Oncorhynchus tshawytscha (Chinook salmon): 112227509
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Entry
112227509 CDS
T05605
Name
(RefSeq) piezo-type mechanosensitive ion channel component 2
KO
K22128
piezo-type mechanosensitive ion channel component 1/2
Organism
otw
Oncorhynchus tshawytscha (Chinook salmon)
Brite
KEGG Orthology (KO) [BR:
otw00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
otw04131
]
112227509
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
otw04040
]
112227509
Membrane trafficking [BR:
otw04131
]
Endoplasmic reticulum (ER) - Golgi transport
Others
Others
112227509
Ion channels [BR:
otw04040
]
Other channels
Mechanosensitive channel (Piezo)
112227509
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Piezo_TM1-24
Piezo_TM25-28
Piezo_cap
Piezo_THU9_anchor
THU_Piezo1
DUF92
FAM210A-B_dom
Motif
Other DBs
NCBI-GeneID:
112227509
NCBI-ProteinID:
XP_042164756
UniProt:
A0A8C8CHH8
LinkDB
All DBs
Position
LG29:19029892..19179524
Genome browser
AA seq
2863 aa
AA seq
DB search
MASQVVCGLIFRLLLPVCLAAACLFRYNALSFIYLIYLLLIPLFPEPTKTTMRGHTGRLL
KSLCFTSVAFLLLHIIYQVTVNSLLAGDNLEPNFNCSTWEKSVRQLGLESVRGADAGNGI
RVFIPDIGMFVAGLVTWLLCLSLEEKQQVKDMSQQHNANCEPDQEKKEDEENEGEKREEV
EEEKREEVEVEEKREEVWMEEDDLVFEEDYEHGDEEMTGDEVEETGEGEEGEGEEEEEST
KMIILRQIAAVASKVKEIIGNLITTAGKVVVTILLGLTGIMLPSLTSAVYFFTFLGLCTW
WSFCRTFHPLIFSCLCVLMAIFSAGHLVVLYLYQFQLFQELIPPGDSYASLFGISSVVQT
DCSYTWMFRVNPALAWHHYVNPIMLLVLYYTLATLIRLWLQDPTDMLISTQDGYGTSEVL
IVTSNGSRPDYVPTSGPLGLDQYSTPQYKPDQPGPDLAERKDSSVYEVAGVRGEGSGEEM
AGGAMATAPVEEGGSPRANAAVTTFRFIMKQSYICALIAMMAWSITYVSWLTFVFLIWSC
TLWMVRDRRKYAMITSPFMVFYGNLLIILQYIWSFEILHPVPGLFLKKEVPFRELGSKML
CLLSFWLLLRQALTERKESQREEVLLDIRVIHAHKNEKEEEVDESGGHREMMQVLGNTLT
AMLNKYWIYICAGMFFFVSFQGRIVMYKIIYMMLLLFCVACYQVHYEWWRRMLKYFWMSV
VFYTMLVLILVYTFQFDSSIHVWSNMTGMSKDKLEDLGLEKFSVPALFMRIFIPTSFLLV
CILHLHYFHQHFLLLTDIKTVADKQKSTITRLVHLDGSLADISLIKPTLTVTTKEEEAGE
KVQLEEEDKEVNRRYEEEEEEMRRYEEPLEHCSKAGSYPCPPKAQPESPVDEMSDLRSKW
YLVVDRLTVLFLKFLQYFQQLQLTVWWLLELHIIKIVSSYILWVSIKEVSLFNYVFLVSW
AFALPFSQFRPLASSVCTVWTCVIIVCKMLYQLTSINPSTYSNNCSMPLNYTDTQRSEMA
HSLLYSAPVDPANWVGLRKFSPLLENLRNNLLILALLAFEVTIYRHQDLYRMSNNLTIPV
TKTIFHDITRQHLDDGILNCAKYFINYFFYKFGLETCFLLAVNVIGQRMDFYAMLHAFGL
IAVIYRRRRKAIAEIWPKYSCFLACMLTFQYFVCIGFPPAACKDYPWRFPSSSTDSNVIK
WLYFPDFHTKPNPLFLLYDFMLLLCASLQRQVFEEENEAAVRLLAGDNVEICRDLDAASF
SQHNPVPDFIHCRSYLDMLKVIMFSYLFWFVLTIIFITGTTRISIFCMGYLVACFYFLLF
GGDLLLKPIKSILHYWDFLIAYNVFVITMKNILSILACGYIKVLVTDHCWLIQLFSLACT
IKGYSKPEQHSHKQCELPSDEAGIIWDSICFAFLLLQRRVFMSYYFLHVVADIRSSQILA
SRGAELFQATIVKAVKARIEVEKKSMDLLKRQMDRIKSRQQKFKRGKERMLSLVQESGDA
