Oncorhynchus tshawytscha (Chinook salmon): 112227223
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Entry
112227223 CDS
T05605
Name
(RefSeq) ATP-dependent zinc metalloprotease YME1L1 isoform X1
KO
K08955
ATP-dependent metalloprotease [EC:3.4.24.-]
Organism
otw
Oncorhynchus tshawytscha (Chinook salmon)
Brite
KEGG Orthology (KO) [BR:
otw00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
otw01002
]
112227223
Peptidases and inhibitors [BR:
otw01002
]
Metallo peptidases
Family M41: FtsH endopeptidase family
112227223
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Gene cluster
GFIT
Motif
Pfam:
Peptidase_M41
AAA
AAA_lid_3
AAA_16
AAA_5
AAA_22
TIP49
RuvB_N
Mg_chelatase
AAA_18
IstB_IS21
AAA_17
AAA_33
AAA_28
DUF815
nSTAND3
PhoH
AAA_14
AAA_7
Motif
Other DBs
NCBI-GeneID:
112227223
NCBI-ProteinID:
XP_024247874
UniProt:
A0A8C8J4Z2
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Position
LG28:complement(36302595..36327268)
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AA seq
719 aa
AA seq
DB search
MFSLSTSVQPQVTVPLSHLINAIQYLKTAVGSSNAAAKPQHRAHALEQDLQSTEPTWSLR
DLGLSDLGVGQLDELISTMLPRLSQQGALSSSSPSQQAWGISHLSSHSFFHNKHGFSGGK
MGTSYPVFCKQIPSPLQAVCTELRYCPVWIQNRGFKTLGKHKRLQAGFERPMESDGFTPS
FMKGLLTRDKGMEVETLDKLMKNKNVPDVQQDSFKTGFAEGFLKSQALTQRTQDSLRRTR
LVLLVLLLLGLYGLSKTPFLSVRFRTTSGLDSAVDPVHMKNVTFEHVKGVEEAKNELQEV
VEFLRSPEKFTVLGGKLPRGILLVGPPGTGKTLLARAVAGEANVPFYYASGSEFDEMFVG
VGASRIRNLFKEAKANTPCVIFIDELDSVGGKRIESPMHPYSRQTINQLLAEMDGFKPNE
GVIIIGATNFPEALDNALIRPGRFDMQVTVPKPDVKGRTEILNWYLRKIKVDPDVEAGII
ARGTVGFSGADLENLVNQAALKAAVDGKDMVTLKELEFTKDKILMGPERRSVEIDKKNKE
ITAYHESGHSIVAYYTKDAMPINKATIMPRGPTLGHVSMLPDDDRWSETRAQLLAQMDVS
MGGRVAEEIIFGNEFITTGASSDFDAATRIAKMMVTRFGMCERLGVMTYTDQTKQSPETQ
AAIEHEVRKLLKDSYERARALLKSHAKEHQNLANALLQYETLDAREIKMVLEGKGLETR
NT seq
2160 nt
NT seq
+upstream
nt +downstream
nt
atgttttcattgtcaacatccgtccaaccacaggtcactgtccccctgagtcacctgatc
aatgccatccaatacctgaagactgcagtgggcagcagcaatgccgctgctaaacctcag
catagagcgcatgccttggaacaggacttgcagagcacagagcccacgtggagcctgagg
gacctgggcctgtctgacctgggcgtggggcaactggacgagctaataagcactatgtta
ccacgtctgagtcaacagggggcgctgtcctcatccagccccagccaacaggcctggggg
atctctcacctctcctcacattccttcttccacaacaagcatgggttctctggtggtaaa
atgggcacctcctaccctgttttctgcaaacagatcccttcccctcttcaggcagtttgt
acagagctccgctattgcccagtatggatccagaacagaggctttaaaactctagggaaa
cacaagcgactgcaggcaggctttgagcgtcccatggaatcagatggctttacaccctcc
tttatgaagggcctcctgacacgtgataaggggatggaggtggaaaccttggacaagctt
atgaagaacaagaatgttcctgatgtgcagcaagattctttcaagaccgggtttgctgag
ggcttcctgaaatcccaagctctgacacagcgcacacaagactctctgaggaggacgagg
ctggtcctgctggtcctgctgctcctgggactctacggcctctccaagacgcccttccta
tcggtacgattccgaaccacatcaggcctggactcagcggtggaccctgtccacatgaag
aacgtgacgtttgagcacgtcaaaggggtggaggaggccaagaacgagctgcaggaggtg
gtggagttcctccggagcccagagaagttcaccgtcctcggagggaaactgccgagaggg
atcttgctggttggccctcctggtactgggaagactctgttggccagagctgtggctgga
gaagccaacgtaccattttattatgcctctggctctgagtttgatgagatgtttgtgggg
gttggagccagtcgcatcaggaacctcttcaaggaagccaaagcaaacactccgtgcgtg
atcttcattgacgagttggacagcgtcggagggaagaggatcgagtctcccatgcacccc
tactccagacagaccatcaaccagctactggctgagatggatgggttcaaaccaaacgaa
ggggtcattatcattggagcgacaaacttccccgaggctttggataacgctctgattcga
ccgggacgtttcgacatgcaggtcaccgttcccaagccagatgtgaaggggcgcacagag
atcctcaactggtaccttaggaagattaaagtagaccctgatgtggaggctgggatcatc
gccaggggaacagtgggcttctccggggccgacctggagaacctggtcaaccaagcggct
ctgaaggcggcggtggacggcaaagacatggtgaccctcaaagagctggagttcaccaag
gacaagatcctcatgggcccagagaggaggagtgtggagatagataaaaagaacaaggag
atcacggcgtaccacgagtctggccactctatcgtggcgtactacaccaaggatgccatg
cccatcaacaaagccaccatcatgcccagaggacctacgctgggtcatgtgtcaatgctc
ccagatgatgaccgctggagcgagacgcgtgctcagctgctggcccagatggatgtcagc
atgggaggccgcgtggcagaggagatcatatttggcaatgagttcatcactactggtgca
tcaagtgactttgatgctgccaccagaattgcaaaaatgatggtgaccagatttggtatg
tgtgagaggctgggtgtcatgacctacactgaccaaaccaagcagagcccagagacacag
gctgccatcgaacacgaagtcaggaaacttttaaaggattcgtacgagcgggccagggct
ctcctcaagtctcacgctaaagaacaccagaacctagccaacgccctgttgcaatacgag
acgctggatgccagagagatcaagatggtcctggagggcaagggcctggagacaagatga
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