Oncorhynchus tshawytscha (Chinook salmon): 112227581
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Entry
112227581 CDS
T05605
Name
(RefSeq) rho GTPase-activating protein 21-like isoform X1
KO
K20315
Rho GTPase-activating protein 21/23
Organism
otw
Oncorhynchus tshawytscha (Chinook salmon)
Brite
KEGG Orthology (KO) [BR:
otw00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
otw04131
]
112227581
Membrane trafficking [BR:
otw04131
]
Endosome - Golgi transport
Others
Others
112227581
Others
Rho GTPase associated proteins
Rho GTPase-activating proteins
112227581
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RhoGAP
PH_9
PH
PDZ_6
PDZ
PDZ_2
PH_11
Motif
Other DBs
NCBI-GeneID:
112227581
NCBI-ProteinID:
XP_042164855
LinkDB
All DBs
Position
LG29:complement(14212132..14331869)
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AA seq
2087 aa
AA seq
DB search
MLAQRNGGVSAGSCVTTVPLKDCPDLVDLLDVEVDCSTSTGDCPWARLAGLECCLSEPYC
LWFQLLAQAYWGDVELGLRGETDRRVSWGRLQEASRRNCVRSRAKQKDGRDQSEASATGS
PVGVEEEPFSWPGPKTLRLQRTSQGFGFTLRHFIVYPPESAVHSSLKDEDNGSRGRQRNR
LEPMDTIFVKQVKEGGPAHGAGLCTGDRIVKVNRESIIGKTYSQVIALIQNSDTSLELCV
MPKDEDILQLFSRDITALAYSQDAYLKGNEAYSGNALHIPEPPPICYPRIEPKAPGMAQA
LDLSPSTEASRSGRPAQAGAGRQGTSTAGHTDMGYRLEIPVPPSPPPQSPKTQTVVCVCN
ESVRTVVVPPDPVPDRGPRCVSRAGPSHRTDENRFGSPLGLSTRPRILVTPGPPGSSQLQ
YTPIPTRPTESSVFSPSGSRPSPIYPDKHHLTPSPQTTVADTLPSPTTPNHYIPSPSSPA
TSNSPHQNIDWRNYTTYKDYIDAKRLHTYGCRTIQERLDSLRAAANPNAAYALQPGPPSA
SASSQGLGGSQIRRRSTSHDRGSYQGSTVAPLRSASQERLGGGGPERTAMPRDWPRSASQ
DALPSSALMGVAKPRARSCDYLGRQGEPAAMVSTERGVGGYSRAELEDSLLLYRGEEASR
HGAVLKQLPQPHRTSLTGMPISAPMFTKGTTEPLFPSRTDSLAQTALSRPSRLPVKNSTS
DPSPLSLPSTRGPSNSSAMDLLKDQRAMVVGNHLGYSSSPLQQLQLRGRADSLREESGRD
VGLGARSSSCSGPSKVPVQRQQATSSSTSTSSSTVNSTVTLRSKVPALVRTSGRPLEGVE
GPDATVVVLRRDKNSGPQPIRHPSYILAVNDADLETPIEVETLAAKRGSGGWLSNDVQRD
VTMRRLGEQHKASCASNLDDSLDSIPFIDEPSSPSIDHDTSHIPASAVISVTPIVTTIPP
SPTSPSPLIRRQRSHDHDSLRLTAIESDSGTKTERSKSYDEGLDNYREGRQIPGLKGLRK
ATVDRSSEDSGSRRDSSSDIFSDASKEGMLHFRQINTDKSKRVGGGMRPWKQMYAVLRGH
FLCLYKDKKEGQAHANSQVEDEPQPISIKACLIDISYSDTKRKNVLRLTTSDCEYLFQAE
DREDMLAWIRVIQENSNLDEENAAFTSRDLISRKIKEYNTLMSPTGSKNEPSPKPSRQSL
SIRQTLLGGKGETKSLSPHLPKAEQERKNMHKDDTSPPKDKGTWRKGIPGLMRKPFERKP
SPGITFGVRLDDCPPAVTNRFVPLIVEVCCNLVEERGLEYTGIYRVPGNNAAISNMQEEL
NNKGMNDIDIQDDKWRDLNVISSLLKSFFRKLPEPLFTNEKYADFIEANRTVDPVERLKL
LKRMLHELPDHHYETLKFLSAHLKTVADNSDKNKMEPRNLAIVFGPTLVRTSEDNMTHMV
