Oncorhynchus tshawytscha (Chinook salmon): 112227162
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Entry
112227162 CDS
T05605
Name
(RefSeq) plasminogen activator inhibitor 1 RNA-binding protein isoform X1
KO
K13199
plasminogen activator inhibitor 1 RNA-binding protein
Organism
otw
Oncorhynchus tshawytscha (Chinook salmon)
Brite
KEGG Orthology (KO) [BR:
otw00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
otw03041
]
112227162
Spliceosome [BR:
otw03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA binding proteins (RBPs)
112227162
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GFIT
Motif
Pfam:
IHABP4_N
HABP4_PAI-RBP1
Motif
Other DBs
NCBI-GeneID:
112227162
NCBI-ProteinID:
XP_024247800
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Position
LG28:34582016..34605435
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AA seq
411 aa
AA seq
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MPGHLQESFGCVVTNRFDQLLDDESDPFEVLKAAENKKKEAAAAGITKSAAQAAKQPKKE
SQKDRKNPLLDKKDETQAAVPLKKEGIRRVDRRPDQQGQPGSQHKAGQGEGRPAGERRPD
NRRPPRERRFDKPIEDKPDVGERGEFSADKPFVDRPLRGRGGGRGGRGGRGRGMGRGDGF
DSRGKRDFDRHSGGGDKPQKSEEKRGGSGSHNWGNPKDETRISVPSGDAEQTAAPEGTPE
GVEHPPADSENKENEVEEPKEEGPKEMTLDEWKAMQDKERAKVEFNIRKPNEGADSKWNK
GYVLHKSKSEDVSDEKLKDRPAVIDAPEIEADTTSLFKGNPDEVGPDHHFRKPANDITAQ
LEINFGDLGRRGRGGARGGRGGRGAGGGRSEKPDGVSVPNVDDPEAFPALA
NT seq
1236 nt
NT seq
+upstream
nt +downstream
nt
atgcccgggcatctacaagaaagcttcggctgcgtcgtaaccaatcggttcgaccagcta
ttggacgatgaatcggaccctttcgaggtgttaaaggcggcggagaataagaagaaagag
gcggctgcagctggtatcaccaaatctgcagcccaagccgccaagcagcccaagaaggag
tcacagaaggacaggaagaatccgctccttgacaagaaagatgaaacacaggctgcagtg
cctctgaagaaagaaggtatcaggcgggtggaccgaaggccggaccagcagggccaacct
ggctcccagcacaaggccgggcagggcgaggggcggcccgccggcgagaggaggccagac
aacaggagacccccacgtgagcgccgcttcgataaacccatcgaggacaagcccgacgtc
ggagagagaggagagttctctgcagacaaacctttcgtagaccggcccctcagagggcgt
ggtggcggccgaggtgggcgtggtggacggggccggggcatgggccggggtgacggcttc
gactcccgtggcaaacgggacttcgacagacacagtggcggcggtgacaaacctcagaaa
tccgaggagaagcgtggcgggagtggctctcacaactgggggaaccccaaggacgaaaca
agaatttctgttcccagtggtgatgctgaacagactgctgcccccgagggaacccctgag
ggagtggaacaccctcctgctgactctgagaacaaggagaacgaggtggaggaaccaaag
gaggagggccccaaggagatgaccctggacgaatggaaagccatgcaggacaaggaacgc
gccaaagtggagttcaacatccgcaagcccaacgagggtgccgacagcaagtggaacaaa
ggctacgttctgcacaagtccaagagcgaagatgtcagtgacgaaaagctgaaagacaga
ccagctgtgattgatgctccggagattgaagcagacacaacctctctgttcaagggcaat
cctgacgaagttggcccggaccaccacttccgcaagcccgccaatgacatcacagcccag
ctggagatcaactttggagacctgggccggcgcgggcgggggggagcccgtggaggaagg
ggaggccgcggtgcgggaggaggccgatctgaaaagccggatggagtgtccgttcccaac
gttgacgacccagaggccttcccagccctggcttaa
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