Oncorhynchus tshawytscha (Chinook salmon): 112227132
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Entry
112227132 CDS
T05605
Name
(RefSeq) vesicle-trafficking protein SEC22b-B isoform X1
KO
K08517
vesicle transport protein SEC22
Organism
otw
Oncorhynchus tshawytscha (Chinook salmon)
Pathway
otw04130
SNARE interactions in vesicular transport
otw04145
Phagosome
Brite
KEGG Orthology (KO) [BR:
otw00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04130 SNARE interactions in vesicular transport
112227132
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
112227132
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
otw04131
]
112227132
Membrane trafficking [BR:
otw04131
]
SNARE
VAMP, Ykt6, Sec22 (R)
Sec22
112227132
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Motif
Pfam:
Longin
Synaptobrevin
IMD
Motif
Other DBs
NCBI-GeneID:
112227132
NCBI-ProteinID:
XP_024247749
UniProt:
A0AAZ3STW9
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Position
LG28:complement(33453205..33465388)
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AA seq
215 aa
AA seq
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MVLLTMIARVADGLPLAASMQEDEQSGRDLQHYQSQAKQLCRKLNAQSPNRCTLEAGVMS
FHYVLEHGVCYLALCEAVFPKRLVFGYLEDLQTEFHEQHGKKVSTVSRPYSFIEFDTYIQ
KTKKTYIDSRARRNLGSINTELQDVQRIMVANIEEVLQRGEALSALDTKASNLSSLSKKY
RSDAKYLNTRSTYAKIAAGAVFFITLIVYVRFWWI
NT seq
648 nt
NT seq
+upstream
nt +downstream
nt
atggttttgctgacaatgatcgctcgggtagcagatggactgccgcttgctgcatcgatg
caagaagacgagcagtcaggaagagacttgcaacactaccagagccaggctaagcagctc
tgccgcaaactcaatgcccagagccccaacagatgtaccctggaggctggggtcatgtct
ttccactatgtattagaacatggtgtgtgctacttggccttgtgcgaagccgtgtttccc
aagaggctggtctttgggtacctggaagacctccagacagaattccatgagcagcatgga
aagaaagtctccacagtctccaggccgtactctttcattgagtttgacacatacatccag
aaaaccaaaaaaacctacattgacagcagggcacggaggaacctgggcagcatcaacaca
gaactgcaggatgtccagcggatcatggtggcaaacattgaagaggtcctgcaacgagga
gaggccctatcagctctcgacaccaaagccagcaatctgtccagcctttcaaagaagtac
cgcagcgatgccaagtacctcaacacccgatccacctatgccaagatagcagccggggca
gtcttcttcattacactcatcgtctatgtgcgtttctggtggatctga
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