THMPDQYKIVETLIQHYNWFFTEEGNGEPVTMSRYENAVESQPVPNIDHLLNNIGRMAST
QGEVSGNVFPGPDRLCGDSPTSDSAKSKGSWGSGKDQCSREHLVSSIFAAANRKRKKPKD
KPQLSSSDDDLDSVFPKKELPGQKQNHRGLEVEQGISVSPEAKEQAKTGEENGRSIELTP
KGKKEHRNSFFLREKPLSRQSSPAPSLKNSGSPRLSYRTAQLGKPSFSDTPSHLDEPISD
LGTMSSGASMPRARPKKWVSGAAAPDLSVAGAGASAGAEVSSITSDYSTTSSITFLTAAD
SSALSPEVQGGDEADDERSELISEGRPMETDSESDFPVFATGGGNVQIMPVLVQNQTGHG
PEKPDPAAADGKTTPKLEPRRLFPSHRLIECDTLSRRRSLRQKTDSESSVEGGTGSGERV
EGRSEPTRLSRVLEVMKKGQSTSSLNSSSRSESERPPEPALRLNITERLKFRLRTSADDM
FGVGAQKSQSSPETRSKKKNIRRRHTMGGQRDFAELAVINDWREQGGVDQAAELSAMDRL
KPKCSSQDFSIRDWIARERCRAGVSEFSMDSPPKVVPEGNRAQAQGTTPERPSPSGSPCL
QPMVGEQVNGGGPQGRNKASLNLAADDAHPHKLSGAQVVRSRFYQYL
NT seq
6264 nt
NT seq
+upstream
nt +downstream
nt
atgctggcccagaggaacgggggcgtctccgccgggagctgtgtgactacggtgcccctg
aaggattgccctgacctggtggatctgctggatgtagaggtggactgctctacctcgacg
ggggactgtccctgggctcgtctggccggtttagaatgctgcctgtcggagccctactgc
ctgtggttccagctgctagcgcaggcttactggggggacgtggagctaggcctcaggggg
gaaacagacaggagagtgtcctggggcagactccaagaagcatccaggaggaactgtgtt
cgttccagggctaaacagaaggatgggcgtgaccagagcgaggcatctgcgacggggtcc
ccggttggggtggaagaggagcccttctcctggccgggccccaagacacttcggctgcag
cgcacttcgcagggcttcggcttcacgctgcgccacttcatcgtctacccgccagagtca
gccgtccactcttccctcaaggatgaagacaatggcagtcgagggagacagaggaacagg
ctggagccaatggacaccatcttcgtcaagcaagtgaaggagggaggccctgcccacgga
gctggactctgtacaggggaccggattgtaaaggtgaacagagaaagtatcattggaaag
acgtactcccaagtgatcgctttgatacagaacagcgacacctcgttggaactatgtgtg
atgccaaaagatgaggacattttgcagttgttttccagggatatcactgctctggcctat
tcccaagatgcatacctcaaagggaacgaggcatacagcggaaacgccctacacatcccg
gagcctcctcccatatgctacccgaggatagagcctaaagccccagggatggcccaggcc
ctggacctatccccctccacagaggcctcccggagcggcaggccggcccaggcaggggca
gggagacagggtacctccacggcaggccacacagacatgggctaccggttggagatccct
gtccccccttctcctcccccgcagtcccctaaaacccagacggtggtttgtgtgtgcaat
gagagtgtgaggacagtggtggtgccgcctgacccagtaccggatcgggggccccgttgt
gtgtctcgggctggccccagccataggaccgacgagaaccgtttcggaagtcccctgggc
ctctcaaccaggcctagaatccttgtgacccctggcccccctggaagttcacaactacaa
tatacccccatccccacccggcccacagagtcctcagtcttctccccctctggctctagg
ccttccccaatctaccctgacaaacaccacctcaccccttccccacaaaccacggtggcc
gacaccttaccctcccccaccacgcccaaccactacatcccctcaccctcctctcctgcc
acgtccaactcacctcaccagaacatcgactggcgcaactacaccacctacaaggactac
atcgacgccaagcggctgcacacctatggctgccgcaccatccaggagcgtctagacagc
ctgcgggcggcggccaaccccaacgccgcttacgcactgcagcctggtcctcccagtgcc
agtgcctcctcccaaggcctgggggggtcccagattagacgcaggagcacgtcccacgat
