Oncorhynchus tshawytscha (Chinook salmon): 112226895
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Entry
112226895 CDS
T05605
Name
(RefSeq) catenin delta-2 isoform X1
KO
K23491
catenin delta-2
Organism
otw
Oncorhynchus tshawytscha (Chinook salmon)
Pathway
otw04310
Wnt signaling pathway
otw04519
Cadherin signaling
Brite
KEGG Orthology (KO) [BR:
otw00001
]
09130 Environmental Information Processing
09132 Signal transduction
04310 Wnt signaling pathway
112226895
09133 Signaling molecules and interaction
04519 Cadherin signaling
112226895
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GFIT
Motif
Pfam:
Arm
ARM_ARMC5
HEAT_2
HEAT
Adaptin_N
DUF6765
ARM_PUB
Atx10homo_assoc
DUF5857
Motif
Other DBs
NCBI-GeneID:
112226895
NCBI-ProteinID:
XP_024247317
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All DBs
Position
LG28:20809724..20913115
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AA seq
1188 aa
AA seq
DB search
MLSPVLNASNGDGAETETTSAILASVKEQELQFERLTRELEAERQIVATQLERCKLGSET
GSMSSISSADEKFRWNNQDGQKDIEEELTTGLELVDSCIRSLQESGILDSQEFSAGDRQG
LLSQSALQLNNPDGSLSYPAGYLSNQALEALPRSGQVGGAVHSYNQVTSSRAAQLAASVD
SSQSRESFAQGHGSAFHMPDAPPTPSMYYSCSTLPAQRVSSPHSMQAVGSPTKLQRLGSA
SDMPSYATLQRVSSPKQSPSRLAKSYSTSSPINMVVGSAGLSSTSPLHMASSGNASGSSP
LHQFSSTVGNYATLSPTKRMQHSSDQYKISHELYANATLGRPGSLAGSRGSYSSQHSHLG
SELRPLQSPEHHIDPIYEDRVYQKPSIRSLNQNQAPSSPGVDSTPLQRTGSQNASGTLPY
QRSSFATASAADYSNPYRTLQFCPSTESPYSKSGPALPPEAALARSPSVDSIQKDPRYDP
EFLVWNQNQAEQRMTKEFGWRDPELPEVIQMLQHQFPSVQSNAAAYLQHLCFGDNKIKSE
IRRQGGIQLLVDLLDHRMTDVHRSACGALRNLVYGKANDDNKIALKNCGGIPALVRLLRK
TTDVEIRELLTGVLWNLSSCDALKMPIIQDALAVLTNAVIIPHSGWDTSPHQEDRKLHLH
SSQVLRNATGCLRNVSSAGEEARRRMRECEGLTDALLYVIQTALGSSEIDSKTIENCVCI
LRNLSYRLAAETSQGQQIGTDELDGLLCGDANGKDAESSGCWGKKKKKKKAHDQWDGVGP
FPDSADPPKGIQMLWHPTIVKPYLTLLSECSNPDTLEGAAGALQNLAAGSWKVQHSTWSV
YIRAAVRKEKGLPILVELLRIDNDRVVCAVATALRNMALDVRNKELIGKYAMRDLVHRLP
GGNNNNSSGGTAASAIGKTMSDDTITAICCALHEVITKNMENTKALRDAGGIEKLIGIAR
SKGDKHTPKVVKAASQVLNSMWQYRDLRSLYKKDGYSQYHFVGSSSTIERDRQRPYSSSR
TPSISPVRTSPNNRSASAPASPREMISIKERKTDYESTGTNASYHGNKGEHTSRKDAMAV
QISSGTSTLFRGAYVSPSDDIKHNQVPSQGPNPGQEPYPPFQNPPGVQFEEAFYEDQVHQ
RPPQATDLNMHLGLKSTGNYVDFYSASRPYSELNYETSHYPASPDSWV
NT seq
3567 nt
NT seq
+upstream
nt +downstream
nt
atgctgagcccagtactaaacgcctctaatggagacggcgccgagacagagaccacgtcg
gccatactggcctctgtcaaggaacaggagctgcaatttgaacggctgactcgagagctg
gaagctgaacggcagattgtcgccacccaactggagcgatgcaagctaggatctgagacc
ggcagcatgagtagcatcagttcagcggatgagaagtttcgctggaataaccaagacgga
cagaaggacattgaggaagaactgacgaccggcttggagctggtggactcctgcattagg
tcactccaggaatctgggatacttgactcccaggaattctccgcaggcgacagacaaggc
ctgctatcccagagtgcactacagctcaacaatccggatggttcactctcttacccagcc
ggttacctcagcaaccaggcactagaggccctgccccgcagtggccaggtgggaggggca
gtccacagttacaaccaggtgacgtctagccgtgcggcccagctagctgccagtgtagac
tcctcccagtccagagagtcgtttgcccagggccatggcagcgccttccacatgcctgac
gccccgccaactccttccatgtactactcttgctccaccctgcctgcccaacgtgtgagc
tccccccactccatgcaggccgtgggctctcccaccaagcttcagcgcctgggctctgcc
