTNEKYADFIEANRTEDSVERLKELKRLILELPDHHYETLKFLS
GHLKLVSENCEKNKMEPRNLAIVFGPTLVRTSEDNMTNMVNHMPDQCKIVENLIQQYDWF
FTEGDDDPVTSVEQESTVQSQPVPNIDHLLSNIGRTTTTSSPGEVSDSTCSDSSKSKQGL
WGSGKDQCSREMLLSSFFVSRKRKKPKDKTQPSSSDDDLDAVFDKKEEPEPSHQALHPAW
SPESQTKEEEERDVEDVSERGVQPGDRFQTNGKESRSDSLMSQPSPKHTPSFRTSSTCSP
YASPSRSPRLGYRSQVAHQSSLSDPPSNYDEVSDLGTMDSTSSQASVTGPRVRHGRTGGL
GPETGASGLGAEVSSITSDYSTTSSMTFLTGADLSTLSPEVCSVAESRGGDDADDERSEL
ISEGRPMETDSESDLSVFVGGGKEAGPVEKICQSDVSDAPRPLPSHRLIECDTLSRKKSA
ARQKTDSESSLDGGRSDKDSTRLSCVPGAVKVCSTDSLSSSSRSELEVGAEPAWRLKITD
RLKFRLLTSVDDMFGVGTQRSRSPEGRREKKKNIRRRHTMGGQRDFAELSVMGNWQEGGG
SRAELSAVDRLKPKCSSQDFSIREWIARERHRTSNPEVSLDFTEHQGAPLLFCSPDPNQA
QEALSSSLSEPLSPRPAPAALLNGDAGPQNKSLSLSATAHPHKLSGAQVVHSRFYQYL
NT seq
5577 nt
NT seq
+upstream
nt +downstream
nt
atgatggcgtcacgttggaaaggtccattcgatgaagaggagagactgaccagaccctct
ttgtgcaagaatgacgtgccagagtggggtgattcccctgcaggcctgttcaacctgcag
ggagaggaggagcccttctcgtggccgggtcccaagactatccatctgcggcgcacttct
cagggcttcggcttcaccctgcgccacttcattgtctacccaccagagtctgcagtgcac
ccttaccccttcccagaggaagagcatggacgcagagggagacaacggaacaggctggag
ccaatggacaccatctttgtgaagcaagtgaaggtgggtggtcctgccgatggagctgga
ctctgcacaggagaccggatagtaaaggtaaatgaagaaagtatcattgggaaaacgtac
tctcaggtcatagccttgatccaaaacagtgatgcttttcttaaactctgcgtgatgcca
agagatgaagacatactgcagctggcctactcccaggatgcgtacctccgaggccgcagt
gcctacagtggaattgcccgtcacatccccgaacctcccccaatatgttaccccagagta
gactgtaagcccccggggatggcccaggctacagagaccccctccccggtgggggtacag
ggagcatgccgggggcatgtgggggcaccaccacccgacctggggtaccgcatagagatc
cccatgcccccgtcccctcctcctgcacacccgtactccaaatcccagactgtggcatgc
atgcgcaacaacagcgtgaggactgtggtagttcctccagaactgggccatatgggacca
gctcatagagtagagtacggcctggtagggccctctgaccctggcgtcatcagagggcga
cctgggtctgtgtcccactaccccgtgccacggaaaacagacatctacccctctggtgcg
agccgcctcaattatggcgccccaccaccccactacccacccaactcaaactcccccaac
cccggctctcaccaaaacatcgactggcggacgtaccagacgtacagggagtacatcgac
aacaagggtatccatgcatacggcagccggaccatccaggagagactagacagcctgcga
gccgccagtcagaacaccttcaactccacccactacatcccccgagggggctgggggccc
gaccccaagggtctccgacgcaggagcacctcccacgaccgtgcctaccacggacccccg
ccccctttccaccacatgccccctcgcagctcttcccaggaccgtatgagtgtggctgag
cggggggtccaccccaggaactggccccctcgtagcgtgtcccaggatgagtttacccac
aaggcccgggtccgctcctctgactatgtggaccctgtcgatctgggccgtcccatggtg
gacagacggggctacggtagcagggcggaccagggtacatgcccaagcaggcagagcctc
tccaaacaggctgcccatcatcgacctcctgcaggatacggtagggacagtctccgggtg
gggccaatgtctaaccctgccctccacactaaaggaccagagcagcatcagcctcacagt
gcccctaacatgctcaaagacagaccctctcatctggggaagaatctaagcttggagcaa
tccaacactgatgaaagagctggtgtcaaaggtgtgaaccatgtgagccagagtagggga
ctggcagagaccatgcagcaaccaggggaggtgccagggagacaggtggcagcggtggtt
ggccgtaggtcctcttccctctccgctccccatcagagaccgcagaagcctgggattttc
aaaacctcttaccagcaccctcgcccagagccccaagtgaacgggggtggcccctcagcc
tccgagtcaggcgtggtgctcagggagaagcctcctgggtcggggaagaatcccagtccc
ctacgccacccctcctacatcctggcggtgaacgaggacgacagctcggaaccggcagcg
ggtgcggtgtgctggctgcccaatgatgcgcggcgggagatgcacatgcggcggctgagc
gagaagcaggaaaagcaccagacctgctcctccagcaacctggacgaatccctcgactcc
atccccttcatcgatgagccggctagccctagtgttgaccatgaggccacgtccattcct
gcttccgccgtgatatctgtcgctccagccataactacagccccccctagcccaagctcc
tccccgtaccctctcatgcgccgacagctgtcacatgaccaagagtctctcagaaatgct
attctggattctgatgccgagaccaaacaagagcggtccaaatcctgcgacgagggtctg
gataactacagagaggatggcagaggccggtcaaacagtaaacacatgcccagtctgaga