cggggatcctaccaggggtccactgtggctccactgcgcagtgcctcccaggagaggcta
ggtgggggagggcccgagaggacagccatgcccagggactggccccggagtgcctcccag
gatgccctaccctcctcagccctcatgggagtggccaagccccgggcacgctcctgcgac
tacctgggccggcagggcgagcccgcggcaatggtatctacagagaggggagtgggaggg
tacagcagggcagagctggaggatagcctgctactatacaggggtgaggaggccagcaga
cacggggcagtgctgaaacaactaccccagcctcacaggaccagccttacaggcatgccc
atctctgccccgatgttcactaaaggtacgacagagccgttgttcccctctaggacagac
agccttgcacagacagccctcagtaggccctcgcggttgcctgttaaaaactccacctcg
gacccatcgccactctccttaccttctacccggggccccagtaacagcagtgctatggac
ctgctcaaagaccaaagagccatggtggtgggtaaccacctgggctactcttcctcgccc
ctgcagcagctacagctccgggggcgggcagacagcctgagagaggagagcgggagggat
gtggggctgggtgccaggtcctcctcctgctccggcccctccaaagtccctgttcagaga
cagcaggccacctcctcctctacctccacttcctcctccactgttaacagtactgtgacc
ctcaggtcaaaggtccccgccctggtgcggactagcgggaggccgttggagggtgtagaa
gggccggacgccactgtggtggtcctgagaagggataagaactcgggaccccagcccatc
cgccacccttcctacatcctggctgtaaacgacgccgacttggagactccaatagaggtg
gagactctagcagctaagaggggatcggggggctggctatccaacgacgtccagcgagac
gtgaccatgagaaggctgggagagcagcacaaggcctcgtgcgccagcaacctggacgac
tcactcgactccatccccttcatcgatgagccttccagtccaagtattgatcatgacacc
agtcacattcccgcttcagctgtaatatctgttactccaatcgtcaccaccataccaccc
agccctacctctccatctcctcttattcgacgacagcggtcacatgaccacgattctctt
agactcacagcgattgaatcggattctggtaccaaaacggagaggtccaaatcctacgat
gaaggtctggataactacagggaagggaggcaaatacctggtctaaagggccttaggaag
gcgacggtggacaggtcttcagaagattccggatccaggagagattcctcatcagatatc
ttcagtgatgcttccaaggagggcatgctccacttccgacagatcaacacggacaagagc
aagcgtgttggtgggggaatgcgcccctggaaacagatgtacgcagtgctgcgaggccac
ttcctctgcctatataaggacaaaaaggagggacaggctcatgccaactcccaggtggag
gacgagccacagccaatcagcatcaaggcctgtctgattgacatctcctacagcgacacg
aaacgcaagaacgtgctgcggctgaccacgtcggactgtgagtacctgttccaggcagag
gacagagaagatatgctggcctggatcagagtcatacaggagaacagcaacctggacgag
gagaacgcagcctttaccagccgtgacctcatcagccgaaagatcaaggagtacaacacg
ttgatgagcccgacaggcagtaagaacgaaccgtcgcccaaaccgtcacgccagtcgctg
agcatcagacagacgctactaggagggaagggggagaccaaatctctaagtccacactta
cccaaagcagagcaggagaggaaaaacatgcacaaagacgacaccagtccacccaaggac
aaggggacgtggaggaaaggtatcccagggctgatgaggaagccctttgagaggaagcct
tctccaggcatcactttcggggtgaggctggacgactgccccccagctgtcaccaacagg
tttgttcccctcattgtggaggtgtgctgtaacctagtggaggagagggggctggagtac
acagggatctacagagtcccagggaacaacgcagccatctccaacatgcaggaggagctc
