Oncorhynchus tshawytscha (Chinook salmon): 112226980
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Entry
112226980 CDS
T05605
Name
(RefSeq) nuclear receptor coactivator 2 isoform X1
KO
K11255
nuclear receptor coactivator 2
Organism
otw
Oncorhynchus tshawytscha (Chinook salmon)
Brite
KEGG Orthology (KO) [BR:
otw00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
otw03036
]
112226980
Chromosome and associated proteins [BR:
otw03036
]
Eukaryotic type
Histone modification proteins
HATs (histone acetyltransferases)
112226980
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PAS_11
DUF1518
SRC-1
Nuc_rec_co-act
NCOA_u2
DUF4927
PAS
PAS_3
PAS_9
dCache_2
Motif
Other DBs
NCBI-GeneID:
112226980
NCBI-ProteinID:
XP_024247491
LinkDB
All DBs
Position
LG28:complement(25013149..25066526)
Genome browser
AA seq
1558 aa
AA seq
DB search
MSSAGDNTPDPAARGESLKRKECGPDLLGPSPKRSMEKPNREHENKYIEELAELIFANIN
DIDNFNVKPDKCAILKETVKQIRQIKEQEKTTTTNAEEVQKAHVSSTGQSVIDKDALGPM
MLEALDGFFFVVNMEGNIVFVSENVTQYLQYNQEELMNTSVYSVLHVGDHAEFIKNLLPK
SLVNCRAPRSSENPNRNSHTFNCRMLVNPHGPWEGGEQEPQDQEVQQKYETMQCFAVSEP
KSIKEEGEDFQSCLICVARRVPVKERPMLPTYESFTTRQDLQGKITSLDTSLLRASMKPG
WEDLVRRCIQMFHLQNDGEMSFAKKHQQEVLRQGHAFSPLYRFSLSDGTIVSAHTKSKLV
RSPATNEPQLYMSLHILQREQTMCGMNPDMSAKGQGMGKQPMNTVSSLTPPSVGGLSPGL
GGHDTMVGSNTNMATMGGRYRCQGAMNRSPTPRGNSNYALKMGMNSPSQGSPSVTSQGGQ
SGGGTMVSPRHRQSPSVAGCPHVLPTGPFSPTGSLHSPLGVCNSTGVGNNHSVYTGNSSL
NALQALSECHGVSQQGQSIGSPDRKPGSMLQMQSPPGSGGASSTSNPNSSQLANRSSCTS
EREIEMFGAYGEQSQPDVEDRENVEQRKSKDDTLKPFGGSGGELTEAQNKLLNSKGHTKL
LQLLTNKSEHMEPCSPHGAPGGGEPNCKDPGMGPGGQNNHSTTLKEKHKILHRLLQNSTS
PVELAKLTAEATGKELGQGQQDQGGPDSMAATMAEMATKQESISPKKKDNALLRYLLDKD
DNTMQEKGIKMEPGTEMKLANVKTEKHDPGYNMADQSSALEDILDDLQCRQQQQLFSGQH
HQQQSRPVSLPTNVDKQSIINDILQMTENNSSPTGTNTQQKAFPGIGPGHSNGPRMGQLG
QRPPVRSMSLDQSNMSAHGSPRPFPPPRNSSPYSVMQQQAMMGNHGMLQNQSNMGNPGLP
QASMQQGWGPQGPMGHALQQRMGPDGRMVPNLSAGVPMRPSNQQPGPRQMVPMQMMGNVQ
SDMEMAGPPYPGQQALPNQTAPWPDRMMSVDHRPYGNQNRQAYGNSQDEVLCSPLRPGEG
PSDGDALLSQLYSVLKDFDGLEEIDRALGIPTLISQGQPVAQEQYANQESPMRKPPMYSQ
YPHAGSMAQGNYMSQQDPGFHGMPGQMGQRMGYPMLRLPARPGGPVPAQPNNLRLQLQHR
LQGQLQNRQPMMNQMGVSNMNLPLRPSVPNQGTLNAQMLAQRQREYLSNILRQRQQHVHQ
RAMLMRAQGLIAPPNMASAAGAVEPSQSPGMPPGSMVTNPRIPQANPQQFPYPASYGTGL
TSPPPSTSPFPPLSPGLPGAQQLLSPLHSSPISHGSSQMSLANQQGMMGNVGGQFGAVVN
PQMQQHRAFQFPSSGINQQQQDAGFTGATTPQSPLMSPRMNHAQSPMMQQQAQANSSYQP
SSELNGWPQGNMSGNSMFTQQSQAQQYMPQQSNGGMYNGINANLNMNIQGVPMASNGSMN
NMNQGSAGQMTMPTGSLSSMDPEQVNHDNALRRRDSIILDQLAGIDMLTQGDATPNYC
