Oncorhynchus tshawytscha (Chinook salmon): 112227625
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Entry
112227625 CDS
T05605
Name
(RefSeq) transforming growth factor beta activator LRRC33 isoform X1
KO
K26317
transforming growth factor beta activator LRRC33
Organism
otw
Oncorhynchus tshawytscha (Chinook salmon)
Pathway
otw04350
TGF-beta signaling pathway
Brite
KEGG Orthology (KO) [BR:
otw00001
]
09130 Environmental Information Processing
09132 Signal transduction
04350 TGF-beta signaling pathway
112227625
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Gene cluster
GFIT
Motif
Pfam:
LRR_8
LRR_4
LRR_1
LRR_5
LRR_EndoS
LRR_NXF1-5
LRR_9
LRR_LRWD1
Motif
Other DBs
NCBI-GeneID:
112227625
NCBI-ProteinID:
XP_024248186
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Position
LG29:31279204..31294041
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AA seq
757 aa
AA seq
DB search
MHGSACVENTRHSTDQRCIVHNRRYGQQLDRQWLEGPTSNHQTRMFRCSSTASSPTLLCL
TLWPLWSLLMSAFCHPHHSPCILTQKTALCSNSELSSVPGGLPDSIEDLHLNHNHIQMLQ
DDSLSRYVSLRTLSCADNLLETVGSKLFHNSPHLESLNLAANNLHVGYQQTSLALLTLSR
LRVLDLSKNRLTEDMVSVLLQNMTSLEYLNLSRNLLLRLDESSFSDLHQLRELDLQRNML
FEIDGSFDHLHKLQRLNLAFNYLPCLVHFHMTQLVVLNASHNAIEWFIANQDLQEVFQLE
TLDLTDNNLLFFPFLPTHSRLRNLHLSQNRVSFYEHLADTFAYPNWKTSVQFYNLRGNMS
NVTAKLWDESLHGDISSLDLLDLSGNQVHYFPQGFISKMPSLTRLRMWTNCLEVLNLTLE
KLPGTLYELDVSNNRLTELHADQVSLRKLGNLSFLNLSQNDLQTLPAQLLSSLTSISSVD
ISYNRVGVCPLEAGGGGMGGVNQSDCVVCRNIISLRYLYLSGCNLGRLPSSAFVGTPLTH
LELSNNPELIIGPRSIAGLSRTLHHLGLGNTGLRHFDFSPFHHLKSLNISRNSLTQLPAS
LLRLELKLLDLRDNKLTTVPSAQANVLATKLHTVFLNGNTFNCCQLDWYRTFEKTVTIMD
LSDISCQDLTKRTHRVVLVDSLICGGSEGESVYWYILLFIVPVLCLVGMAVIFLLTFRPR
LLPTAVRNKCWSHLPCVVEEKSQKEDTGRVQIPILEI
NT seq
2274 nt
NT seq
+upstream
nt +downstream
nt
atgcacggctctgcatgtgtagagaacacacgccactcgaccgaccagcgctgcatcgta
cacaaccggagatatggtcaacagctcgaccgacagtggcttgaaggacccacatctaac
caccagaccaggatgtttagatgttcatccacggcctcctcccctaccctgctctgtcta
accctctggcccctgtggagcctcctgatgtctgccttctgccaccctcaccacagcccc
tgcatactgacccaaaagactgctctctgtagcaacagtgagctctcatctgtacctggt
ggcctacctgacagcatagaggacctccacctgaaccacaaccacattcagatgctacaa
gatgactctctctcccgctacgtctcccttcgtaccctaagctgtgcagacaacctcttg
gagacggtggggtccaagctatttcacaactcacctcatctagagagcctcaatctagct
gccaataaccttcacgttggataccagcaaactagcctggcgctgctcaccttgtctaga
ctcagagttctggatctgtcaaaaaatcggcttacagaggacatggtctccgtccttctc
cagaacatgacgtccctggagtacctcaacctttccaggaacctcctgctgaggctggac
gaaagctccttcagcgacctccaccagctcagagagctggacctgcagaggaacatgctg
tttgagattgacgggtccttcgatcacctgcacaagctccagagactcaacctggccttc
aactacctgccctgcctggtgcacttccacatgacccagctggtggtcctcaatgccagt
cacaatgccattgagtggttcatagccaaccaggacctccaggaagtcttccagctggag
accctggatctcacagacaacaacctcctcttctttccctttctgcccacccacagccgc
ctgaggaacctccatctgtcccagaacagggtgagcttctacgaacacctggcggacaca
tttgcctaccccaactggaagaccagcgtccagttctacaacctgaggggcaacatgagc
aacgtcacggccaagttgtgggacgagagcctgcacggggacatctcctctctagacctg
ctggatctgagtggaaatcaggtgcactacttcccccaaggattcatcagcaaaatgcca
agcctgaccagactcaggatgtggacaaactgtcttgaggtcttgaatctaactctggaa
aagctgccggggacgttgtacgagttggacgtgagcaacaataggttgacagagctccat
gccgaccaagttagtttgaggaagttaggcaacctaagctttctgaacctgagccagaat
gacctgcagactctacctgctcagctgttgtcctctctcaccagcatcagctctgtggat
attagctacaacagagttggcgtgtgcccccttgaagcagggggtgggggcatgggtggg
gttaaccaatcagactgtgtcgtttgtagaaacatcatttctctgagatatctctaccta
tcggggtgcaacctggggaggctgccatcatcagcgttcgtagggacgcccctaacacac
ctggagctgtctaacaacccagaactcatcatcgggcccagatcgatcgcaggcctcagc
agaactttacaccatctaggattgggaaacacaggcctgcgacactttgacttctctcct
ttccaccacttgaagtctttgaacatttccagaaactctcttactcagctccctgcttca
ctgctacgcctggagctgaagctgctggacctgagggacaacaaactgaccaccgtcccc
tcagctcaggctaacgtgttagccacgaaactccacactgtttttctcaacggaaacact
ttcaactgctgccagttggactggtacaggacattcgagaaaacggtcactatcatggac
ctctcagatatttcatgtcaggatctgaccaaaagaacacacagagtggtgcttgtagac
tccctaatatgtggcggtagtgagggggagtctgtgtactggtacatcctgctgtttatc
gtacctgttctctgtctggttggaatggctgttatcttcctgctcacctttaggcccaga
ctgcttcccacagcagttagaaataaatgctggagtcaccttccctgtgttgtcgaagaa
aagtcccaaaaagaagacactggccgtgtccaaatacccatactagagatctaa
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