aacaacaaaggcatgaacgacattgacatccaggatgacaaatggagggatctgaatgtg
atcagcagtttacttaaatcctttttccggaaacttccagagcctttgttcaccaacgag
aagtatgcagacttcatagaggccaacaggacagtggacccagtggaaagactgaaattg
ttgaagaggatgcttcacgagttgccagatcatcactatgagaccctcaagttcctctcg
gctcatctgaaaacagtggctgacaactctgataaaaataagatggaacctaggaacctg
gccatcgtgtttggtcccactctggtgcgcacttcagaggacaacatgacccacatggtc
acccacatgcccgaccagtacaagatcgtagagactctcattcagcattacaactggttt
ttcacagaggaaggcaatggggagccagtgacaatgtcccgatatgagaatgcggtggag
tctcagcctgtgcccaacatcgaccacctgctcaacaacatcggccgcatggcctccacg
cagggggaagtctcaggtaacgtgttccctggaccagaccgactctgtggtgattcaccc
actagtgactctgctaaatcgaagggttcctgggggtccgggaaggaccagtgcagccgc
gagcacctggtctcctcgatctttgctgcagccaaccgcaaaagaaagaagcccaaggac
aagccgcagcttagcagctctgatgatgacctagactcagtgttccctaaaaaggagctc
cctggccagaagcagaatcacagaggcctggaggtggagcaaggaatcagtgtcagccct
gaagcaaaagagcaagcaaaaacaggagaggagaatggaagaagtattgagctcacgccc
aaaggcaaaaaggagcacaggaactctttctttttaagggaaaagcccttgtcaaggcag
tcctcacctgccccctcactcaaaaactctggctcccccagactcagttaccgcacagct
cagcttggaaagccctctttttcggacaccccgtcccatctggatgagcccatttctgat
ctgggcaccatgagctctggggcttccatgcccagggcacgaccaaagaagtgggtgtca
ggagctgctgctcctgatctatcggtggctggggctggggcgtcagctggggcagaggtg
agctccatcacctcagactattccaccacctcgtccatcaccttcctgactgcagcagac
tctagcgcactcagtccagaggttcagggtggggacgaggcagatgacgagcgcagcgag
cttatcagtgaaggccggcccatggagactgacagcgaaagcgacttccctgtgtttgct
acggggggcggcaatgtccaaatcatgcctgtcttagtgcagaaccagactgggcatggg
ccagaaaagcctgatcctgcagcagctgatgggaagacgactcctaaactggaaccccgt
cgcctctttccctcccacaggctgattgagtgtgacacactctccaggaggcggtccctg
cgacagaagacggatagcgagtcatcagtagagggtgggactggcagcggggaacgtgtc
gagggcaggtcggagccaacacgactgtctcgtgtcttggaggtgatgaagaaggggcag
tctaccagcagcctcaactcttcctcccgcagtgagtcggagcgccctcccgagcctgcc
ttgcgcctcaatatcacagaaaggctcaagttccgtctgcgcacatctgctgatgacatg
tttggcgtgggtgcccagaagagccagtcttccccagagacgcgcagcaagaagaaaaac
atccgtcgtaggcacaccatggggggccaacgggactttgcagaactggccgtcatcaac
gactggagggagcaaggcggggtggaccaggcggctgagctgtcagccatggaccgcctc
aagccaaagtgctcctctcaggacttctccattcgggactggatcgcccgcgagcgctgt
cgggccggagtgtcagagttcagcatggacagcccacccaaagttgtccccgaggggaat
agggcacaagcccagggtaccaccccagagagaccctctccctctggctccccatgcctt
cagcccatggtgggggagcaagtgaacggaggtgggccgcaaggcagaaacaaagccagc
ctcaacctggcggctgacgacgcgcacccacacaaactatcaggagcacaagttgtccgc
tcgcgattctatcagtatctatga
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