Oncorhynchus tshawytscha (Chinook salmon): 112227314
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Entry
112227314 CDS
T05605
Name
(RefSeq) ski-like protein
KO
K18499
Ski-like protein
Organism
otw
Oncorhynchus tshawytscha (Chinook salmon)
Pathway
otw04350
TGF-beta signaling pathway
Brite
KEGG Orthology (KO) [BR:
otw00001
]
09130 Environmental Information Processing
09132 Signal transduction
04350 TGF-beta signaling pathway
112227314
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Gene cluster
GFIT
Motif
Pfam:
Ski_Sno_DHD
c-SKI_SMAD_bind
DUF4407
Seryl_tRNA_N
Motif
Other DBs
NCBI-GeneID:
112227314
NCBI-ProteinID:
XP_042164326
UniProt:
A0A8C8D2Y3
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Position
LG28:complement(7029629..7065944)
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AA seq
799 aa
AA seq
DB search
MRIKQTNKTHINSKGSINPSEGGIGTKRTSINADMASTQTSLKTSFKDLTSFKGNMKRLY
RERLEDAPIKKRLMAEMNLKRCSLDTLPQTPKVKRESGEEYTQHREADRGMDRSIEMDSR
GELQVCGAKALDLSPGLKHTLAAFTLSSQSSLGGPAAFSARSGHEASPEVSPDSCPSVAP
LPSPPVLGGGPLLVPSDSSTELSHSLLEGESISCFAVGGEKRLCLPQVLNSVLRDFSLQQ
INAVCDELYVYCSRCDGEQLHILKVLGILPFNAPSCGLITLTDAQRLCNSLLRPGAALSS
DPSTKRPGQGLLKETESSFQVEHQCLGKCQGLFVPQFYTQPEAPCVQCVECQLLFSPQKF
VMHSHKSPDKRTCHWGFDSAKWPCYLQLGRKYMGMPEEPQLKLLLEDMKDKFHYNRTTDK
MEDEDRDTQVKRSRPPEPLVSPNSKLADSDAATKAKAQATLVFNRLFPHIKEEPGHPAMV
HPSHFLYTYDKMVAPNVSLKGQPEVSPEVLGVLLKHHYSRRLTHGHGDTAMDLHASPVVD
ETKSQQRVVSAADRERQQPVSMETSPGNKSYSAVVGAAATAAVASSVAALGSKDVLSSGC
EDDKDRIVVEIVQMYSRQQEKLHSTLHKQLHLEMELEALRGGEAARLQQLSAEQRELQSE
LEAVHTEHTQKLGQVREEQRELEHRLEQLRQQSCVCDNSIHTHQEAHYANQLAELRGRLD
GAEADREELQEELKRERDAREKLERIISQLKHQMASSSSSSATTIATGSPSSNPAPSTQA
PHKEGHIAGLEQQNGHAQK
NT seq
2400 nt
NT seq
+upstream
nt +downstream
nt
atgagaataaaacaaactaacaaaacccacattaactcaaagggttctataaatccaagt
gaaggtggtattggaacgaaacggacctctatcaacgccgacatggccagtactcagacg
agtctgaaaacctcattcaaagatctgacctcgttcaagggcaacatgaagcggctgtac
cgagagaggctagaggacgcgcccatcaagaagaggctgatggctgagatgaacctgaag
cgatgcagcctagacaccctgccccagacccccaaggtgaagagggagtctggggaggag
tacacccagcaccgggaggcagatagaggcatggatagatccatagagatggacagtaga
ggggagctccaggtatgtggagccaaggctctggatctcagtcctgggctgaaacacaca
ctggctgccttcaccctcagcagccaaagctctctggggggcccagcagccttctcagcc
cgctccggccacgaagcctcccccgaggtcagccctgattcctgccccagcgtggcccct
ctaccctccccaccagtcctaggaggtggacccctcttggtgcccagcgacagctccaca
gagttaagccactcccttctagagggggaatccatctcctgctttgctgtcggtggggag
aaacgcctctgcctcccccaggtgctcaactcggtgctccgcgacttctccttgcagcag
atcaatgcggtgtgcgacgagctctacgtgtactgctcgcgctgcgacggtgaacagctc
cacatcctcaaggtgctgggtattttacccttcaacgccccgtcttgcggcctcatcacc
cttaccgacgcccagcgcctctgcaactccttgctccgcccgggggctgccctgtcctct
gaccccagcaccaagcggcccggccaggggctcctaaaggagacggagtctagcttccag
gtggagcaccagtgtctagggaaatgccagggtctgtttgtaccccagttctacacacag
cctgaggcgccctgtgttcagtgcgtggagtgccagctgcttttctcaccgcagaagttt
gtgatgcactcacacaagtccccggacaagaggacctgtcactggggctttgactctgcc
aagtggccgtgctacctgcagctggggaggaagtatatgggaatgcctgaggagccgcag
ctcaaactgctgctagaggacatgaaggacaagttccactacaacaggaccactgacaaa
atggaagatgaggacagggacacccaggtgaagagatcgcgtcctcccgagcctctggtt
tctcctaacagtaaactggccgacagcgatgcagcaaccaaggctaaagcccaggctact
ctggtgttcaaccgcctgttcccccacattaaggaagagcctggccaccctgccatggtc
catcccagtcacttcctgtatacatatgataagatggtggctcctaacgtgtctctgaag
ggtcagccggaggtcagccctgaggtactgggggtgctgctcaaacaccactacagcagg
agactgacccacggccacggcgacactgctatggatctccacgcctctcctgtagttgac
gagaccaagtctcagcagcgcgtcgtttccgctgccgaccgggagcgccagcagccagtt
tccatggaaaccagccccggcaacaagagttattctgctgtagtgggagccgcagcgact
gcggcggtagcgtcatcggtagcggcgctggggagtaaagatgttctgtcttcaggctgt
gaggacgacaaggacaggatcgtagtggagatcgttcagatgtacagcagacagcaggag
aaactgcactccaccctgcacaaacaactgcatctagagatggagttggaggcgctgcgt
ggaggcgaggcggccaggctgcagcagttgtctgcagagcagcgtgagctgcagagtgaa
ctggaggcagtccacactgagcacactcagaaactggggcaggtgagggaggaacagagg
gagttggagcacaggctggaacagctgcgacagcagagctgtgtgtgtgacaacagcata
cacacgcaccaggaggcacactacgccaatcagctggcagagctgcgtgggaggttggat
ggtgcggaggctgacagggaggagctccaggaggagttgaagagggagcgggatgctcgg
gagaagctggagagaatcatctctcagctcaaacaccagatggcctcttcctcgtcttcc
tcggccaccacaattgctacagggagcccctcttcaaaccccgccccctccacacaagca
ccccacaaagagggacacatcgcaggcctcgagcagcagaatggccacgctcagaagtag
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