Oncorhynchus tshawytscha (Chinook salmon): 112227002
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Entry
112227002 CDS
T05605
Name
(RefSeq) long-chain-fatty-acid--CoA ligase 3
KO
K01897
long-chain-fatty-acid---CoA ligase [EC:
6.2.1.3
]
Organism
otw
Oncorhynchus tshawytscha (Chinook salmon)
Pathway
otw00061
Fatty acid biosynthesis
otw00071
Fatty acid degradation
otw01100
Metabolic pathways
otw01212
Fatty acid metabolism
otw03320
PPAR signaling pathway
otw04146
Peroxisome
otw04216
Ferroptosis
otw04920
Adipocytokine signaling pathway
Module
otw_M00086
beta-Oxidation, acyl-CoA synthesis
Brite
KEGG Orthology (KO) [BR:
otw00001
]
09100 Metabolism
09103 Lipid metabolism
00061 Fatty acid biosynthesis
112227002
00071 Fatty acid degradation
112227002
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
112227002
09143 Cell growth and death
04216 Ferroptosis
112227002
09150 Organismal Systems
09152 Endocrine system
04920 Adipocytokine signaling pathway
112227002
03320 PPAR signaling pathway
112227002
09180 Brite Hierarchies
09181 Protein families: metabolism
01004 Lipid biosynthesis proteins [BR:
otw01004
]
112227002
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
otw04147
]
112227002
Enzymes [BR:
otw01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.3 long-chain-fatty-acid---CoA ligase
112227002
Lipid biosynthesis proteins [BR:
otw01004
]
Acyl-CoA ligase
Long/very long chain acyl-CoA ligase
112227002
Exosome [BR:
otw04147
]
Exosomal proteins
Exosomal proteins of breast milk
112227002
Exosomal proteins of breast cancer cells
112227002
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AMP-binding
AMP-binding_C
Motif
Other DBs
NCBI-GeneID:
112227002
NCBI-ProteinID:
XP_024247539
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All DBs
Position
LG28:complement(26835882..26856812)
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AA seq
715 aa
AA seq
DB search
MKLKEDMNPLLLQVFRSVVWVCSFITFLPWYFLSGAGTNLDRARRVKARSVSGRPAGPYR
ATNRAGGIHQKLVWSLHLGVDTLDKVMVHGATRFPERDCLGTREVLNEEDELQPNGKVFK
KVILGEYQWMSYEETYQAAVCFGSGLAALGQRPQCNIAIFCETRAEWMIAAQACFIYNFP
LVTLYSTLGGAAIAHGLNETEITHIITSKDLLHSRLKAILLEVPRLQHIIVVDSKPTSWP
GFPRGIMVHNLVAVQELGSRPDNMAVARRQPLPSDIAVIMYTSGSTGIPKGVMISHSNII
AGITGMAERIPDLDETDTYIGYLPLAHVLELSAEMVCISHGCRIGYSSPQTLADQSTKIK
KGSKGDTSVLKPTLMAAVPEIMDRIYKNVMTKVEEMSSVQRTLFVLAYNYKMEQMTKGYR
TPLCDSLVFRKVRSLLGGHMRVLLSGGAPLSAATQRFMNICLCCPVGQGYGLTETCGAGT
ISEMWDYSTGRVGAPLVCSEITLKDWEEGGYYSTDKPNPRGEIVIGGPNVTMGYYKNEVK
NREDFFVDSNGQRWFCTGDIGELHPDGCLKIIDRKKDLVKLQAGEYVSLGKVEAMLKNCP
FVDNICAYANSDQSYVIGFVVPNQKQLTVLAEQRGLRGSWEEICNNPDMERDVLRIITEA
ALSAKLERFEIPKKIRLSAEPWTPETGLVTDAFKLKRKELKSHYQDDIERMYGGK
NT seq
2148 nt
NT seq
+upstream
nt +downstream
nt
atgaaactgaaagaggacatgaacccgctgctgctgcaagtcttccgctcagtggtctgg
gtctgctctttcattaccttcctgccatggtacttcctctcgggtgccggcaccaaccta
gaccgggcacggcgggtcaaggcgcggtcggtgagtgggcgtccagcgggcccttaccgg
gcgaccaaccgggcaggcggtatccatcagaagctggtgtggtccttgcacctgggggtg
gacaccctggacaaggtgatggtgcacggggcgaccaggttcccagagagggactgcctg
ggcaccagagaggtgttgaacgaggaggacgagctccaacccaatgggaaggtcttcaag
aaggttatcctaggggagtatcagtggatgtcgtacgaggagacctaccaggcagcagtg
tgttttggcagtggtctggctgcgctgggccagaggcctcagtgtaacatcgccattttc
tgtgagaccagggctgagtggatgatagcagcacaggcctgcttcatatacaactttcca
ttggtgacgttgtactctactctgggcggagcggccatcgcccacggtctcaatgaaaca
gagatcacccacatcatcaccagcaaagacctgctacacagccgtctcaaggcgatcctg
ttagaggtgcctcggctgcagcacattatcgtggtggacagtaagccaacgagctggcct
ggcttcccccgcggcatcatggtccacaacttggtcgccgtgcaggagctgggctctcga
cccgacaacatggcggtggcacgccggcagcccctgccctctgacatcgctgtcatcatg
tacaccagcggctccaccggcatccccaagggtgtgatgatctcccatagcaacatcatc
gcgggcatcaccggcatggcagagcgcatcccagacctggatgagacagacacctacatt
gggtacctaccgctggctcatgttctggagctcagtgcagagatggtgtgtatctctcac
ggctgccgcatcggatactcctccccacagacgctagcagatcagtcgacaaagattaag
aagggcagtaaaggagacaccagtgttctgaagcctacactcatggctgctgtacctgaa
atcatggatcgcatctataagaatgtgatgaccaaggtggaggagatgagcagtgtgcag
agaaccctgtttgtgttggcctacaactataagatggaacagatgaccaagggctacagg
accccgctctgtgacagtctggtgtttaggaaggtgcgctcattgttaggaggtcacatg
cgggtgctgttgtcgggcggcgcgcccctttctgccgccacacagcgcttcatgaacatc
tgcctctgctgtcccgtgggccagggctacggcctcactgagacctgcggagctggcacc
atcagtgagatgtgggactacagcacaggccgggtcggagctcctctggtctgctctgag
atcaccctcaaggactgggaagagggcggttactacagcacagacaagcccaacccaaga
ggtgagattgtgatcggcgggcccaatgtgaccatgggttactacaagaacgaggtgaag
aaccgcgaggacttcttcgtggacagcaacggccagcgctggttctgtacgggagacatc
ggggagctccaccctgacggctgcctcaagatcatcgaccgtaagaaggacctggtgaag
ctccaagctggggagtatgtgtctctggggaaggtggaggccatgctgaagaactgccct
ttcgtagacaacatctgtgcttacgcaaacagtgaccagtcatatgtgattggctttgtg
gtgcccaatcaaaagcagctgacagtgctggcggagcagagagggttacggggcagctgg
gaggagatctgtaacaaccctgacatggaaagagacgtcctccgcattatcaccgaggcc
gccctgtcagccaaacttgagcgctttgagatccctaagaagatccgtcttagtgcagag
ccctggaccccagagactggcctggttacggacgcattcaaactcaaacgtaaggagctc
aaatcacattaccaggatgatatcgaaaggatgtacggtggcaagtaa
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