Oncorhynchus tshawytscha (Chinook salmon): 112227126
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Entry
112227126 CDS
T05605
Symbol
cldn1
Name
(RefSeq) claudin-1
KO
K06087
claudin
Organism
otw
Oncorhynchus tshawytscha (Chinook salmon)
Pathway
otw04514
Cell adhesion molecules
otw04530
Tight junction
Brite
KEGG Orthology (KO) [BR:
otw00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecules
112227126 (cldn1)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04530 Tight junction
112227126 (cldn1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
otw03037
]
112227126 (cldn1)
04147 Exosome [BR:
otw04147
]
112227126 (cldn1)
Cilium and associated proteins [BR:
otw03037
]
Other cilia and associated proteins
Stereociliary proteins
112227126 (cldn1)
Exosome [BR:
otw04147
]
Exosomal proteins
Exosomal proteins of ovarian cancer cells
112227126 (cldn1)
Exosomal proteins of colorectal cancer cells
112227126 (cldn1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PMP22_Claudin
Claudin_2
OppC_N
TMEM37
Tweety
DUF1218
Motif
Other DBs
NCBI-GeneID:
112227126
NCBI-ProteinID:
XP_024247741
LinkDB
All DBs
Position
LG28:33338218..33341611
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AA seq
211 aa
AA seq
DB search
MANAGIQLLGFVLSFLGFIGLIASTIMAEWKLSSYAGDNIITAQAMYEGLWKSCVSQSTG
QIQCKVYDSLLQLTGMVQGTRGLMVGAILLAGIAILVAMVGMKCTTCLAEDQEKKDKVAL
TGGIVIIIAGLCALVGTSWYGNRIAKEFYDPFTPTNSRYEFGKALFVGWGSACFTIIGGA
FLCCNCSSEGSGKSSRYPPNRSAAPPGRDYV
NT seq
636 nt
NT seq
+upstream
nt +downstream
nt
atggcaaacgcggggatacagctccttggattcgtcttgtcttttcttggcttcatcggg
ttgatagcgtccacgatcatggccgagtggaaactgtcatcctatgctggggacaacatc
ataacggcgcaagccatgtacgaggggctttggaagtcttgtgtgtcacagagcactggt
caaatccagtgtaaagtgtacgattcactgctccaattaacggggatggtgcagggcaca
cgaggtctcatggtgggtgccatcctgttggctggcattgcgattctggtggccatggtg
ggcatgaagtgtaccacctgtctggctgaggaccaggagaagaaggacaaagttgccctg
actggaggaatcgtcatcattatcgcaggtctgtgtgctctggtggggacttcctggtac
gggaacagaatagcaaaggaattctacgaccccttcactcctacaaattccaggtatgag
tttggcaaggccctgttcgtaggttggggctctgcttgcttcaccatcataggtggagcc
ttcctctgttgcaactgctccagtgaaggctcaggaaagtcctcccgctaccccccgaac
cgctccgctgccccaccaggcagagactacgtctag
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