Oncorhynchus tshawytscha (Chinook salmon): 112227251
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Entry
112227251 CDS
T05605
Name
(RefSeq) E3 ubiquitin-protein ligase TRIM33 isoform X1
KO
K08881
tripartite motif-containing protein 24 [EC:
2.3.2.27
]
Organism
otw
Oncorhynchus tshawytscha (Chinook salmon)
Brite
KEGG Orthology (KO) [BR:
otw00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01001 Protein kinases [BR:
otw01001
]
112227251
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
otw04121
]
112227251
Enzymes [BR:
otw01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
112227251
Protein kinases [BR:
otw01001
]
Serine/threonine kinases: Other
TIF1 family [OT]
112227251
Ubiquitin system [BR:
otw04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRIM/RBCC proteins
112227251
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-B_box
Bromodomain
ANCHR-like_BBOX
PHD
zf-RING_UBOX
zf-RING_5
PHD-1st_NSD
zf-C3HC4
zf-RING_2
zf-C3HC4_2
Motif
Other DBs
NCBI-GeneID:
112227251
NCBI-ProteinID:
XP_042157262
LinkDB
All DBs
Position
LG01:15548674..15561703
Genome browser
AA seq
997 aa
AA seq
DB search
MDEGAESDDAVIIVENEAESMPVQENTNACNERTGTLNFLDTCPVCHLNFHSREPKLLPC
LHSFCKKCLPSASRNLAMPDTNSSTKPLNVIRCPVCRQECMEVDVMENFFVRDSVEASSS
TVERTVQLCMSCEDNTETTGFCVDCVEFMCATCVEAHQRVKFTKDHTIRQKGDVSQEYVG
VSTHRPVFCEVHKQEPLKLFCETCDLPTCRDCQLLKHKDHNYQFLEDAYKNHKHYMEDMN
RQLLEKKKIIEDVSNSINNGLLQVDENRISVHNEIKKSICSLILEINRKGKILVNQLEGL
TKDHESGLKKQKEDIGYLSRHLDHVINFTKWATARNGGTALLYCKRLILFQIGNLLRAKC
NTSFVPQSTVRFQCRSGFWSSNVDLGSLVVENVPGPQLGSFQGIPHQLPHPGHGPSGSPN
SLPPGLSQPRLAPHNHNTLAQLQMQVEKLAQQPHWQPQTPPWAWYQSMRLQRPPPGPLQG
GSPSQSLPPMPQQGRRFIAPPAIHLSPTSTLPSPGYPPQAVQSLRGLVSSPSSYALKHMD
IFNPMPHFSHNAPLSSNGSLSSPHLRQQQMESAYHNKHPGGPVQIIRPNFPQTLPASLPY
RTAQGHHHAGLTAISCEEKPGTVSWKPLETQQKAYGAGGSAAKRRRRASPGPIIIIKDEP
EDDISCVQGNLRANLPDSSTGVQAQTCRQDGGEPQVQISCQSTEEKAQAPPQPPGPSGDL
SQAPQQSHSLGAEQQLGSQGPAPEEDPNEDWCAVCQNGGELLLCCDKCPKVFHLSCHIPT
LFRLPSGEWFCSFCRDLSVPEVVYDCDISRLEPRTVKEEPDSEGGFCPVDKRKCERLLLK
MFCSELSADFQEARSPLILPENQETQKMPMVLSIVKSKLESRQSPCYQTPSEFVSDIRLI
FRNCAAFNEADTEVATAGRNLERFFEEQLKFLYPERIFTKVKSEVISSVTPPVSPPPPTT
PDEESSQHAKHQRRCSETQELCTPAQLSSPKGEEEAV
NT seq
2994 nt
NT seq
+upstream
nt +downstream
nt
atggatgaaggtgcagagtccgatgatgctgtcattattgtggagaacgaagcagagagc
atgccagttcaggagaacacgaacgcctgcaacgagcggacaggcaccttgaattttctg
gacacttgtcccgtgtgtcatttaaactttcacagtcgagaaccaaaacttctgccatgt
ctccactctttttgtaagaagtgtttgccgtcggcttccaggaatttggccatgccagac
actaacagctcgacgaaaccactgaatgtgattcgctgtccggtgtgcagacaggagtgt
atggaggtggacgtgatggagaacttctttgtgagggactcagtggaggcttccagcagc
accgtggagaggactgttcagctatgtatgagttgtgaggacaacacagagactacaggt
