Oncorhynchus tshawytscha (Chinook salmon): 112227624
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Entry
112227624 CDS
T05605
Symbol
abcd3a
Name
(RefSeq) ATP-binding cassette sub-family D member 3a
KO
K05677
ATP-binding cassette, subfamily D (ALD), member 3 [EC:
7.6.2.4
]
Organism
otw
Oncorhynchus tshawytscha (Chinook salmon)
Pathway
otw02010
ABC transporters
otw04146
Peroxisome
Brite
KEGG Orthology (KO) [BR:
otw00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
112227624 (abcd3a)
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
112227624 (abcd3a)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
otw02000
]
112227624 (abcd3a)
Enzymes [BR:
otw01000
]
7. Translocases
7.6 Catalysing the translocation of other compounds
7.6.2 Linked to the hydrolysis of a nucleoside triphosphate
7.6.2.4 ABC-type fatty-acyl-CoA transporter
112227624 (abcd3a)
Transporters [BR:
otw02000
]
ABC transporters, eukaryotic type
ABCD (ALD) subfamily
ABCD3 subgroup
112227624 (abcd3a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_membrane_2
ABC_tran
SMC_N
AAA_23
BrxL_ATPase
AAA_21
AAA_29
Rad17
AAA_27
AAA_5
AAA_16
nSTAND1
Motif
Other DBs
NCBI-GeneID:
112227624
NCBI-ProteinID:
XP_024248185
UniProt:
A0A8C8CC70
LinkDB
All DBs
Position
LG29:32776015..32796993
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AA seq
661 aa
AA seq
DB search
MAAVSKYLTAKNSSIAGGVLLVLYILKQRRRRGGKSSGKKGRSELVLSNDDKAAKKDRAA
VDYVFFLRISKIIRIMVPRWFCKETGYLVLIAAMLVARTYCDVWMIQNGTMIESAIIGRS
NTDFKNYLFNFCKVMPLIALVNNFLKLGLNELKLRFRVRLTKHLYDEYLKGYTYYKMGNL
DNRIANADQLLTQDVERFCNSVVDLYSNLSKPLLDIGLYIFKLTSAIGAQGPASMMTYLL
VSGLFLTRLRRPIGKMTVTEQRYEGEYRYVNSRLITNSEEIAFYNGNMREKQTIHSTFKK
LVDHLHKFIFFRFSMGFVDSLIAKYIATVVGYLVVSRPFLNLADPRHMNSSQPELLEDYY
QSGRMLLRMSQALGRIVLAGREMTRLSGFTMRITELMKVLKELNSGTYERTMVSHQDKES
EAVERVPLVPGSGQIINVDHIIKFEHTPLATPNGDILIKDLTFEVRSGTNVLVCGPNGCG
KSSLFRVLGELWPLFGGQLTKPERGKLFYVPQRPYMTLGTLRDQVIYPDTYEEQKRKGIS
DQVLKEYLDNVQLGHILDREGTWDTVQDWMDVLSGGEKQRMAMARLFYHKPQFAILDECT
SAVSVDVEDFIYSHCRTVGISLFTVSHRKSLWKHHEYYLHMDGRGNYDFKPITEETIEFG
S
NT seq
1986 nt
NT seq
+upstream
nt +downstream
nt
atggcggccgtcagtaagtacctgacagctaaaaactcttcgatagctggcggagtccta
ctcgttttatacatcctgaagcaaagaaggagaagaggaggcaagtcaagcggtaaaaaa
ggacgctcagaactggtgttgagcaatgacgacaaagcagccaagaaagaccgtgctgcg
gtggactatgtcttcttcctcagaatcagtaagatcatccggatcatggtgcctcgatgg
ttctgcaaagagacaggataccttgtcctcatagctgccatgttggtggccaggacatat
tgtgatgtctggatgatccagaatggaaccatgattgaaagcgcaattatcggtcgttcc
aacaccgatttcaagaactacttgttcaacttttgcaaagtcatgccacttattgcattg
gtgaataacttcttgaagctgggtctgaatgagctgaagctgaggttcagagtgaggcta
accaaacacctctacgacgagtacctcaaaggatacacgtactacaaaatgggcaacctg
gataaccgtatcgctaacgctgaccagctgctgactcaggatgtagagaggttctgtaac
agcgtggtggacctctactccaacctcagcaagcctctcttggacattggactgtacatc
ttcaagctgacgtctgccatcggtgcccagggcccagcgagtatgatgacctacctgctg
gtctcaggcctgttcctgaccagactacgacggcccatcggtaagatgacggtgacagag
cagcgctacgagggagagtaccgatatgtcaactcgcgactcatcaccaacagtgaggag
attgccttctacaatgggaacatgagagagaaacagaccattcactcaacatttaagaaa
ctggtcgaccatttgcacaagtttatcttcttccgtttctccatgggctttgtggacagc
ctgatcgcaaagtacatagccactgtggtgggctacctggtggtgagtcggcccttcctc
aacctcgccgacccccgccacatgaacagcagccaacctgagttgctggaggactattac
cagagtggcaggatgctactgaggatgtcccaggctctgggaaggatcgtactagctggt
agagagatgaccaggctctctgggttcaccatgcgtatcactgagctcatgaaggtcctg
aaggaactgaactcggggacgtacgaacgcaccatggtctctcatcaggacaaggaatca
gaagctgtagaaagagtccctcttgtcccgggcagcggacagatcatcaacgttgaccac
atcatcaagtttgaacacacaccactggcaacacccaatggagatatcctgatcaaggac
ctgacctttgaagtgaggtctggtaccaacgtgttagtgtgtgggcccaatggctgtggc
aagagttcactcttcagagtcctgggagagctctggcctctgtttggaggacagctgacc
aagcctgagagagggaagctcttctatgttcctcagagaccgtatatgacccttggcacc
ctgagggatcaggtgatttaccctgacacctatgaggaacagaagagaaaaggaatctct
gaccaggtgttgaaggagtacctggacaatgtccagctgggtcacatcctggacagggag
gggacctgggacaccgtacaggactggatggatgtcctcagtggaggagagaagcaaagg
atggcgatggctcggttgttctaccacaagccccagtttgcaatcctggatgagtgcacc
agtgctgtgagcgttgatgtggaggacttcatctacagccactgcagaacggttggcatc
agtctgttcaccgtctctcacaggaagtctttgtggaaacatcacgagtactaccttcac
atggatgggagagggaactatgacttcaaacccatcactgaggagaccattgagtttggc
tcctag
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