Oncorhynchus tshawytscha (Chinook salmon): 112227137
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Entry
112227137 CDS
T05605
Symbol
ccdc39
Name
(RefSeq) coiled-coil domain-containing protein 39
KO
K23729
coiled-coil domain-containing protein 39
Organism
otw
Oncorhynchus tshawytscha (Chinook salmon)
Brite
KEGG Orthology (KO) [BR:
otw00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
otw03037
]
112227137 (ccdc39)
04990 Domain-containing proteins not elsewhere classified [BR:
otw04990
]
112227137 (ccdc39)
Cilium and associated proteins [BR:
otw03037
]
Motile cilia and associated proteins
96 nano-molecular ruler
112227137 (ccdc39)
Domain-containing proteins not elsewhere classified [BR:
otw04990
]
Other domain-containing proteins
Others
112227137 (ccdc39)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SlyX
TPR_MLP1_2
Gal4_dimer
Motif
Other DBs
NCBI-GeneID:
112227137
NCBI-ProteinID:
XP_024247758
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All DBs
Position
LG28:complement(33610130..33635634)
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AA seq
951 aa
AA seq
DB search
MSNILLSEVGWDEGFAIPVANAENKGLEDELQMKQNQKLQLENKLGGYKDRIQAMAEHLT
NVRQELSQTQALCKAREKETESEMHFKALAEREVGRLRQEIAQLDNELGALREKKNAQEN
NIFKATQKLEELKSQLNWDQQTLDAWLEESAHKDEDTMAIIKYAQQDESRIRELTLLIEK
MTLEANQKHKALDNELTETISAQIGLDKTAENFRQAHLERQELIHQWENTIEQMKKRDSE
MQQCSMLLTQVNQDIRERNGVIKEKKAFLESETENNKEYEKKIAMADRQAAKLRREFQEQ
ESNRTRLQDELESLKGTVDRAATDVESMRSQLANMKKDIQDKNNKVKGAKLHNTALEEKL
KTVTETTLSVEERAAQMEQVLKEEEQTIKDMDAQLHRHREVLFRESQEVQALRLKEKDSM
AVLSGSRVALSNLDSRLSKLDQNSLKQQEIIYNQDFQIQLLERKMLRLRGEVNTEEKQVL
EKKAQKLAHRLEEKKRTATMLTTQLKKLQDDIRCVRKEAEKTGAEKSDLTTKIEELHLFN
HISDKELKKLRLKKQDTMVEDNILKLEIKRLRDLLYNKADSVLSLEKRRLQLQTAMRERE
EEIKAHREMLNKQVKITDQERQGLSAEVHERLSKVDKMRKRYEIMTVSMAAPEGEEEKSQ
AYYVIKAAQEKEELQREGDDLDGKIRKMEKEIRALENTLHVVNSRNTTYRKSFNKVTESS
EEYQEKLKLDEQKRAAEEKYKYKRRQIRELQEDIQGMNNTLDNLLQEEAIQNVRTEETQS
HIMSLNRELVSQQEKLHRVTKQCSKLTKEIRSAKKTKEETFEERDIELRELKDFNKNINK
MLLVAMEEQPDLRSALHMYFVQANLPLPSPASTPASRQSSKTNSARSSVSLRSAGSSASS
SPRAASVQSPPVKTLELGLGLSVTSPPLTSPRDSHPPSSTSSSSGSKHQSP
NT seq
2856 nt
NT seq
+upstream
nt +downstream
nt
atgtcgaacatacttttatccgaggtaggctgggacgagggctttgccatcccagttgcc
aatgcagaaaataaaggtttggaagatgagcttcaaatgaaacaaaatcagaagttacaa
ctggagaacaaacttggtggatacaaggatagaatacaagccatggctgaacacctgaca
aatgttaggcaggagttatctcaaactcaggctctgtgcaaagccagggagaaagagact
gagtcggagatgcatttcaaggccctggcagagagggaggtgggccgcctgcgtcaggag
attgcacagctggacaacgagcttggagctctgagggagaagaagaatgcacaagagaac
aacatcttcaaagccacccagaagctggaagagctaaaaagccagctgaattgggaccag