tctgacatgcccagctatgccaccctgcagcgggtctcctcgcccaagcagtcccccagc
cggctggccaagtcctacagcaccagctcccccataaacatggtagttgggtctgctggg
ctgtcctccacttccccgctgcacatggcttcttcaggcaacgcctcgggctcatcccca
ctccatcaattcagctctaccgtgggtaactacgctaccctgtcccccaccaagcgcatg
cagcactcctcggaccagtacaagatctcccacgagctgtatgcaaacgccaccctcggg
aggcctggcagcctggcaggatccaggggctcttatagcagccagcacagtcacctgggc
tccgagctgcgacctctccagtctcctgagcaccacattgaccccatctatgaggacagg
gtctaccagaagccttctatcaggagtctcaatcagaaccaggccccgtcttcccctggt
gttgactccacccccttgcagcgtacaggcagccagaacgcctcaggcactttgccatac
cagagaagcagctttgccactgcctctgctgcggactactccaacccgtaccgcaccctc
cagttctgcccatctaccgagtctccctacagcaagtctggccccgcccttcccccggag
gccgcactggcccgctcaccttctgtcgacagtatccagaaggatcccaggtacgaccct
gaattccttgtctggaatcaaaatcaagccgagcaaagaatgacaaaggagtttggctgg
agagacccagagctgcctgaggtgattcagatgctgcaacaccagttcccctcggtccag
tccaacgctgcagcctacctccaacacctgtgcttcggagacaacaagatcaagtctgag
atccgaaggcagggaggaatccagctgctggtggatctgctggatcacaggatgaccgac
gtgcaccgcagtgcctgtggtgctctgagaaacctggtgtacggaaaggccaacgatgac
aacaagatcgccctgaagaactgtggcgggatcccagccctggtccgcctgctgaggaag
accaccgatgtggagatcagggagctgcttacaggtgtgctgtggaacctgtcgtcgtgt
gatgccctgaagatgcccattatccaggatgctctggccgtgctgaccaacgctgtcatc
atcccccactcgggctgggacacctcgccccatcaggaggaccgcaagctgcacttgcac
tcctcccaggtgctccgcaatgccactggctgcctcaggaatgtgagctcggcgggggag
gaggctcgtaggaggatgagggagtgcgagggcctcactgacgctctgctctacgtgatc
cagaccgccttgggcagcagcgagatcgatagcaagaccattgaaaactgtgtgtgcatt
ttgaggaacctctcgtatcgactagcggcagagacatctcagggacagcagataggcaca
gacgagcttgacggattgctttgtggcgatgccaacggcaaggatgccgagagctctggt
tgctgggggaagaagaaaaagaaaaagaaggcccatgatcagtgggatggtgttgggccc
ttcccggactcagctgaccctcctaaaggcattcagatgctgtggcaccccaccatcgtc
aagccctacctcacactcttgtctgagtgctccaacccagacaccctggagggggcagcc
ggggctctgcagaacttggctgcaggcagctggaaggtacagcacagtacatggtctgtg
tatatccgtgcggcagtgaggaaagagaagggtctgcccatcctagtggagctcctgagg
atcgacaacgacagggtggtgtgtgccgtggccacagctttaagaaacatggccttagac
gtcagaaacaaagaactcatcggcaagtacgcaatgagagacttggtccaccgattgccc
ggggggaacaacaacaacagcagtggtgggactgctgccagtgctattgggaagaccatg
tcggatgacactatcacagctatctgctgtgccctgcacgaggtcatcactaagaacatg
gagaacaccaaggctctgcgtgacgctggaggcatcgagaaactcatcggcatcgccagg
agcaaaggagacaaacacacacccaaagtggtaaaagcagcctctcaagtcctcaacagt
atgtggcagtacagagaccttcgcagcctctacaaaaaggatggatattctcagtatcat
tttgttggctcatcctctacaatagaaagagatagacaaagaccatattcttcctcccgc
accccatccatctcgcccgtacggacatctccaaataatcgatcagcaagtgcccctgcc
tctccccgagagatgatcagcattaaggagaggaagaccgactacgaatcaacgggcacc
aatgccagttaccatggcaacaagggtgagcacacttcgaggaaagatgccatggcagtt
caaatttcaagtggaacctcaacattgttccgaggtgcctatgtctctccaagtgatgac
atcaaacacaaccaggtcccttcccagggccccaacccaggccaggagccctaccctccg
ttccaaaaccctcctggagtacagtttgaggaggcattctacgaggaccaagtgcaccaa
cgccctcctcaggccacagacttgaacatgcacctgggcctcaagtccaccggcaactac
gtggacttctactcagcatcccgcccatacagtgaactcaactatgagaccagtcactac
ccggcctccccggactcctgggtctag
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integrated database retrieval system
