Oncorhynchus tshawytscha (Chinook salmon): 112227440
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Entry
112227440 CDS
T05605
Symbol
sec22c
Name
(RefSeq) vesicle-trafficking protein SEC22c
KO
K08520
SEC22 vesicle trafficking protein A/C
Organism
otw
Oncorhynchus tshawytscha (Chinook salmon)
Brite
KEGG Orthology (KO) [BR:
otw00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
otw04131
]
112227440 (sec22c)
Membrane trafficking [BR:
otw04131
]
SNARE
VAMP, Ykt6, Sec22 (R)
Putative SNAREs
112227440 (sec22c)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Longin
DUF6234
Motif
Other DBs
NCBI-GeneID:
112227440
NCBI-ProteinID:
XP_042164662
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All DBs
Position
LG29:39453040..39470961
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AA seq
303 aa
AA seq
DB search
MSLILFALVVRVRDGLPLSASTDFQHNPELQERKQQLRTISKALSLFPDRGVVKGHDLNI
YFLSSEGVSYMSVCNARLPAAMAFCFLEDLRWEFTAHMDSAKVALAARPYPFLEFDNSIA
WLQQQYNQRGGPALEVTLTEVQEDLKNRPLQILTLEEVEFTNGSANGHAEQFSESGQNQR
LEPVTAPGILSLVLNIMCSSLNLIRGVHLIEYTFQDDYEGIWNVVAFLLAFLCCVGQCHL
YLFHSSLKRVKSLTLLSVVVVCNYFLFGLRNVWQLLFHLAVAVLVTLLTLNRKLHDRTND
CGV
NT seq
912 nt
NT seq
+upstream
nt +downstream
nt
atgtctctgatcctgtttgccctggtggtgcgggtcagggatggtctgcctctctcagcc
tccactgacttccaacacaacccagagctgcaggagaggaagcagcagctacggaccatc
tccaaggccctcagcctcttccctgacagaggggtggtcaagggccatgacctcaatata
tatttcctctccagtgagggcgtatcctacatgagcgtatgtaacgccaggctccctgca
gccatggccttctgttttctagaggacctgcgctgggagttcacagctcatatggacagc
gccaaggttgccctggcagccaggccgtacccctttctggagttcgacaacagcatagcc
tggctgcagcagcagtataaccagaggggtggtccagcgctggaggtcactctgaccgag
gtacaggaggatctgaaaaaccgccctttgcagatcctcactttggaggaggtggagttt
accaacgggtcagccaatggccacgcggaacaattttctgaatccggtcagaaccagagg
ttggagccagtgaccgccccaggaatcctctcactggtcctcaacatcatgtgttcttct
ctaaacctcatcaggggagttcatctcatagagtacaccttccaggatgattatgaagga
atctggaacgtggtggcgtttctgctggcgttcctgtgctgtgttggtcagtgtcacctg
tatctgttccactcttctctgaagagggtcaagtccctgacactgttgagtgtggttgtg
gtctgtaactacttcctgtttggtctgaggaatgtctggcagctgctgttccacctggcg
gtggctgtcctcgtcaccctcctcaccctcaaccggaaactacacgacagaaccaatgac
tgtggggtctga
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