Oncorhynchus tshawytscha (Chinook salmon): 112227119
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Entry
112227119 CDS
T05605
Symbol
abcd1
Name
(RefSeq) ATP-binding cassette sub-family D member 1
KO
K05675
ATP-binding cassette, subfamily D (ALD), member 1 [EC:
7.6.2.4
]
Organism
otw
Oncorhynchus tshawytscha (Chinook salmon)
Pathway
otw02010
ABC transporters
otw04146
Peroxisome
Brite
KEGG Orthology (KO) [BR:
otw00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
112227119 (abcd1)
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
112227119 (abcd1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
otw02000
]
112227119 (abcd1)
Enzymes [BR:
otw01000
]
7. Translocases
7.6 Catalysing the translocation of other compounds
7.6.2 Linked to the hydrolysis of a nucleoside triphosphate
7.6.2.4 ABC-type fatty-acyl-CoA transporter
112227119 (abcd1)
Transporters [BR:
otw02000
]
ABC transporters, eukaryotic type
ABCD (ALD) subfamily
ABCD1 subgroup
112227119 (abcd1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_membrane_2
ABC_tran
AAA_21
Rad17
AAA_29
AAA_23
Dynamin-like_hel_bact
SMC_N
Adeno_IVa2
ORC-CDC6-like
AAA_5
DUF4611
Motif
Other DBs
NCBI-GeneID:
112227119
NCBI-ProteinID:
XP_042155894
LinkDB
All DBs
Position
LG16:86638721..86667187
Genome browser
AA seq
724 aa
AA seq
DB search
MLEECRGYTAPSPSINSNGVLLEGSEKQVKKKSSNSPAVNQEFLKRLSHLLRILFPQLFC
KELGLLGFHSLALISRTFLSIYVANLDGMIVKTIVKKDPQAFVWELTKWLLIAVPATFVN
SAIRYLEGQLALAFRTRLVTHAYELYFSNQTYYRVSNMDGRLANPDQSLTEDMVMFAGSV
AHLYSNLTKPCLDVVVTCYTLLRTAESKGANTTWPSVIAGVVVAITAKVLRMFSPRFGKL
VVEEARRKGELRYMHSRIIANSEEIAFYGGHKVEMSQLQRSYHSLSSQINLILFKRLWYV
MLEQFLMKYLWSASGLVMVAVPIITATGYSRYDSEDVKQLAMNLKEEDLVSERAQAFSTA
RNLLNSAADAVERIMSSYKEVTELAGYTARVHEMFTVFEDVRAGVFRRSAEGGDEQTGGG
TQLVQHGMRVEGPIMIRGQVIDVEKGISCENLPIITPTGDVVVSSLNIKVEEGMHLLITG
PNGCGKSSLFRILSGLWPVYGGVLYKPPPHNMFYIPQRPYMSVGTLRDQLIYPDTETEME
ERGFTDQQLEGILGTVNLVYILEREGGWSAESDWKDVLSGGEKQRIGMARMFYHRPKYAL
LDECTSAVSIDVEGKIFQAAKDAGIALLSITHRPSLWKYHTHLLQFDGEGGWRFERLDAS
TRVSLQDEKQKLESQLSGIPKMQQRLSDLCRMLGEDATLSGTRGEEAGEEKEAGEEEKLE
EKEE
NT seq
2175 nt
NT seq
+upstream
nt +downstream
nt
atgttggaagaatgtcgggggtacaccgctcccagtccctccataaactctaatggggtg
ctactggaggggtcagagaaacaagttaagaagaaaagtagtaactctccggctgtgaac
caggagtttctgaagaggctaagtcacctgcttcgtatcctgtttccccagctgttctgt
aaggagttgggtctgctagggttccactccctggctctcatctcaagaaccttcctctct
atctacgtggccaacctggacggcatgatagtgaagactattgtgaagaaggacccccag
gcgtttgtgtgggagttgacaaaatggctgctcattgctgtcccggccacctttgtgaac
agcgccatccgttacctagagggacagctggccctggccttccgcacgcgcttggtaacc
cacgcctatgagctctacttcagcaaccaaacatactaccgcgtcagcaacatggacgga
cgcctcgccaacccagaccagtctctgacagaagacatggtgatgtttgctggatctgtg
gcccacctgtactccaacctgaccaagccatgtctggacgtggtggtgacctgttatacc
ctcctcaggacagcggagtctaaaggagccaacaccacctggccctccgtcatcgccggc
gtggtcgtggcaatcaccgccaaggttctgaggatgttctcgccgcggtttggtaagcta
gtggtggaagaagcccggaggaaaggagagttgaggtacatgcactcgcgcatcatcgcc
aactcggaggagatcgccttctacggaggacacaaggtggagatgtcccagctgcagcgg
tcctaccactccttgtcgtcccagatcaacctgatcctgtttaagcgtctgtggtacgtg
atgctagagcagttcctgatgaaatacctgtggagtgcctcgggactcgtcatggtggct
gtaccaatcatcaccgccacagggtactcccgatatgactctgaggatgtgaagcagttg
gccatgaatttgaaagaggaggacctagtgagtgagagggctcaggccttctccaccgct
cggaacctcctcaactccgccgcagacgccgtcgagaggatcatgagctcttataaggag
gtgactgagctggctggctacacagcccgcgtgcacgagatgttcactgtgttcgaggac
gtgcgtgcgggtgtgttccgtcgctctgcggagggaggagatgagcagacggggggagga
acacagctggtgcagcacggcatgagggtggagggaccaatcatgatacgaggtcaggtg
atagacgtggagaagggcatcagctgtgagaatcttcccatcatcacaccgacaggagac
gttgtagtatccagcctcaacatcaaggtggaggaaggtatgcatctgttgataacagga
cctaatggctgtgggaagagttctctgttcaggatcctcagtggtctgtggccagtctat
ggaggggtgctttacaaaccacccccccataacatgttctacatacctcagaggccgtac
atgtcagtgggaaccctgcgagaccagttgatctacccagacaccgagaccgagatggag
gagagaggattcacggaccagcagctagaggggatcctcggaaccgtcaacctggtctac
atactggagagggaaggagggtggagtgcagaaagcgactggaaggatgtgttgtcagga
ggagagaaacagaggattgggatggcacggatgttctaccacaggcctaagtatgcccta
ctagacgagtgtaccagcgctgtcagcatcgacgtggaggggaagatcttccaggcagca
aaggatgctgggatagcactgctgtcgataacccatcgaccctccctctggaagtaccac
acccacctgcttcagttcgacggagagggtggctggcgctttgagaggctggacgcctcc
acacgtgtctctctccaggatgagaaacagaagctggagtcccagctctctgggataccc
aagatgcaacagcgcctgtcggatctctgccgcatgctgggggaggacgccaccctgtca
ggaaccagaggagaggaagcaggggaggagaaggaagcaggggaggaggagaaactggag
gagaaggaagagtga
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integrated database retrieval system