ggcctgaggaaggctctggatggacacaagtcatctgatgactccggttccagaagggac
tcctcttcagatgtattcagtgactcttctaaagaaggctggctcaacttcaggcagatc
aacactgagaagagcaagcgtgggggttcgaggtcgtggaagcagatgtatgccgtgctg
cgaggccacggcctcacgctttacaaggacaagaaggacggcatctcccacgcttcctcc
cactcccagtccgacgacgacccacagccaatcagtgtcaaggcctgcctgattgacatc
tcctacagcgacacgaaacggaagaacgtgctgcgtctgaccacgtcagactgcgagtat
ctgttccaggctgagggcagggatgacatgctgtcatggatccgagtcatccaggagaat
agtaatctggatgatgagaatgctggtataaccagccaggacctgatcagcagaaagatc
agagagtacaacaccatgatgagtgcccccagcagcaagactgagccctcccccaaaacc
tcccggcagtccctcagtatcagacacaccctcctgggggtgaagggagagggcaagggc
cagagcccccactcacccaaaacaggagagagagatgaatccagtcctccacgggataag
gctgcctggaggaggggcatccccggcatcatgaggaaaccctttgagaagaagagcact
gctggggtaacctttggggtgcgcctcgatgactgcccacctgcacaaaccaacaggttt
gttcccctcatcgtggatgtgtgctgtaagctggtagaggaaagagggctagagtacact
gggatctacagagtaccaggaaacaacgctgccatctccagcatgcaggaggagctggac
agtaaaggactgatgagtgacatcgacatccaagaagacaaatggagggacctcaatgtg
atcagtagtttactgaaatccttcttccggaaacttccagagccccttttcacaaatgaa
aaatatgcagattttattgaagccaatcgaacagaagactcagtggagaggttaaaagaa
ctcaagaggctgattcttgaattgcctgatcaccactatgaaaccctcaaatttctctct
ggacacctcaagttggtctctgaaaactgtgagaaaaataagatggagcctcgtaacttg
gccatcgtgtttggtccaaccctggtcagaacctcggaggacaacatgaccaacatggtc
aaccacatgccagaccagtgcaagatagtggagaacctcattcagcagtacgactggttc
ttcactgagggggacgatgaccctgttacctcagtggaacaagagagcacagtgcagtct
cagcctgtgcccaacatcgaccacctgctgtccaacatcggccggaccacaaccacctcc
tcgcctggggaagtctcagattcaacgtgtagtgactcctccaaatcaaagcagggcttg
tgggggtctgggaaggaccagtgtagcagggagatgctgctctcttctttctttgtcagc
cgcaagcgtaaaaagcccaaggacaagactcagcccagcagctctgacgacgacctggat
gccgtgtttgataagaaggaggagccagagccgagccaccaggccctccaccccgcctgg
tccccagagagccagacaaaagaggaggaggagagggatgtcgaggacgtcagcgagaga
ggggtacagcctggggacaggttccaaaccaacgggaaagagtcccgttcagacagcctc
atgtctcagccctctcccaaacacacccccagcttccgtacatcctccacctgctccccc
tatgcctcaccgtcccggtcccccagacttggctaccgcagccaggtagcacaccagtct
tccctgtcggaccctccctccaactacgacgaggtctcagacctgggcaccatggacagc
accagctcccaggcatctgtcacaggtcccagggtgagacatggcaggacggggggcttg
gggccagagactggggccagcggcctaggggcagaggtcagctccatcacctcagactac
tccaccacctcctccatgaccttcctgacaggggccgatctgagcacactcagtccagag
gtttgctcggtggccgagagcaggggaggagacgacgctgatgatgagcgtagtgagctg
attagtgagggccggcccatggagacggatagtgagagtgacctatcagtgtttgttggg
ggcgggaaggaagcagggccggtggagaagatctgccaatcagatgtgtcggatgccccc
aggcccctcccctcccacagactcattgaatgtgacactctctccaggaaaaagtcagca
gcgcggcagaagactgacagcgagtcctcattggacggagggcggagcgacaaggactcc
actaggctgtcttgtgttccgggggcagttaaggtgtgttccactgacagccttagctcc
tcctcccgcagcgagttggaggtgggggctgagcctgcgtggcgtctcaaaattacagac
cggctgaagttccgtctgctgacgtccgtagacgacatgttcggggtgggtacccagcgg
agccgctctccagagggacgcagggaaaagaagaagaacatcagacgcagacacaccatg
ggaggccagagggactttgctgaactgtctgtgatggggaactggcaggagggcgggggc
tcgcgggcggagctgtcggccgtggaccggctgaagccaaagtgttcttcccaggacttc
tccatccgggagtggattgcccgcgagcgccaccgcacctccaaccccgaggtcagcctg
gacttcactgaacaccagggtgcgccgctcctcttctgcagccccgaccccaaccaggcc
caggaggctctgtcgtcctccctctcagaacccctctcaccacgcccggctccagctgcg
ctactgaacggagacgcaggcccccagaataaaagcctgagcctgtcggccactgcacac
ccacacaaactctctggtgcccaggtggtccactctcgcttctaccagtacctgtga
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integrated database retrieval system
