Oncorhynchus tshawytscha (Chinook salmon): 112227350
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Entry
112227350 CDS
T05605
Name
(RefSeq) LOW QUALITY PROTEIN: nuclear factor of activated T-cells, cytoplasmic 4
KO
K17334
nuclear factor of activated T-cells, cytoplasmic 4
Organism
otw
Oncorhynchus tshawytscha (Chinook salmon)
Pathway
otw04020
Calcium signaling pathway
otw04148
Efferocytosis
otw04218
Cellular senescence
otw04310
Wnt signaling pathway
otw04625
C-type lectin receptor signaling pathway
Brite
KEGG Orthology (KO) [BR:
otw00001
]
09130 Environmental Information Processing
09132 Signal transduction
04310 Wnt signaling pathway
112227350
04020 Calcium signaling pathway
112227350
09140 Cellular Processes
09141 Transport and catabolism
04148 Efferocytosis
112227350
09143 Cell growth and death
04218 Cellular senescence
112227350
09150 Organismal Systems
09151 Immune system
04625 C-type lectin receptor signaling pathway
112227350
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
otw03000
]
112227350
Transcription factors [BR:
otw03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
RHR (Rel homology region) NF-AT
112227350
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
RHD_dimer
RHD_DNA_bind
TIG
Motif
Other DBs
NCBI-GeneID:
112227350
NCBI-ProteinID:
XP_042163878
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Position
LG28:11892832..11906024
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AA seq
886 aa
AA seq
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MGAAPGSGWEEGEFEFKLVFEEDPPRQLRGPSPLRNADQEHTVAGERTESSLSLPTSSNT
DSHLAATHVGQPIGIPTPPSSSASQRAGMHSPPPRRALVREFSGTYESLPARSVQVSESR
VLECPSIQITTISPEDDTAPAGSNYWDTGGGWERERLYLPLLDPFCYRDGGTGTGSLSPS
PASSPSSRGWLSPASSCDSLLVEEEDLNEVTSHFCLSPSSRPTSPGGKKRRNSPLASPCT
SRRSSYSEDHSCNQEEGDSTSQSHGPNSSFELSIPQKTRKTSLEQVSPREVEQVQAPAHS
THCPLPELLQQRREAPSMGMDYLSVPPALGWGRTRASAHSPLFRSNALPPLDWPLPTQFD
QYELRIEVQPRPHHRAHYETEGSRGAVKASPGGHPVVKLTGYTERQPLSLQVFVGTADDR
SIRPHPFYQIHRVTGKMVGTASQESLQAGTKILDIPLNPDTNMTALIDCAGILKLRNSDI
ELRKDQLSLSXHFLXVCILTRYHIYQYPSEICLLSLSSQSLSSAQRSAQELPVVESVSLT
SCSVEGGEELLLGGSNFLPMSRVLFMERGTDGKLQWEEEAHVDRDNSSECLLCVRVPAYS
DLSVSRPVSVCLYVSNGKRKRSSTHCFKYLPVMFKEEDPLLSHPSALPLEGVTLCSMREP
SRVDSGVHRGNDPMLEEGGLAFHLPPYPSVCSPPYPGQSYQEYCHKPETVEESRGSLSER
HPSFENLELGFTELLPPFYPRVPQPPSPSPWLDSPYLSSSPSPSHSSSLSPFPSSSPISS
SPRPPMTTSPFPHYPYPHEVCPSPPSNPSPYQDFYPPPYSHYEVWDHQGRGPGEREAQAG
PKMQESPLEFSSSSSFHHITLEEVNEFIGEDIRSFHSGSQMDSQPG
NT seq
2661 nt
NT seq
+upstream
nt +downstream
nt
atgggggccgcgccgggttcgggctgggaggagggggagttcgagttcaagttggttttt
gaggaggacccgccgcgccaactccggggcccatccccgctgcgcaacgcggaccaggag
