Oncorhynchus tshawytscha (Chinook salmon): 112226897
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Entry
112226897 CDS
T05605
Name
(RefSeq) E3 ubiquitin-protein ligase MARCHF6 isoform X1
KO
K10661
E3 ubiquitin-protein ligase MARCH6 [EC:
2.3.2.27
]
Organism
otw
Oncorhynchus tshawytscha (Chinook salmon)
Pathway
otw04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
otw00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
112226897
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
otw04121
]
112226897
Enzymes [BR:
otw01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
112226897
Ubiquitin system [BR:
otw04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
March proteins
112226897
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
MARCHF6_C
RINGv
Motif
Other DBs
NCBI-GeneID:
112226897
NCBI-ProteinID:
XP_024247322
UniProt:
A0A8C8LUC9
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All DBs
Position
LG28:complement(20938308..20950201)
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AA seq
917 aa
AA seq
DB search
MDTAEEGDICRVCRSEGTQDKPLYHPCVCTGSIKFIHQECLVQWLKHSRKEYCELCKHRF
AFTPIYSPDMPSRLPVQDIFAGLVTSVGTAIRYWFHYTLVAFAWLGVVPLTACRIYKCLF
TGSVSSLLTLPLDMLSTENLMADCLQGCFVVTCTLCAFISLVWLREQIVHGGAPQWLEQN
QQQQPQHAPAPQLNEQGPGQGAGENQPAPAAAEPLADNGPAAEVPDIQVDPAEDMELEDE
AGAEDVGDANNGAQDDMNWNALEWDRAAEELTWERMLGLDGSLVFLEHVFWVVSLNTLFI
LVFAFCPYHIGHFSVVGLGFENNVQASHFEGLITTIVGYIFLAMTLILCHGLAALVRFQR
SRHLLGVCYIVVKVSLLVVVEIGVFPVICGWWLDICSLEMFDASLKDRELSFESAPGTTM
FLHWLVGMVYVFYFASFILLLREVLRPGVLWFLRNLNDPDFNPVQEMIHLPIYRHLRRLI
LSVVVFGSIVLLMLWLPIRTIKFILPAFLPYNVMLYSDAPVSELSLELLLLQVVLPALLE
QGHTRQWLKGLVRAWTVTAGYLLDLHSYLLGDQEENDDDADQQANNNLQGRNNNAIPDGL
HAAHQAILQQGGPVGFQPYHQPIKFSFRIVLLIVFMCVTLLVASLVCLTLPVFAGRYLMS
LWTGSAKIHELYTAACGLYVCWLSIRAITVLLAWMPQGRRVILLKVQEWTLMVMLCNTIL
KTVVVAVLLVGAIPLLLGLLFELVIVAPLRVPLDQTPLFYPWQDWALGVLHAKIIAAITL
MGPQWWLKTVIEQVYANGIRNIDLHFIIRKLAAPVICVLLLSLCVPYVISAGIVPIVAQY
SPGVTMEMQNLVQRRIYPLLVMVVMLVGILSFQIRQFKRLYEHIKNDKYLVGQRLVNYER
KAAGRSTTATHSSSSQD
NT seq
2754 nt
NT seq
+upstream
nt +downstream
nt
atggacaccgccgaggaaggggatatatgccgggtctgccggtctgaaggaacccaggac
aagccactatatcacccctgtgtttgcacaggaagtataaaattcatccatcaagaatgc
ttggtacaatggctaaaacacagcagaaaagaatactgtgagttatgcaaacacagattt
gcttttacaccaatctattctccagacatgccttcccgactgcctgttcaggacatattt
gcggggctggtgacaagtgtaggcacagctattagatactggtttcactacacactagtt
gcctttgcttggctgggagtcgttcctctcacagcatgtcgcatctacaagtgtctgttt
accggctctgtgagctcactccttaccctgccattagatatgctttctacagagaacttg
atggcggactgcttgcagggttgttttgtggtgacgtgtacactctgcgccttcatcagt
ctggtgtggctgcgggagcagattgttcatggtggcgccccccagtggctggagcagaat
cagcagcagcagccacaacatgcaccagctccacaacttaatgagcagggtcctgggcag
ggggcgggtgagaaccagcctgctcctgctgctgctgagcccctggcggacaatggtcca
gcggctgaggtccctgacatccaggtggacccggcagaggacatggagctggaggacgag
gctggggctgaggatgtaggggacgccaacaatggtgcacaagatgacatgaattggaat
gccctggaatgggaccgggcagcagaggagctaacatgggagaggatgcttggtcttgat
ggctctttggttttcctggagcatgtcttctgggtggtctcactaaacacactcttcatt
ttggtgttcgctttttgtccgtatcatattggacatttctcagttgtgggtcttggcttt
gaaaataatgtgcaggcctcccacttcgaaggcctcatcaccaccatcgtaggctatatc
ttcctggccatgacattaatactgtgccatggattggcagcgttggtgagattccaaaga
tccagacaccttttaggagtgtgctacattgttgtcaaggtatccctgctggtagtcgtg
gagatcggtgtgttccctgtcatctgtggctggtggctcgacatctgctcactggagatg
tttgatgcttctctgaaagacagagagctgagttttgagtctgctcccggcacaaccatg
ttcctccactggcttgtagggatggtctacgtcttctactttgcctcgttcatcctctta
ctgcgagaggtgctgagacctggtgttttatggtttctcagaaacctgaacgatcctgat
tttaatcctgtccaagaaatgattcacctgccaatatacagacatctcagaagattaatt
ttatcagtggtggtgtttggatccatagttttactaatgttgtggcttcccataaggacg
atcaaattcatcctcccagccttcctcccctacaatgtcatgctgtacagtgatgctcca
gtcagtgagctctctctggagctgctgctacttcaggtggttctgcctgccctgctggaa
caaggtcacacacgccagtggctcaaaggcctggtcagagcctggaccgtcaccgctgga
tatctgctagacctccactcgtacctgttgggtgaccaggaggagaatgacgatgatgcg
gaccagcaggccaacaacaatctgcaggggaggaataacaacgccatccctgatgggctg
cacgctgcccaccaggctatcctacagcagggaggtcctgtcggcttccagccctaccac
caacccattaaattcagcttcaggattgtgctgctgattgtgttcatgtgtgtgacactg
ctggtggccagtctggtgtgcctcacgttgccagtattcgccggccgatacctgatgtct
ctctggacgggcagcgcaaagatccacgagctgtacacggcagcgtgcggcctatacgtg
tgctggctgtccatcagggccatcactgtactgctggcctggatgccccagggcaggagg
gtcattctgctcaaggtccaggagtggaccctcatggtaatgctctgcaacacgatcctg
aagacggtggtcgttgctgtgctgctggttggagccatccctctgctgctgggcctgcta
tttgagctggtcatagtagctcctctcagggtgccattggaccagacaccactcttctac
ccctggcaggactgggctctcggagtgctccatgccaaaattattgctgccattactctg
atgggtccccagtggtggctgaaaactgtgatcgaacaggtgtacgctaatggaattcgc
aacattgatctccatttcatcattcgtaagctggctgctccggttatctgtgtgctactg
ttgtctctctgtgtgccctatgtcatctctgctggcatcgtccccatcgtagctcaatat
tccccaggagttaccatggagatgcagaatttggtgcagaggagaatctacccgttactg
gtcatggtagtcatgctggtgggaatcctctccttccagatccgtcaatttaagcgcctt
tatgagcacattaagaatgacaagtacctggtgggacagagactggtgaactatgaacgc
aaggcggcaggcagaagcaccacagccacacacagcagctcttcccaggattag
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