Oncorhynchus tshawytscha (Chinook salmon): 112227216
Help
Entry
112227216 CDS
T05605
Symbol
agfg1b
Name
(RefSeq) arf-GAP domain and FG repeat-containing protein 1b isoform X1
KO
K15044
Arf-GAP domain and FG repeats-containing protein 1
Organism
otw
Oncorhynchus tshawytscha (Chinook salmon)
Brite
KEGG Orthology (KO) [BR:
otw00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
otw03019
]
112227216 (agfg1b)
04131 Membrane trafficking [BR:
otw04131
]
112227216 (agfg1b)
Messenger RNA biogenesis [BR:
otw03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Trans-acting binding proteins
112227216 (agfg1b)
Membrane trafficking [BR:
otw04131
]
Endocytosis
Clathrin-mediated endocytosis
Others
112227216 (agfg1b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ArfGap
Motif
Other DBs
NCBI-GeneID:
112227216
NCBI-ProteinID:
XP_042163928
LinkDB
All DBs
Position
LG28:36109613..36117824
Genome browser
AA seq
475 aa
AA seq
DB search
MATSAKRKQEEAHLKMLREMTSQPPNRKCFDCDQRGPTYANMTVGSFVCTTCSGILRGLN
PPHRVKSISMTTFTLQEIEFLQKHTNEVCKYIWLGLYDDKTLVVPDFREPQKVKEFLQEK
YEKKRWYVPPDQARTVAMAQASKSGSLASSTASTPEVQPPKTLQLNKTPLTRQSPMVVRS
LAHPIVQEKKFDLLTDLGGDIFAALPSQAASNANFANFANFPSQSVTKVNSKADFANFEM
FGNSGVPPHFRTSPPSQSFASGRGVPVPSVAGAVPAQSQLGTSAEDRYAALAELDNELSS
SAPTGSSVQGESRNLFGAVLGTSPAQTQPVLPNMQQGFGAVSSNNPFVAAAAPDMATNPF
QTNGIAPAAASFGTGSMSMPAGFGNASSYCFPTSFSGTFQQPFPGQAPCPYPQSGAYQPQ
QPNGPGGYTVYGQTKPSVTPFGQLMAGPGMTNNPFMAGAPAGSYPSGSSNTNPFL
NT seq
1428 nt
NT seq
+upstream
nt +downstream
nt
atggcgacgagtgcgaagcgaaaacaagaagaggcgcatcttaagatgctccgggaaatg
actagccagcccccgaataggaagtgctttgattgcgaccagcgcggcccgacttatgcc
aacatgacagtgggttccttcgtctgtaccacctgttctggcatcctacgaggcctgaat
cccccccacagagtgaagtccatctctatgaccaccttcacactacaggaaattgaattc
ttacagaaacacaccaatgaggtttgtaaatacatctggttggggctgtacgatgacaag
acattggttgttccagacttccgtgaaccacagaaagtaaaagaattcctccaggaaaaa
tatgagaagaaaagatggtacgtccctccagaccaggcgaggacggtagccatggcccag
gcctccaagtcgggctccttagccagcagcacagccagcaccccggaggtccagcccccg
aaaaccctgcagctcaacaagacccccctaacacgtcagtccccgatggtggttcgttcc
ctggcccatcccatagttcaggagaagaagtttgacctccttacagacctgggtggagac
atctttgccgctctgccctctcaggctgccagcaacgccaattttgccaactttgcgaat
ttccccagccaatcagtgactaaggttaactcaaaagctgactttgccaactttgagatg
tttggcaactctggagtacctccgcatttcaggacctcacccccctctcagtcgtttgcg
tcagggcgaggagtcccagtgccgtcagtggctggtgctgtaccagcccagtcccagctg
ggcacctcggcagaggaccgctacgctgccctggctgagctggacaacgagctgagctcc
tctgcccccacagggagtagtgtccagggtgaatctaggaatttgtttggagctgtgttg
ggaacctcacctgcccagactcagccagtcttacccaacatgcagcaaggctttggagcc
gtctcatccaataacccatttgttgctgctgctgccccggatatggccaccaaccccttc
cagaccaatggtatagcaccggccgcagcctcgtttggcacaggctctatgagtatgcct
gctggctttgggaatgcctcctcttactgcttcccgaccagttttagtgggaccttccag
cagcccttccctggccaggccccctgcccttacccccagtcgggggcctaccaaccccaa
caacctaatggccctggtggatatacagtctatggacagaccaagccctccgtgaccccc
tttgggcagctcatggctggtcctgggatgaccaataacccattcatggcgggagccccg
gccggatcctacccctctggaagctccaacaccaaccccttcctgtag
DBGET
integrated database retrieval system
