Oncorhynchus tshawytscha (Chinook salmon): 112227478
Help
Entry
112227478 CDS
T05605
Symbol
tnfsf10
Name
(RefSeq) tumor necrosis factor ligand superfamily member 10
KO
K04721
tumor necrosis factor ligand superfamily member 10
Organism
otw
Oncorhynchus tshawytscha (Chinook salmon)
Pathway
otw04060
Cytokine-cytokine receptor interaction
otw04068
FoxO signaling pathway
otw04210
Apoptosis
otw04217
Necroptosis
otw05132
Salmonella infection
Brite
KEGG Orthology (KO) [BR:
otw00001
]
09130 Environmental Information Processing
09132 Signal transduction
04068 FoxO signaling pathway
112227478 (tnfsf10)
09133 Signaling molecules and interaction
04060 Cytokine-cytokine receptor interaction
112227478 (tnfsf10)
09140 Cellular Processes
09143 Cell growth and death
04210 Apoptosis
112227478 (tnfsf10)
04217 Necroptosis
112227478 (tnfsf10)
09160 Human Diseases
09171 Infectious disease: bacterial
05132 Salmonella infection
112227478 (tnfsf10)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
otw04147
]
112227478 (tnfsf10)
04052 Cytokines and neuropeptides [BR:
otw04052
]
112227478 (tnfsf10)
04090 CD molecules [BR:
otw04090
]
112227478 (tnfsf10)
Exosome [BR:
otw04147
]
Exosomal proteins
Exosomal proteins of colorectal cancer cells
112227478 (tnfsf10)
Cytokines and neuropeptides [BR:
otw04052
]
Cytokines
Tumor necrosis fators
112227478 (tnfsf10)
CD molecules [BR:
otw04090
]
Proteins
112227478 (tnfsf10)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TNF
Motif
Other DBs
NCBI-GeneID:
112227478
NCBI-ProteinID:
XP_042164486
UniProt:
A0AAZ3PR58
LinkDB
All DBs
Position
LG29:complement(25426896..25437741)
Genome browser
AA seq
291 aa
AA seq
DB search
MAGGSSGVSFLGVLLLAAILVQTVAVTVTVLYFTNVLNTMKEMFARSSVSCLTRADLRGG
HVRSSTEGRGDPCWQVTQQLHILIEKSLSQRYQREISSAVRDEVSRVLPSLVMEDQAPSR
PKVAAHVTGSLAPKAEREGGGSPGRRVQGQKISWWEGHNGLAFLQEVRLVDGELVVPRPG
LYYIYAQTYFRHTHPEGEEGEEEEEEDREQRGRPMLQYVYKKVSSYPVPILLMKTSRTSC
WSRDSQFSLHSAHQGGLFPLAAGDHLLVTVSNASAIDMDERSSFFGAFLVS
NT seq
876 nt
NT seq
+upstream
nt +downstream
nt
atggcgggaggctcaagcggcgtctcatttctcggggttctgctgctcgctgcgattctg
gtgcagaccgtggccgttactgtcaccgtgttatacttcactaatgtcctcaacacgatg
aaggagatgtttgcaaggagcagtgtgtcgtgtctgacacgggccgacctcagaggggga
cacgtacgctcctccaccgaggggagaggagacccctgctggcaggtcacacagcaacta
cacatcctcatagagaagtctttgtctcagcgatatcagagggagatctcctcagcagtt
agagatgaggtgtccagggtgttaccctcactggtgatggaggaccaggctccttctcgc
cccaaagtcgctgcccacgtcactggcagcttggctcccaaagcagagagggagggagga
ggttccccggggcggcgtgtgcaggggcagaagatctcatggtgggaggggcataatggg
ctggcattccttcaggaagtccgattggttgacggggagctggtggtgcctcgcccagga
ctctattatatctatgcccagacctacttcagacacacccaccccgagggagaggagggg
gaggaagaggaggaagaggacagggagcagagggggagacccatgctgcagtatgtctat
aagaaagtgtcctcctacccggtacccatcctgctgatgaagacaagcaggacctcctgc
tggtcccgggactcccagttttctctgcactccgcccaccagggggggctgttcccattg
gctgccggagatcacctcctcgtcaccgttagcaatgcctccgccatcgacatggatgag
aggagcagcttcttcggggctttcctggtcagctag
DBGET
integrated database retrieval system
