Oncorhynchus tshawytscha (Chinook salmon): 112227075
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Entry
112227075 CDS
T05605
Symbol
kcnn1a
Name
(RefSeq) small conductance calcium-activated potassium channel protein 2 isoform X1
KO
K04942
potassium intermediate/small conductance calcium-activated channel subfamily N member 1
Organism
otw
Oncorhynchus tshawytscha (Chinook salmon)
Brite
KEGG Orthology (KO) [BR:
otw00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
otw04040
]
112227075 (kcnn1a)
Ion channels [BR:
otw04040
]
Voltage-gated cation channels
Potassium channel, calcium- and sodium-activated (KCa/KNa)
112227075 (kcnn1a)
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Gene cluster
GFIT
Motif
Pfam:
SK_channel
CaMBD
Ion_trans_2
Ion_trans
DUF7310
DALR_1
Med4
Motif
Other DBs
NCBI-GeneID:
112227075
NCBI-ProteinID:
XP_024247665
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All DBs
Position
LG28:31820944..31870348
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AA seq
1007 aa
AA seq
DB search
MQVLVKPTNETSRLYSAGTDRNERVLELYKANEQPQQDSDFKGMRHRYAGAVYQHQIPDE
EQGSAQSRDPNPVSPVFSLPPPPPSFRERSTTTSHYQNHELPCLSQPSRRGIHASQPQHG
EPPPLTNYDIAQRPSHRVCEPDGQPAHLQQNLWAAVGSQPQSEQPVSQSCHCSFSEKANL
SYQRQPLTHPPQPSLSLPPPPTSSSLLFLQESNRGEHFQSSANYQQASIVEHCRGGEGGG
GYRDQKQLLQQHCQRLRHRDPSPEAIRTNSQKGRTVNVCESIEANRREFESQAQDLQQLQ
QQPLLRAQQQLLVGSSLPINYCANGSGEVCRNNQASLLQQHQQQQDALGLCPQRPQHCDQ
DCNKPGRTNQANQSQQHCRDSRVNPPTQPYGGNSSATGSSSKSSPNYGSSYHLWPESPHK
GEERILIDHYQATTEQKKLSHAGSKPCLSESSGRLPQIAMNTCKYNGGVVRPLGSLASSR
RNLAELDSETQPLQTLHSSGLEVVVSKGNGEDPSKASNESLVRDGNGAPVKKNKDIGYRL
GHRRALFEKRKRLSDYALIFGMFGIVVMVTETELSWGVYGKESSYSFALKCLISLSTVIL
LGLIIMYHAREIQLFMVDNGADDWRIAMTYERIFFIVLELLVCAIHPIPGHYRFTWTARI
AFTYTPSTANADVDIILSIPMFLRLYLIGRVMLLHSKLFTDASSRSIGALNKINFNTRFV
MKTLMTICPGTVLLVFSISSWIIAAWTVRVCERYHDTQEVTSNFLGAMWLISITFLSIGY
GDMVPNTYCGKGVCLLTGIMGAGCTALVVAVVARKLELTKAEKHVHNFMMDTQLCKRVKN
TAANVLRETWLIYKHTKLVKKIDHAKVRKHQRKFLQAIHQAQKLRSVKMEQRKLNDQANT
LVDLAKTQNVMYDLVSELQERSEELDKRIGMLEEKLDSVTGSLQALPCLISQAINQQQQE
FLDGFLHRFRPTSLGSERSERSERSWTSTARRRRSPSTAPHTSSDSG
NT seq
3024 nt
NT seq
+upstream
nt +downstream
nt
atgcaggtcctggtcaaacctaccaatgagacgagtcggctctattctgctgggactgat
cgcaatgaacgggtgttggagctatacaaggcaaacgagcaaccacagcaagactcggat
tttaaggggatgcggcatcgatacgcgggagctgtctatcagcaccaaatccccgacgaa
gagcaaggcagcgcgcagagccgagacccaaatccagtctctccagttttcagtctgccg
ccccctcctccgtctttcagagagcgttcaactaccacctcacactaccagaaccacgaa
ctgccttgtctgagtcaaccctctcggagaggtatccatgccagtcagccgcagcacggc
gaacccccacctctgacaaactacgacatcgcccagcgaccgtcacaccgggtctgtgaa
cccgacgggcagccagcgcacctgcagcagaacctttgggccgcagtcggctcgcagccg
