Oncorhynchus tshawytscha (Chinook salmon): 112227109
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Entry
112227109 CDS
T05605
Symbol
cldn18
Name
(RefSeq) claudin-18
KO
K06087
claudin
Organism
otw
Oncorhynchus tshawytscha (Chinook salmon)
Pathway
otw04514
Cell adhesion molecules
otw04530
Tight junction
Brite
KEGG Orthology (KO) [BR:
otw00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecules
112227109 (cldn18)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04530 Tight junction
112227109 (cldn18)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
otw03037
]
112227109 (cldn18)
04147 Exosome [BR:
otw04147
]
112227109 (cldn18)
Cilium and associated proteins [BR:
otw03037
]
Other cilia and associated proteins
Stereociliary proteins
112227109 (cldn18)
Exosome [BR:
otw04147
]
Exosomal proteins
Exosomal proteins of ovarian cancer cells
112227109 (cldn18)
Exosomal proteins of colorectal cancer cells
112227109 (cldn18)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PMP22_Claudin
Claudin_2
Trp_oprn_chp
Amastin
CyanoTRADDas_TM
Phage_holin_5_2
Motif
Other DBs
NCBI-GeneID:
112227109
NCBI-ProteinID:
XP_024247719
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All DBs
Position
LG28:complement(32879302..32881813)
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AA seq
242 aa
AA seq
DB search
MATALQTGGFVLGLLGGAAIIAATGMNNWSVKDRQGDVVTSVYTYKGLWQNCEVGTSGFT
ECRPLYGLLGFSGTFQAVRALMIVGIVLGVIGAMIALFSLKCLKMGSMEDSSKAKMTLTA
GVMFIIAGICAIAGASIYANQIVASFMMTTYNPNYGGGMGQGIENGGNMMPRYTFGPALF
VAWIGAALLLLGGILKCVAFRGLQPDKSTYTGVAYKASQAQNRPVYDDHHAEDGKRDNQK
YV
NT seq
729 nt
NT seq
+upstream
nt +downstream
nt
atggccactgcactccagacgggtggattcgtcctgggcttgctcggcggggctgccatc
atcgccgccacggggatgaacaactggagtgtcaaggatcgtcagggggacgtggtgacc
tcggtgtacacctataagggcctgtggcagaactgtgaggtgggcacctcaggcttcact
gagtgccggcccctctacggcctcctgggcttctcaggtacctttcaggcagtgagagca
ctgatgattgtgggcattgttctgggtgtaataggggccatgatagccctgttctccctc
aagtgccttaaaatgggcagcatggaagattcctccaaagccaagatgacccttacagcg
ggggtcatgttcatcattgcaggcatttgtgctattgctggagcttcaatctatgctaac
caaattgtggctagtttcatgatgaccacctacaaccccaattatggaggagggatggga
cagggcatagagaatggaggaaatatgatgccgaggtacacgtttggccccgccctcttt
gttgcctggataggtgcagctttgctcttattgggcgggattctgaagtgtgttgccttc
aggggactacagccagacaagtcaacctacacaggagttgcttacaaagcctcccaagcc
cagaacaggcccgtctatgatgaccaccatgcagaggatgggaagagagacaaccaaaaa
tatgtataa
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integrated database retrieval system