ttctgtgtggactgtgtggagttcatgtgtgccacctgcgtggaggcccaccagagggtc
aagttcaccaaagaccacaccatcagacagaagggggatgtatctcaagagtatgtgggt
gtttccactcataggccagtgttctgtgaagtccacaagcaggagcccctgaagctgttc
tgtgaaacctgtgatctaccaacctgtcgagactgtcagctactcaagcacaaggaccac
aattaccagtttctggaggatgcctataagaatcacaaacattacatggaggatatgaat
cgtcaactgctggaaaaaaagaagatcattgaagatgtgtcaaactccataaacaatgga
ctccttcaagttgatgagaaccgcatatcagttcacaatgaaatcaagaagtccatctgt
agtctgatactagagatcaacagaaagggaaagattcttgtcaatcagcttgagggcctg
acaaaggatcatgagagcggtctgaagaagcagaaggaggatattggctatctgtccaga
cacctggatcacgtgatcaacttcacaaaatgggcgacagctaggaacggcggcacagct
ctcctgtactgcaaacgtttgattctgtttcagatcggaaacctcctgcgggctaaatgc
aatacctcgtttgtaccgcagagcactgtgcgtttccagtgtcggtcaggcttctggtct
tcaaatgtcgatctgggctcattagtggtggagaatgtcccaggcccccagctgggcagc
ttccagggcatccctcatcaactcccccatcctgggcatggcccttcaggctcccccaac
agcctgcccccaggcctctcccagccccgcctggccccccacaaccacaacaccctggct
cagctccagatgcaggtggagaaactagcccaacagcctcactggcagccccagacccca
ccctgggcctggtaccagagcatgcggctccagagaccccctccagggcccctccagggt
ggctctccctcccagagtctcccccccatgccccagcagggccggaggttcattgccccc
cctgcaatccatctcagtcccaccagcaccctgccaagtcctggatatcctccccaggct
gtccaatcactgagaggcctggtgagcagccccagcagctatgcactcaaacacatggac
atattcaacccaatgcctcacttctcccacaatgcaccactgtctagcaacggcagcctc
agttctcctcacttgcgacagcaacagatggagtctgcatatcacaacaagcaccctgga
ggccctgtccagataataagacccaacttccctcagaccctaccagcttccctcccatac
agaactgcacaaggacaccatcatgcaggactaactgctatatcctgtgaagagaaacca
gggactgtttcctggaaacctctggagacacagcagaaggcgtatggagctgggggatca
gctgccaagaggagacgaagggcatcgcctggacccatcatcatcatcaaagacgagcca
gaggacgacatcagctgtgtacagggtaacctgagagccaacctcccagacagtagcacg
ggggtccaggcccaaacctgtcggcaagatggaggggaaccacaagtccagatttcttgt
cagagcacagaggaaaaggcccaggccccaccacagcctccagggccttcaggggacctg
agtcaagccccacagcagagccactctctgggggcagagcagcagctaggcagtcagggc
ccagctccagaagaggaccctaatgaggattggtgtgctgtgtgtcagaatggaggagag
ctgctgctgtgttgtgacaagtgtcccaaagtcttccacctctcttgccacatccccacc
ctcttcagattacccagtggggagtggttctgctcattctgccgtgacctgtcagtgcct
gaggtggtgtatgactgtgacatcagcagattagagcccagaacagtgaaggaggaacca
gactctgagggaggattctgccctgtggacaaacggaaatgtgagcgactgttgctgaag
atgttctgcagtgagctcagtgctgacttccaggaagctagatcccccttgatattgcca
gagaaccaggagacccaaaagatgccgatggttctgtccattgtgaagagcaagctggaa
tccaggcagagcccctgctaccagacaccgtctgagtttgtatcagacatccgactcatc
ttcaggaactgtgcagcattcaatgaggctgacactgaggttgccactgcagggagaaac
cttgagaggttctttgaggagcagttgaagttcctctaccctgaacggatttttacaaag
gtcaagtccgaggtcatcagttctgtgacccctcccgtctctcctccccctcccacaacc
cctgatgaggagagctcccagcatgcaaagcatcagcgcaggtgctctgagacccaggag
ttgtgtactcctgctcagctaagctcaccaaagggagaggaagaggccgtataa
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