KDEEEDDEDKENTDKEKSRGKTKKQWWRPWVDHASMVRSGNYYLFETDSEEEEEEEDKKE
EEPPKKSAFQFVYHAWITDSKTAMKERSKEKRRFWKKYTEGSSSKPRKEDQREAVHVTVE
VEDQKEMEEKKDGPDNILKRVFNIVKFSWVLFLAMLDSFTAWINSMCQEHLDISTVLRIE
RCMLTHEVKKGNKPSRESIHVYYRKQMCKAASIESGLERTEEDTCQDCIPHKAERQSCAY
LESHDPMVSHDSLSSAYTENTLLCSCRSTLDHIDMGPDSIQMPRTSERAHPKLCKMEGLD
LESTSSTDSRDSQASEHTQCTATCSCHGTTNPIKETGEEPGQDLQDPHSSYTETPSTSTS
MGLYLDHEGSLLSRSRGMDWDSRDRVLETEPARWGRGPCYAHHSELQLYQADLSGNTPTD
TDIPPSYSRATGLDREEAEQVSSSRTHHENRLVVVTPDEKSDFLSGVTSTTFPSLTHELT
ASDLLRNRMFYDEELEDSERFYGNQPALLQLLYALYNMLVAHSEMVCFLVIILNHMISAS
VATLVLPILIFLWAMLSVPRPSKRFWMTAIVYTEVTIVIKYFFQFGFFPFNQNIELDMSK
PFHPPNIIGVEKKEGYVHYDLVQLLALFFHRSILKCHGLWDKDDPRGGGGETPKQHHPDR
EKRSSSRRVEKQASGGSSSLLESVRARFPRRFYSLSTSTQLRRKSSSAASHLSQRTLRSG
HSRGDSVSSRQSLRRGNSVRSVQQRSKKEKILDKLREQLIKAKSFIVKKTLEIYIPIRQF
FYNLIHPEYSAVTDVYVLMFLADTVDFIIIVFGFWAFGKHSAAADITSSLSEDQVPEAFL
VMVLIQFGTMIIDRALYLRKTVMGKVIFQVILVFGIHFWMFFILPGVTERRFSKNTVAQL
WYFVKCIYFGLSAYQIRCGYPTRVLGNFLTKSYNYLNLFLFQGFRLVPFLTELRAVMDWV
WTDTTLSLSSWICVEDIYAHIFVLKCWRMSEKRYPQPRGQKKKKVVKYGMGGLIVMLLIC
IVWFPLLFMSLVKSVAGVVNKPLDVSVTITLGGFQPIFTMSAQQNQLKDISKADFSDFMN
SYNYIPSAMQFLEAYTSEDVTVAELEGSSNSLWTISPPSRKNLMDVLSKEEYFPVTMSWT
IQRNLSLGAKAEVATDKHVAYLDMTTRQELVDLLNGTRNQAVVIAQVFPCFLRAPSDSNA
KPIEQLYKDNGYKNILLDLERTHNSSGEIQEWWIVDQPSAGQIQMRGAAVGKKREAGLQL
YVFSDKVSPPSLGFLAGYGIMGLYASVVLVIGKFVREFFSGISHSIMFEELPAVDRILKL
CTDIFLVRETGELELEEDLYAKLIFLYRSPETMIKWTRDQKTK
NT seq
8592 nt
NT seq
+upstream
nt +downstream
nt
atggcttcccaggtggtgtgcggactgatcttcaggctgctgctgccagtttgtctcgct
gcagcgtgtctgttccggtacaatgccctgtccttcatctacctcatctacctcctactc
atcccattgttcccagaacccaccaaaacaacaatgcgaggccacacaggacgcctgctc
aagtccctgtgcttcaccagtgtagccttcctgcttctgcacatcatctaccaggtcacc
gtcaacagtctgctagcaggagacaacctagaacccaacttcaactgttcaacatgggag
aagtcggttcgacagctgggcttggaaagtgtccgaggtgccgatgcaggaaacggaatc
cgtgtgttcatcccagacatcggcatgttcgtggcgggcctggtcacgtggctgctgtgc
ctgagtctggaggagaagcagcaggtgaaagacatgtcgcagcagcacaacgccaactgc
gagccagatcaggaaaagaaagaagacgaggaaaatgagggggagaaaagggaggaggtg
gaggaggagaaaagggaggaggtggaggtggaggagaaaagggaggaggtgtggatggag
gaggacgacctggtgttcgaggaggactatgaacacggggatgaagagatgaccggggac
gaggtggaggagacaggagagggggaagaaggggaaggtgaagaagaggaggagagcact
aagatgataatccttcgtcagatagcggcggtggcgtccaaagtcaaggagatcattggg
aatcttattaccactgcagggaaagtagtggtcaccatattactgggccttacaggcatc
atgctgccctccctgacctctgcggtgtacttcttcaccttcctgggcctgtgtacctgg
tggtccttctgtcggaccttccacccgctcatcttcagctgtctgtgtgtcctcatggcc
atcttcagtgctggacacctggtggttctctacctctaccagttccagctcttccaggag
ctcatcccacccggggatagctacgccagtctgtttggcatctcgtcggtggtacagact
gactgttcctacacctggatgttccgggtcaacccggcgctggcctggcaccactatgtc