NT seq
4677 nt
NT seq
+upstream
nt +downstream
nt
atgagtagtgcgggggacaacacccccgaccctgctgccaggggagagtctctgaagcgg
aaagaatgtggcccggatctcctggggcccagccccaagaggagcatggaaaaaccaaac
cgggagcatgaaaacaaatacattgaagaactggcggagttgatctttgcaaacatcaat
gacattgacaacttcaatgtcaagccggacaaatgtgcaatcttgaaagaaactgtgaag
cagattcgtcaaataaaagagcaggagaaaacaactactaccaatgcagaggaggtacag
aaagcacacgtctcgtcaacaggccaaagtgttattgacaaagacgctcttggaccaatg
atgctcgaggcgctggacgggttcttctttgtggtgaacatggaggggaacattgtgttt
gtgtcggagaacgtgacccagtacctgcagtataaccaggaggagctgatgaacaccagc
gtctacagcgtcctgcacgtaggagaccacgcagagttcatcaagaaccttctgcccaag
tccctcgtgaactgcagagcaccgcggtccagtgagaatcccaacaggaatagccacacg
tttaactgccgcatgctggtcaacccccacgggccctgggaaggaggtgagcaggagccc
caggaccaggaggtgcagcagaagtatgagaccatgcagtgtttcgccgtgtccgagcca
aagtccatcaaagaggagggagaagatttccagtcttgcctgatatgcgtagcacgaagg
gttcctgtcaaagagaggcccatgctcccaacatacgagagctttaccaccaggcaggat
ctccaaggtaagatcacgtcgctggacaccagtctgctgagagcctccatgaagccaggc
tgggaggacctggtcaggagatgtatccaaatgttccacctgcagaacgacggggagatg
tcatttgccaaaaagcatcagcaagaagtcctgagacagggccatgcgttcagccctctg
tatcgcttctccctgtccgacggtaccattgtgtcggctcacaccaagagcaagctggtg
cgctcccctgccaccaacgaacctcagctctacatgtccctccacatcctccagagggag
cagacgatgtgtgggatgaacccagacatgtctgccaagggacaggggatggggaagcag
ccaatgaacactgtgtcttcactgactcctcccagtgtgggtgggctgtccccagggttg
gggggacatgacacaatggttggcagcaataccaacatggccaccatgggtggacgttac
agatgccagggggctatgaaccgttctcccactcctcggggtaacagcaactatgcactc
aagatggggatgaacagcccgtcgcagggcagccccagtgtgacctctcaggggggtcaa
agtggcggtggtaccatggtgtccccacgccaccgccagagccccagtgtggcgggttgc
ccccacgttcttcccacaggacccttctccccaacgggcagcctgcactctccactaggg
gtgtgtaacagcacaggggtggggaacaaccacagtgtctacactggtaacagctccctc
aacgcccttcaggccctcagcgaatgccacggggtctcccagcaggggcagtccataggg
tcaccagacaggaagccaggcagcatgctgcagatgcagagtccccctggtagtggtgga
gctagcagcactagtaaccccaactccagccagctggccaaccgcagcagctgcacgtct
gagagagagatagagatgtttggagcgtacggggagcagtcccagccagatgtggaggat
agggagaacgtggagcagaggaagtctaaagatgacaccctcaagccttttggaggatca
ggaggagagctaaccgaggcccagaacaagctcctcaacagtaagggccacaccaagctc
ctgcagctactcaccaacaagtcagagcacatggagccctgctcgccccacggagcccct
gggggaggggagcccaactgtaaggatcccgggatgggaccaggtggccagaacaaccac
tccaccacgctgaaggagaaacacaagatcctccatagactcctccagaacagcacgtcc
ccggtggagctggccaagctgacagctgaggccacggggaaggagctgggtcagggccag
caggaccagggaggaccagacagtatggctgccaccatggctgagatggccaccaagcag
gagtccatcagccccaagaagaaggacaacgcgctgctgcgctacctgctggacaaggat