cagaccctggatgcctggcttgaggagtcggcacacaaggacgaggacaccatggccatc
atcaagtacgcccagcaggacgagagcaggatacgggagctcactttgttgatagagaag
atgacgcttgaggccaaccaaaagcacaaggcactggacaacgaactgactgagaccata
tcagcacagattggtctggataagacagcagaaaacttccgccaggctcacctagagaga
caggagctgatccaccagtgggagaacaccatcgagcagatgaagaaaagagatagcgag
atgcagcagtgttcaatgctcctcacccaagtcaaccaggacatcagagagaggaatgga
gtgatcaaggagaagaaggccttcctggagagcgagacggagaacaacaaggagtacgag
aagaagatagccatggccgaccggcaggcggccaagctgagacgggagttccaggagcag
gagagtaaccgcaccagactacaggacgagttggagagtctgaaagggacagtggacaga
gcagctactgatgtcgagtccatgaggtcccagctagccaacatgaaaaaggacatccag
gacaaaaacaacaaggtaaagggggccaagcttcataacacagccctggaggagaagctg
aagacagtgactgagacgaccctcagcgtggaggagagggccgctcagatggagcaagta
ctgaaggaagaggagcaaactatcaaagacatggacgcccagctgcaccgccaccgcgag
gtgctgttccgtgagagccaggaggtacaggccctgaggttgaaggagaaagactccatg
gccgtgctctctgggagccgggtggctctctccaacctggacagccgcctcagtaaactg
gaccagaactccctcaagcagcaggagatcatctacaaccaggacttccagatccagctg
cttgagaggaagatgttgcgtctgcgtggcgaggtgaacacggaggagaagcaggtcctg
gagaagaaggcccaaaagctggcccacaggctggaagagaagaagaggacggccaccatg
ctcaccacccaactcaagaagctccaggatgatattcgctgtgtgaggaaagaggcggag
aagacaggagctgagaagagtgacctaaccaccaagatcgaggagctgcacctgttcaac
cacatctccgacaaggaactgaagaagctccggctcaagaagcaggacaccatggtggag
gacaacatcctgaagctggagatcaagcgtctgcgtgacctgctgtacaacaaggcggac
agcgtgctctcgctggagaagcggcggctgcagctgcagacggccatgagggaacgggag
gaggagattaaagcacaccgggagatgctcaacaagcaggtcaagatcactgaccaggag
cgccaaggactcagtgctgaggtgcatgagagactgtccaaggtcgacaagatgaggaaa
cgctatgagattatgactgtctcaatggctgctcccgagggagaagaggaaaaatcacag
gcttattatgtgatcaaggctgcccaagagaaagaggagctccaacgtgagggagacgat
ttggacggcaagatccgcaagatggagaaggagatccgagcgctggagaacactctccac
gtcgtcaacagccgcaacacaacctatcgcaaatccttcaacaaagtgactgagtccagt
gaggagtatcaggagaaactgaagctggatgagcagaagagagctgctgaggagaagtac
aagtacaagaggaggcagatccgagaactgcaggaggacattcagggcatgaacaataca
ctcgacaacctgcttcaagaggaggccattcagaatgtgaggactgaagagacccagtca
catatcatgtctctgaacagagaactggtttcccagcaggagaaactccacagggtcact
aagcagtgctccaaactgaccaaagagatccggtcggccaagaagaccaaggaggagaca
tttgaggagagggacattgagctgagggagctgaaggacttcaataagaatatcaacaag
atgctgctggttgccatggaggaacaacctgacctcagatcagctctacacatgtacttt
gttcaggccaacttgcccctgccgtctcctgcctccacccctgccagccgacagagctca
aagactaactctgctcgcagctccgtctctctcaggtcagctgggtcttcagccagcagc
agcccaagggcggcgtcagtgcagtctccccctgttaagactctggagctgggcctgggg
ttgtccgttacgtcccctcctctcacctctccacgggactcccatccacccagctccacc
agcagcagcagcggtagcaagcaccagagcccatag
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