aaccccatcatgctgctggtgctctactacactctggccacgcttatacgcctttggctc
caggaccccacagacatgctcatttccacccaagatggatacggcacgtctgaggtgttg
atagtaacctccaacgggtctcgtccggactacgtccccaccagcgggccgctgggactg
gaccagtactctacaccgcagtacaaaccagaccaaccagggccagacctggcagagaga
aaggacagcagtgtgtatgaggtggccggtgtgcgtggcgaaggttcgggagaagagatg
gcgggaggggcgatggcgactgcgccagtggaggaggggggatcgccacgagcaaacgcc
gcggtaacgaccttcaggttcatcatgaagcaaagctacatctgtgctctcatcgcaatg
atggcgtggagtatcacctatgtgagttggctgacctttgtgttcctcatctggtcgtgc
acgctgtggatggtgcgtgaccgacgcaagtacgccatgatcacgtcccccttcatggtg
ttctatgggaacctgttgatcatcctccagtacatctggagcttcgagatcctccacccc
gtgcctgggctcttcttaaagaaagaggtgcccttccgggaactgggctccaagatgctg
tgtctgctgagtttctggctgctgctgagacaggcattgacagagaggaaggagagccag
agagaagaggtgctattggacatcagggtcatccatgcccacaagaacgagaaggaggag
gaggtggatgagagcggtggccacagggagatgatgcaggtgctaggcaacacgctcacg
gccatgctgaacaagtactggatctacatctgcgccggcatgttcttcttcgtcagcttc
cagggacgcatcgtcatgtacaagatcatctacatgatgctgcttctcttctgcgtggct
tgctaccaggtgcactatgagtggtggaggaggatgctgaagtacttctggatgtctgtg
gtgttctacaccatgctggtcctcatcctggtctacaccttccagtttgactcctccatc
cacgtctggtccaacatgaccggcatgagcaaagacaaactggaggacctgggcctggag
aagttctctgtcccggctctgttcatgcggatcttcatccccacctccttcctgttggtc
tgcatcctccacctgcactacttccatcagcacttcctcctgctcactgacatcaagacg
gtggccgacaaacagaagagcacaatcactaggctggtgcacctagatggcagtctggca
gacatctctctgatcaaacccaccctcactgtgaccaccaaagaggaggaggctggggag
aaggtgcagctggaagaggaggataaggaggtgaatagaagatatgaggaggaggaggag
gagatgagaaggtatgaagaaccactggagcactgcagcaaggcggggagctacccctgc
ccccccaaagcacaaccagagtctccggtcgatgagatgtcagacctgaggagtaagtgg
tatctggtggtggaccgcctcacggtgctcttcctcaagttcctgcagtacttccagcag
ctgcagctgaccgtctggtggctcctggagctccacatcatcaagattgtctcctcttac
atcctctgggtctccatcaaagaggtgtctctgttcaactacgtgttcctggtgagttgg
gcgttcgccctgcccttcagtcagttcaggcccctggcctccagcgtctgtaccgtctgg
acctgtgtcatcatcgtctgcaagatgctctaccaactcacctctataaacccctctaca
tactccaacaactgctccatgcctctgaactacacggacacccagaggagtgagatggcc
cactccctgctctacagcgcccctgtggacccagccaactgggtgggcctccgcaagttc
tcccccctactagagaacctgaggaacaacctgttgatactggccctgctggcgttcgag
gtgaccatctaccgtcaccaggacctgtaccgcatgagtaacaacctcaccatccccgtc
accaaaaccatcttccatgatatcacccggcaacacctcgacgacggcatcctcaactgt
gccaagtacttcatcaactacttcttctacaagttcggcctggagacatgcttcctgtta
gcggtgaacgtgattggccagaggatggacttctacgccatgctccatgccttcggtctg
atcgcggtcatctaccgccggcggcgaaaggccattgctgagatctggcccaagtacagc
tgcttcctggcctgcatgctcaccttccagtactttgtctgcatcggcttcccaccggcc
gcctgcaaagactacccatggaggttcccctcatcctccacagactccaacgtcatcaag
tggctctatttccctgacttccacaccaagcccaaccccctgttcctgctctatgacttc
