KEGG   Oncorhynchus tshawytscha (Chinook salmon): 112227240
Entry
112227240         CDS       T05605                                 
Symbol
rpp40
Name
(RefSeq) ribonuclease P protein subunit p40
  KO
K14530  ribonucleases P/MRP protein subunit RPP40 [EC:3.1.26.5]
Organism
otw  Oncorhynchus tshawytscha (Chinook salmon)
Pathway
otw03008  Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:otw00001]
 09120 Genetic Information Processing
  09122 Translation
   03008 Ribosome biogenesis in eukaryotes
    112227240 (rpp40)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03009 Ribosome biogenesis [BR:otw03009]
    112227240 (rpp40)
   03016 Transfer RNA biogenesis [BR:otw03016]
    112227240 (rpp40)
   03029 Mitochondrial biogenesis [BR:otw03029]
    112227240 (rpp40)
Enzymes [BR:otw01000]
 3. Hydrolases
  3.1  Acting on ester bonds
   3.1.26  Endoribonucleases producing 5'-phosphomonoesters
    3.1.26.5  ribonuclease P
     112227240 (rpp40)
Ribosome biogenesis [BR:otw03009]
 Eukaryotic type
  Pre-60S particles
   RNases
    RNase MRP
     112227240 (rpp40)
Transfer RNA biogenesis [BR:otw03016]
 Eukaryotic type
  5'processing factors
   Ribonucrease P
    112227240 (rpp40)
Mitochondrial biogenesis [BR:otw03029]
 Mitochondrial DNA transcription, translation, and replication factors
  Mitochondrial transcription and translation factors
   RNase MRP
    112227240 (rpp40)
SSDB
Motif
Pfam: Ribonuc_P_40
Other DBs
NCBI-GeneID: 112227240
NCBI-ProteinID: XP_024247900
LinkDB
Position
LG28:complement(37363375..37370563)
AA seq 361 aa
MYPELDKCPRSLLVCEKSNFEHEKSRHDTHVSKHYFNHKVSVVIPGCGALSSRLASVINN
FSKYFLVKNLPVYEFLDKDFLKNVVWNGALYALSYKTSIDQDNTIALLPSGQLILSVDKD
TYEQLGLEGKPSQYNHRQPMRYVVTIDLMDKSMAPEGKRYQRVLSSLKERVPLKSDFLLG
RHNSGADGDRALQSLLSRYQWKEHRPVVSSHTLKDLPCPSLNALDLRGDQRSCDPHSFLE
WLGAVSAGVSCDNTAASFLSTYVCPEPQTLVSQALHCTVSGLLLPEDIYSLLQELQRYFD
EPKITSWLSLTVHGFMDSPVSWGDAEHGFHKGGENFYNLVLFKNQDYWLHMGTGSHDRCP
P
NT seq 1086 nt   +upstreamnt  +downstreamnt
atgtacccggagctagacaagtgtccaagaagtttacttgtttgcgagaaatcgaacttt
gagcatgaaaagtctagacacgacactcacgtgtcaaaacattattttaaccacaaggtg
tcggttgtaataccgggatgtggtgccctttcttcccggctagccagtgtcataaacaat
ttcagcaagtattttctggtgaaaaatttaccagtctatgagtttttggataaagacttc
ttgaaaaatgttgtgtggaatggtgctctgtatgctctttcctacaagacaagcattgac
caggataacaccattgcacttctccctagcggtcagctgatcctctctgtggataaggac
acgtatgaacagctgggtctggagggaaagccgtcacagtacaatcacagacagcccatg
agatatgtcgtgaccattgacctgatggacaaatccatggcgccggaagggaagcgctac
cagcgagttctctccagccttaaagaaagggtgcctctgaaaagcgacttcctgctagga
cggcacaattcaggggcggatggggatagagcgctgcagagtctcctgtcccgttaccag
tggaaagagcacagaccagtggtcagtagccacaccctgaaggatctgccatgtccatcc
ctgaacgctttggacctgcgcggggaccagcggtcttgtgacccccacagcttcctggag
tggcttggagcagtgagcgctggtgtcagttgtgacaatacagcagccagcttcctttca
acatacgtctgtccagagccccagacactggtgagccaagccctgcattgtacagtgtcc
ggcctgctgctgcctgaagacatctactctctgctgcaggaactgcagcggtactttgac
gaacccaaaatcacatcctggctgtcactgactgtacacggcttcatggacagtcccgtt
tcctggggagatgcagaacacgggtttcacaagggtggcgaaaacttctacaacctcgtc
ctcttcaagaaccaggactactggttgcacatgggcactggctcccatgatagatgtccc
ccatga

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