cacaccgtcgcaggggagaggacagagagctccctgtcgctcccaacgtcgagcaatact
gacagccacctggctgccactcatgtaggccagccaatcggcatccctaccccaccgtct
tcttcagccagtcaaagggctgggatgcattccccgccccccaggcgtgccttggtgagg
gagttcagcgggacttatgagagtcttccagcgcgatctgtacaagtctcagagtcccgt
gtgttggagtgccctagcatccagatcactactatctctccagaggatgacactgcccca
gcaggaagtaactactgggacacaggaggtggctgggagagggagcgcctctacctcccc
ttactggacccattctgctaccgcgacggcggcaccggcactgggtccctgagcccaagc
cctgcctccagcccctcttctcgcggctggctcagtcctgcgtccagctgtgattcgctg
ctagtagaggaggaggatctcaatgaggtcacttcccatttctgcctgtcgccctcctcc
cggccaacctccccggggggtaagaagcgcaggaactcccccctggcctccccctgcacc
tcccgcaggagcagctactctgaggaccactcctgtaaccaggaggaaggagactccacc
tctcagtcacatggtcccaacagcagctttgagctgagcatcccacagaagaccaggaag
acgtcactggagcaggtttcccccagggaggtggagcaagtgcaggctccagcccatagc
acccactgcccactcccagagctgctgcagcagaggagagaggccccttccatgggcatg
gactacctgtctgtgccccctgctctgggctgggggaggaccagagccagcgcccacagc
cctctgttcagatccaatgctttgccaccacttgattggcctctgccaactcagtttgac
caatatgaactgcgtatcgaggtgcagccccgcccacaccaccgagcccactacgagacg
gagggaagcagaggagccgtcaaggcatcaccagggggacatccggttgttaagctgact
gggtacacagagagacagccgctctctttgcaggtgtttgtgggaacagctgatgacagg
tccatccggcctcatcctttctatcagattcacagggtgacagggaagatggtgggcact
gccagtcaggagagcctccaagctggcaccaaaatactggacatccccctcaacccagat
accaacatgactgcgctcattgactgtgctggcattctgaagctgaggaactcggacatc
gagctgaggaaagatcaactctccctgtcctgacactttctttgagtttgtattttgaca
aggtatcatatttatcaatatcctagcgaaatctgtcttctctctctctcctctcaatct
ctctcctcagcccagcgctctgctcaggagctgccagtggtggagtcggtcagtcttaca
tcctgctctgtggaaggaggggaggagctactgttgggtgggtctaacttcctgcccatg
tccagagtgctttttatggaaagagggacagatggaaagctacagtgggaagaggaggca
catgttgaccgtgacaacagtagtgagtgcttgctgtgtgtgcgagttccagcctatagc
gacctctcagtgagccgcccagtatctgtgtgcctttacgtctccaacgggaagagaaaa
aggagcagcactcactgtttcaagtacctgccggtcatgtttaaagaggaggaccctctg
ctgtcacatccctctgccttgcccctggagggggtgacactctgctccatgagggagccc
agcagggtggacagcggtgtgcaccgggggaatgatcccatgctcgaggagggaggactg
gccttccaccttcccccctacccttcagtctgctctcccccctaccccggccagagctac
caggagtactgccacaagccggaaactgtggaggagagcagaggttctctgtcggagaga
caccccagctttgagaacttggagctgggcttcactgagctactgcctcccttttacccc
agagtcccccagcctccctccccctccccttggctggactccccatacctgtcctcttcc
ccctctccctcccactcctcctctctgagtcccttcccctccagcagccccatctcctcc
tcccctcgtccccccatgactacctctcccttcccccactacccctaccctcatgaggtc
tgcccctcgcctccttccaaccctagcccgtatcaggacttctacccaccaccgtactcc
cactatgaggtatgggaccaccagggcaggggacctggggaaagggaagctcaggctgga
cctaaaatgcaggagagccccctggaattttccagctcatcatcctttcaccacattaca
ttagaggaagtgaatgagttcataggagaagacatcagatccttccattcgggctcacag
atggacagccaaccgggatga
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