atgctgctgctgtgtgcctcactgcagaggcaggtgtttgaggaggagaacgaggctgcc
gtgcgcctcttggccggggacaacgtggagatctgcagggacctggacgccgcctccttc
agtcagcacaaccccgtccctgacttcatccactgcagatcctacctggacatgctgaag
gtgatcatgttcagctacctcttctggttcgtgctcaccatcatcttcatcacgggcacc
acgcgcatctccatcttctgtatgggctacctggtggcctgtttctactttctgctcttc
gggggcgacctgctgctcaagccaatcaaaagtatcctgcactactgggacttcctgatt
gcctacaacgtgtttgtgatcaccatgaagaacatactctcgatactagcctgtgggtac
ataaaagtcctggtcaccgatcactgttggctcattcagctcttcagcctggcctgcact
ataaagggctattctaaacctgagcagcacagccacaagcagtgtgagttgcctagcgac
gaggcaggcatcatctgggatagcatctgttttgccttcctgttgctacagcgacgtgtt
ttcatgagctactacttcctgcacgtggtcgccgacatccgctcctcacagatcctggcc
tccagaggggctgagctgttccaggcgaccatagtgaaagctgtcaaagcccggatcgaa
gtggagaaaaagtctatggacctactgaagagacaaatggaccgcatcaagagtcggcag
cagaagttcaagagaggcaaggagaggatgttgagcttggtgcaggaaagcggagacgcc
aaggatgaggaggaggatgatgaagataaagaaaatactgacaaagagaagagcaggggg
aagacaaagaagcagtggtggaggccgtgggtggaccatgcatccatggtgagaagtggt
aactattacctgtttgagactgacagtgaagaagaggaggaagaggaggataaaaaggag
gaagagccacccaagaagtctgcatttcagtttgtgtaccatgcctggatcaccgactcc
aagacggctatgaaggagcgcagcaaggagaaacgccgcttctggaagaaatacactgaa
gggagcagcagcaagccaaggaaagaggaccagagggaagctgttcatgttactgttgaa
gtggaggatcaaaaggagatggaggagaagaaagatggaccagacaacatcctgaagcga
gtcttcaacatcgtcaaattctcctgggtgttgttcctggccatgttggacagtttcaca
gcctggatcaattcgatgtgtcaggaacacctggacatctccaccgtgctgcgcattgag
cgctgtatgctcactcacgaggtcaaaaaggggaataagccttcgcgggagagcatccac
gtgtactaccgcaagcagatgtgcaaggctgcgtccattgagtctggcctggagagaacc
gaggaggatacgtgccaggactgcatcccccacaaggccgagcggcagagctgtgcctat
ctggagagccatgaccctatggtgtctcatgacagcctgtccagtgcgtacacagagaac
accctgctctgctcctgtcgttccacactggaccacattgatatgggccctgacagcatc
cagatgcccaggaccagcgagcgtgcccatcctaaactctgcaagatggaaggcctagac
ctagagtccacatcctcaaccgacagcagagacagccaggccagtgagcacacccagtgc
acagccacctgctcctgccatgggaccaccaaccccatcaaagagacaggagaggagcca
ggccaggacctccaggacccccactcctcctacaccgagaccccatccacctccacctcc
atggggctgtacctggaccatgaggggagtcttctctccaggtctaggggaatggactgg
gacagccgggacagggttctagagaccgaacctgcaaggtgggggaggggaccgtgctat
gcccaccacagtgagctccagctctaccaggcagacctctccggtaacacccccacagac
acagacatccccccctcatacagcagagccacaggcctggacagggaggaggccgagcag
gtctcatccagtaggacccatcatgagaacaggctagttgtggtgacgcctgacgagaag
tcagattttctgtcgggcgtcacgagcaccacgtttccctcgctcacccacgagctgacc
gccagcgatctcctacgcaataggatgttctacgacgaggagctggaagactctgagcgt
ttctacggcaaccagccggcgctgctccagctgctctatgctctctacaacatgctggtg
gcccactcagagatggtgtgtttcctggtcatcatcctcaaccacatgatctcagcgtcc
gtggccacgctcgttctgcccatcctcatcttcctctgggccatgctgtctgtcccaagg
