Oncorhynchus tshawytscha (Chinook salmon): 112227586
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Entry
112227586 CDS
T05605
Symbol
pou6f2
Name
(RefSeq) POU domain, class 6, transcription factor 2
KO
K09368
POU domain transcription factor, class 6
Organism
otw
Oncorhynchus tshawytscha (Chinook salmon)
Brite
KEGG Orthology (KO) [BR:
otw00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
otw03000
]
112227586 (pou6f2)
Transcription factors [BR:
otw03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain POU
112227586 (pou6f2)
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Gene cluster
GFIT
Motif
Pfam:
Pou
Homeodomain
Homeobox_KN
HOCHOB
CAF20
FtsX_ECD
Motif
Other DBs
NCBI-GeneID:
112227586
NCBI-ProteinID:
XP_042164845
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All DBs
Position
LG29:11042494..11132401
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AA seq
671 aa
AA seq
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MITGQLSKPLLSLRSEMSVAELRAEDKAATPDSELNDESLLLSSEARDREDIPNKLYGAR
DGSVQSDTSSSPSEQSQLGQCHPAYPVGPQSLLVAQQLAQQLAGGSPGLNQPILIPFNTG
GHLGGQQGLVLSLPTANIQGLMAAAAAQGIMTLPLQNLQATSSLNSQLQHLQQLQQIQQH
HQQQQQHHHQQQQHHQQHQHSHSHVHNQLSSRGHMTSPSLQPSSVSVPSPGSASSTTSMT
GSGQPPLSPPLRQNQSPARSLPSPVTPPMPLQLNPLASQAAVAAAAAAMGSMAGSQVFGN
TLSNLQAGVTGQLVTNAQGQIIGTIPLMPNSGGPSSQSGGVNPALQVQPITPQLLTNAQG
QIIATVIGNQILPVINTQGITLSPIKPGQQLPQAQHVQTGPLSSQPNLLHMPHSQSPLRQ
ASSSSSSSSSSSALSVGQLVSNPQTAASEVDGVNLEEIREFAKAFKIRRLSLGLTQTQVG
QALSAAEGPAYSQSAICRHTILRSHFFLPQEAQENPIGSSLTGKLNPGLLYPARFEKLDI
TPKSAQKIKPVLERWMAEAEARHRSGMQNLTEFIGSEPSKKRKRRTSFTPQALEILNSHF
EKNTHPSGQEMTEIAEKLNYDREVVRVWFCNKRQALKNTIKRLKQPGDLDLDLGPTAPMD
PLSDSLEELPK
NT seq
2016 nt
NT seq
+upstream
nt +downstream
nt
atgattacagggcagctgagcaaaccgctgctctccctgcgcagcgagatgagcgtggcg
gaactccgggccgaggacaaagcggccaccccagatagcgagctcaacgacgagtccctg
ctcctgtcctccgaggccagggacagagaggacattcccaacaagctctatggagcccgt
gatggctctgtccagtctgataccagcagcagcccgtcagaacagagtcagctgggacag
tgtcacccagcctacccagtgggaccacagtctctgctggtggctcagcaactagcccag
cagctggccggggggtctccaggcctgaaccagcccatcctcatccccttcaatacaggc
ggccacctgggaggccagcaggggctggtgctctcgctgcccacggccaacatccagggc
ctgatggctgcagcagccgcacagggcatcatgacccttcccctacagaacctgcaagct
acctcatccctgaactcccagcttcagcacctgcagcagcttcaacagatacaacagcac
caccagcagcaacaacagcaccatcaccaacaacagcaacaccatcagcagcatcaacac
tcccacagccacgtccacaaccagctgtcgtcgcggggtcacatgacctcgcccagccta
cagccatcctccgtctcagtcccctcccctggctccgcctcctccaccacctccatgacc
ggctcgggccaacccccgctgtctccgccgctcaggcagaaccagtcaccggccagaagc
ctgccctcgcccgtcacaccgcccatgccactgcagttgaaccctctggccagccaggct
gcggtggcggcagcagcagcagctatgggctctatggccggatcccaggtctttggcaac
accctctccaacctgcaagctggagtcacggggcaactggtcactaatgcacaaggacag
ataattggaacgatcccacttatgcccaactctggggggccctcgagccaatcagggggc
gtaaacccagcgctgcaggtccagccaattacaccccagcttctgaccaacgcccagggc
cagatcatcgccacggtgatcggcaatcaaatcctgcctgtcatcaacacccagggaatc
acactgtcaccaatcaagcctggacagcagctgcctcaggctcagcatgttcagacaggc
ccattgtcgtctcagcccaacctgctccacatgccccacagccagagtcctctccgccag
gcctcttcctcctcctcgtcctcatcttcctcctctgccctcagcgtgggtcagctggtc
agcaacccccagacggccgccagcgaagtggatggggtcaacctggaggagattcgggag
ttcgccaaagcgttcaaaatccgccgcttgtccctggggctgacccagacgcaggtgggt
caggcactcagcgcggccgagggcccggcctatagtcagtctgccatctgcagacacacc
atcctgagaagccactttttcctaccacaggaagcccaagaaaaccctataggtagcagt
ctgacaggcaaactgaaccctggccttttatatcctgccaggtttgagaagttggacatc
accccaaaaagcgcccagaagattaagccggttctggaacgctggatggccgaggccgag
gcccgccaccggtccggcatgcagaacctgaccgagtttatcggcagtgagccctccaaa
aaacgcaagcggaggacctctttcaccccacaagcgctggagatcctcaacagccacttt
gagaagaacacgcacccctctggacaggaaatgaccgagatagccgagaaactgaactat
gaccgcgaggtggtccgcgtctggttctgcaacaagaggcaagcgttgaaaaacacaata
aagcggttgaaacagcccggggatctggacctggacctcggcccgaccgcgcccatggac
cctctctctgattctctggaagagctccctaaatga
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