Oncorhynchus tshawytscha (Chinook salmon): 112227209
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Entry
112227209 CDS
T05605
Symbol
extl2
Name
(RefSeq) exostosin-like 2
KO
K02369
alpha-1,4-N-acetylglucosaminyltransferase EXTL2 [EC:
2.4.1.223
]
Organism
otw
Oncorhynchus tshawytscha (Chinook salmon)
Pathway
otw00534
Glycosaminoglycan biosynthesis - heparan sulfate / heparin
otw01100
Metabolic pathways
Module
otw_M00059
Glycosaminoglycan biosynthesis, heparan sulfate backbone
Brite
KEGG Orthology (KO) [BR:
otw00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00534 Glycosaminoglycan biosynthesis - heparan sulfate / heparin
112227209 (extl2)
09180 Brite Hierarchies
09181 Protein families: metabolism
01003 Glycosyltransferases [BR:
otw01003
]
112227209 (extl2)
Enzymes [BR:
otw01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.1 Hexosyltransferases
2.4.1.223 glucuronosyl-galactosyl-proteoglycan 4-alpha-N-acetylglucosaminyltransferase
112227209 (extl2)
Glycosyltransferases [BR:
otw01003
]
Glycan extension
O-Glycan
112227209 (extl2)
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Glyco_transf_64
Glycos_transf_2
Glyco_tranf_2_3
Motif
Other DBs
NCBI-GeneID:
112227209
NCBI-ProteinID:
XP_024247851
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Position
LG28:35715583..35721761
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AA seq
348 aa
AA seq
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MRVLLRGCKGLRRSYLVAPILLLLLVGAALTALLPSIEDWGHVGAMGALRHRATAGSNAN
AIPGRHTEEEDATAFTIVIQTYNRTDVLLKLLNHYQAVPHLRRVIIVWNNIGERTPQELW
DTLGPHPIPVVFKEQSVNRMRNRLQPFAEIDTEAVLMLDDDTLVSVPDISFAFSVWKQFP
DQIVGFVPRKHVTTVTGVYSYGSFELQDPEMGGGDRYSMVLIGAAFFHHRYLQLFQEQPP
EVHALVDDTQNCDDIAVNFVVAAELRRGSGTIKSRPSGIFVKPVDMRNLERDASSGYLGM
WHRPEHLLQRSYCLNRLAQIYGAMPLRYSNMMLCQFGFPSYANHKGRG
NT seq
1047 nt
NT seq
+upstream
nt +downstream
nt
atgagagtccttctccgtggctgcaaaggacttcggcggtcctatctcgttgctcccata
ctactccttctcttggtcggtgctgccttgactgccctcctcccttccatcgaggactgg
ggccatgtcggggccatgggagcccttcgccatagagccaccgccggcagcaatgccaac
gccattcccgggcgccacacggaagaggaggacgccaccgcatttaccatagtcatacag
acgtataaccgcaccgatgtcctgctgaaactgctcaaccattaccaggcggtgccacac
ctgcggcgggtcatcatcgtgtggaacaacattggggagcggaccccccaagagctctgg
gacaccctggggccccatcccatccccgtggtgttcaaagagcagagcgtcaaccgcatg
cgcaaccgcctgcaaccatttgctgagatcgataccgaagctgtgttgatgctggatgat
gacacgttggtcagcgttccagatatcagttttgccttctctgtgtggaagcaattccca
gatcagatagttggatttgtcccccgtaaacacgttaccacggtgacgggggtctacagc
tacggcagctttgaactccaggacccagagatgggaggaggtgacaggtactccatggtc
ctgatcggtgccgccttcttccaccaccgctacctgcagctcttccaggagcagccgccc
gaagtgcacgccctggtggatgacacgcagaactgcgacgacatcgccgtgaacttcgtc
gtggcagcggagctacggcgaggttctgggaccataaaaagtagaccctctggcatcttt
gtgaagcccgtggatatgcgcaatctggagagggacgccagcagcgggtacctaggcatg
tggcaccgtcccgaacacctgctccagcgctcctactgcctgaaccggctggcacagatc
tacggcgcaatgcccctgaggtactctaacatgatgctgtgccagtttggcttcccaagc
tatgccaaccacaagggcaggggctga
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