cccagcaaacgcttctggatgaccgccatcgtctacaccgaggtcaccatcgtgatcaag
tacttcttccagtttggtttcttccccttcaaccaaaacattgagctggacatgtccaaa
cccttccaccctcccaacatcatcggtgtggagaagaaggaaggatacgtgcactatgac
ctggttcagctgctagctctgttcttccacagatctattctcaagtgtcatgggctgtgg
gacaaggatgaccccaggggaggagggggagaaacccctaagcagcaccaccctgacagg
gagaagaggtccagctccaggcgtgtggagaagcaggcctcggggggcagtagctccctg
ctggaatcggtacgtgcccgcttcccccgccgcttctactccctgtccacctccacccag
ctgcgccgcaagagctccagcgccgcttcccacctctcccagcgcaccctgcgctccggc
cactccagaggagacagcgtgagctcaaggcagagcctacggagagggaacagtgtgagg
agtgtccagcagaggagcaagaaggagaagatcctggacaaactcagagagcagctcatc
aaagccaagagcttcattgtcaagaaaactctggagatctacatccccatccgtcagttc
ttctacaacctgatccacccagagtacagtgctgtgacagatgtgtatgtgctcatgttc
ctggccgacactgttgactttatcatcatcgtctttggcttctgggcttttgggaaacac
tctgccgcagctgacatcacttcctccctgtcggaggaccaggttcctgaggccttcctg
gtgatggtactgatccagtttggcaccatgatcatcgaccgagccctctacctccgcaag
actgtcatgggaaaagtcatcttccaggtcatcctggtgttcggtatccacttctggatg
ttcttcattctgcctggagtcacagaaagacggttcagtaagaacacagtggcccagctg
tggtactttgtcaagtgcatctactttggcctgtcggcctatcagatccgctgtggctac
cccacccgtgtcctgggcaactttctcaccaagagttacaactacctcaacctattcctc
ttccaagggttccgcctggtcccgttcctgacagagctgcgagcggtgatggactgggtg
tggacggacaccactctcagcttgtccagctggatctgtgtagaggacatctacgctcac
atctttgttctcaagtgctggaggatgtcagagaagaggtacccccagcctcgcgggcag
aagaagaagaaggtggtgaagtatgggatgggaggtttgattgtcatgctgctcatctgc
atcgtttggttccccctgcttttcatgtcgctggtcaagtccgtggccggggtggtcaac
aaacctctggacgtatcggtcaccatcaccctgggaggctttcagcccatcttcactatg
agtgcccagcaaaatcagctgaaggacatcagcaaagcagatttttcagacttcatgaat
tcgtacaactacattccgtcagcgatgcagttcttggaggcatacacgtcagaggatgtg
actgtggcggagctggagggtagttccaattccttgtggaccatcagcccccccagcagg
aagaaccttatggatgttctcagcaaggaggaatacttccctgtcaccatgtcctggacc
atccagaggaatctcagtcttggagccaaagctgaagttgcgacagataaacatgtagca
taccttgatatgacaacacgacaagagttagtagatctcctgaatgggaccagaaaccag
gctgtggtcatagcacaagtcttcccatgcttcctcagagctcccagtgactccaatgcc
aaacctatagaacaactctataaagacaacggctacaagaacatcctgctcgacctggag
agaacccacaacagcagtggtgagatccaggagtggtggatcgtagaccagccatcggcg
ggacagatccagatgaggggtgcggcggtggggaagaagagagaggcaggcctccagctc
tacgtgtttagtgacaaagtcagcccgcccagtctgggcttcctggcaggatacgggatc
atgggcctgtatgcatcggtggtgctggtcatcggcaagtttgtgcgcgagttctttagc
ggcatctcccattccatcatgtttgaggagctgcccgctgtggaccgcatcctgaagctg
tgtaccgacatcttcctggtcagagagacgggcgagctggagctggaggaagacctttat
gccaagctcatctttctctaccgctcaccagagactatgatcaagtggaccagggaccaa
aaaactaaatga
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integrated database retrieval system