cagtcggaacagcctgttagtcagagctgccactgcagtttttccgagaaggcgaacctt
tcttaccagcgccagcccctcactcacccgccgcagccctccctatctttgccgccgccg
ccaacgtcgtcctctttgctgtttttgcaggaatctaatcgcggggaacatttccaaagc
agtgccaattaccaacaggcgagcatcgtggaacactgcaggggaggagaaggaggagga
gggtaccgagaccagaagcagttgttgcagcaacactgtcaaagactccgacacagggac
ccctcccctgaagcaatccgaacaaactcgcagaaagggcgcacagtaaatgtatgtgag
tcaatcgaggctaatcggcgagaattcgagtcccaggctcaggacctgcagcagctacag
caacagccactattgcgagctcaacaacagctactggtggggagcagcttgcctatcaac
tactgcgccaacggctcaggagaggtatgtaggaataaccaggcatcactgctgcaacag
catcagcagcagcaagacgcactggggctatgtccccagcgtccgcagcactgtgaccaa
gactgcaataagccggggcgaacgaaccaagccaatcagtcgcaacaacattgccgcgac
tcccgtgtaaacccaccaacgcagccgtacggggggaactcgtctgcgactggcagtagc
agcaagagcagccctaactacggctccagctatcacctgtggccggagagcccgcataag
ggagaagagcggatactaatcgatcattatcaggcaaccactgagcagaagaagctgagc
catgctggatccaagccctgcctctccgagagcagcggccgactccctcagatagccatg
aacacctgcaagtacaatggcggcgtagtgagaccactgggcagcctggcgtcgtcgcgg
cgcaacctagcagagctcgactcagagacacagcccctccagacgttgcacagctccggc
ctggaggtggtggtatcaaagggcaacggcgaggaccccagcaaggcgtccaacgagagc
ctggtcagggacggaaacggtgctcctgtgaagaagaacaaggacattggctataggctc
ggccaccggagggcgctctttgagaaacggaagagactcagtgactacgccctcatcttt
ggaatgttcgggatcgtcgtcatggtgactgagactgaactgtcctggggagtttacggc
aaggaatcttcgtactcatttgcactgaaatgccttatcagcctttccactgttatattg
cttggtcttataataatgtaccatgcccgggaaatccagctgtttatggtggacaatggg
gcagacgactggaggatagccatgacgtacgagcgcatcttcttcatcgtgctggagctg
ctggtgtgcgccatccaccccatcccgggccattaccgcttcacgtggacggcacggatc
gccttcacctacacgccgtcgacggccaacgccgacgtggacatcatcctctccatcccc
atgttcctcaggctctacctgatcggccgcgtcatgctgctgcacagcaagctcttcaca
gacgcctcgtcgcgcagcatcggcgccctcaacaagatcaacttcaacacgcgcttcgtc
atgaagacgctcatgaccatctgccccggcaccgtgctgctggtcttcagcatctcctcc
tggatcatcgccgcctggacggtgcgagtctgcgagaggtatcatgacacacaggaagtg
accagtaacttcctgggagccatgtggctcatctctattaccttcctctccattggctac
ggagacatggtacctaacacgtactgtgggaaaggcgtatgtctgcttacagggatcatg
ggagctggctgcactgcactggtggtcgccgtggtagccaggaagttggagttgaccaag
gctgagaagcatgtccacaacttcatgatggacacacaactctgcaaacgagtaaagaac
acagctgccaatgtactcagggaaacatggctcatctacaaacacactaagttggtcaag
aagatcgatcacgccaaggtgcggaaacaccagcgcaagtttctacaggccatccatcaa
gctcagaaactgcgcagtgtgaagatggagcagaggaaactcaatgatcaggccaacacg
ctagtagacctggctaagacccagaacgtgatgtatgacctggtgtcggagctgcaggag
cgtagcgaggaactggacaagcggatcggcatgctagaggaaaagctggactcggtgacg
ggcagcctacaggctctgccctgtctcatctcccaagccataaaccagcagcagcaggaa
ttcctggacggcttcctgcaccgcttccggcccacctcactgggctcagagcgctccgaa
cgttccgagcgttcctggacctccaccgcccgccggcgtcgctcgccctcaacggcgccg
cacacctcctctgacagtggctag
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