gacaacaccatgcaggagaaaggcatcaagatggagcccgggacagagatgaagctggcc
aatgtgaagactgagaagcacgacccgggatacaacatggcagaccagtctagtgcgctg
gaagacatcttggatgatctgcagtgtcgccagcagcagcagctcttctcaggccagcac
caccagcagcagtccagacccgtgtctctgcccaccaacgtagacaagcagtccatcatc
aacgacatcctgcagatgacagagaacaacagcagtcccacgggcaccaacacacagcag
aaggccttcccaggcataggcccaggacactccaatggtcccaggatgggtcagctaggc
caacggccccctgtccgcagtatgtccctggatcagtccaacatgtctgcccatggttct
ccccgacccttccctcctcccaggaacagcagcccctactctgtcatgcagcagcaagcc
atgatgggaaaccacggaatgttgcagaaccagtctaacatgggcaacccaggcttgccc
caggctagcatgcagcagggttggggtcctcaggggccaatgggccatgctctgcagcag
agaatggggcctgatggtcgcatggtgcccaacttatcagctggagtccccatgaggccc
agcaaccagcagcctggacccagacagatggtcccaatgcagatgatgggaaacgtgcaa
tccgatatggagatggctggtcctccctacccaggacagcaagcactgcccaatcagaca
gccccgtggcctgaccgcatgatgtcagtggatcacaggccttatgggaaccagaaccga
caggcttacggtaactcccaggatgaggtgctgtgttctcccttgcggcctggggagggg
ccttcggacggggatgccctgctcagccagctctattcagtgctgaaagactttgacggc
ctggaggagattgaccgcgccctgggaatccccactttgattagtcagggccagccagtg
gcgcaggagcagtatgccaatcaggagtcacccatgaggaagccacccatgtatagccag
tacccccatgctggtagcatggcacagggtaactacatgagtcagcaggaccctggcttc
catggtatgcccggtcagatgggccagcggatggggtaccccatgctccgactccctgcc
cgaccaggaggcccggtgcctgcccagcccaacaacctgaggctgcagctgcagcatcga
ctacagggacagctgcagaatcgtcagccaatgatgaatcagatgggtgtgtccaacatg
aacctacctctcagacccagtgtacccaaccagggaaccctgaatgctcagatgttggcc
cagagacagagggagtacctgagtaacatcctgcgccagcgccagcagcacgtccaccag
agagccatgctgatgcgggcccagggcctcatcgccccccccaacatggcttcagcggct
ggggcagtggagccctcacagtcccctggcatgccccccggttccatggtcaccaaccct
cggatcccccaggcaaacccccagcagttcccctacccggccagctacggtactggtctt
acgtctccgccaccctccaccagccccttccccccgctgtcccctggtctccctggggct
cagcagctcctctcccctctccactcctccccaatctcgcatggctcctcccagatgagt
ctagctaaccagcaagggatgatgggaaacgtaggtggccagtttggagccgtagtgaat
ccacaaatgcagcaacaccgtgccttccagtttcccagctcaggtataaaccagcagcag
caggacgcaggcttcacaggagccaccaccccccagagccccctcatgtccccccgcatg
aatcacgcccagagccccatgatgcagcagcaggcccaggccaactcctcctaccagccc
tcctctgagctgaacggctggcctcagggcaacatgtcaggaaacagcatgttcacacaa
cagtctcaagctcagcagtacatgccccaacagtctaatggtggaatgtacaacggcata
aacgcaaacctgaacatgaacatacagggtgtccccatggcctccaacggcagcatgaac
aacatgaaccaaggctcagcaggccagatgaccatgcctacaggaagcctgtcttccatg
gaccctgagcaggtgaatcatgataatgccttgagacgaagggatagcatcattctagac
cagttggctggaattgacatgttaacacaaggtgacgcaactccaaactattgctga
DBGET
integrated database retrieval system
