Oncorhynchus tshawytscha (Chinook salmon): 112227652
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Entry
112227652 CDS
T05605
Name
(RefSeq) E3 ubiquitin-protein ligase MARCHF6-like isoform X1
KO
K10661
E3 ubiquitin-protein ligase MARCH6 [EC:
2.3.2.27
]
Organism
otw
Oncorhynchus tshawytscha (Chinook salmon)
Pathway
otw04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
otw00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
112227652
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
otw04121
]
112227652
Enzymes [BR:
otw01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
112227652
Ubiquitin system [BR:
otw04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
March proteins
112227652
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
MARCHF6_C
RINGv
FAM165
Motif
Other DBs
NCBI-GeneID:
112227652
NCBI-ProteinID:
XP_042164381
UniProt:
A0AAZ3RLZ6
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All DBs
Position
LG29:28615212..28649938
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AA seq
932 aa
AA seq
DB search
MKMDIADEGDICRVCRSEGTPDKPLYHPCVCTGSIKFIHQECLVQWLKHSRKEYCELCKH
RFAFTPIYSPDMPPRLPIQDICAGLLTSVGTAIRYWFHYTLVAFAWLGVVPLTACRIYKC
LFTGSVTSLLTLPLDMLSTDNLLADCLQGCFVVTCTLCAFISLVWLREQIVHGGPPLWLE
HHQQPQPNAAGQQPNEAAGQGAADEPPAPANPPAHEAEPEPPDGPPEQGEEPELDNEEEE
GAAAEDVDANNGAQDDMNWNALEWDRAAEELTWERMLGLDGSLVFLEHVFWVVSLNTLFI
LVFAFCPYHIGHFSVMGLGFEEYVQASQFEGLITTIVGYILLAMTLILCHGFAALVRFQR
SRRLLGVCYIVVKVSLLVVVEIGVFPLICGWWLDICSLEMFDASLKDRELSFKSAPGTTM
FLHWLVGMVYVFYFASFILLLREVLRPGVLWFLRNLNDPDFNPVQEMIHLPIYRHLRRFI
LSVVVFGSIVLLMLWLPIRMIKLLLPAFLPYNVMLYSDAPVSELSLELLLLQVVLPALLE
QGHTRQWLKGLVRAWTVSAGYLLDLHSYLLGEQEDDANQPVNNNHAPGHQNNNNANPAPA
VGEGLHAAHQAILQQGGPIGFQPYHRPLRFPFRVSHTTHYHRPLRFPFRIVLLIGFMCIT
LLVSSLVCLTLPVFAGRWLMSFWTGSSKIHELYTAACGLYVCWLSIRGATVLLAWMPQGP
TIIMVKVQEWSLMILKTLVVALLVAGVIPLLLGLLFELVIVAPLRVPLDQTPLFYPWQDW
ALGVLHAKIIAAITLMGPQWWLKTVIEQVYANGIRNIDLHFIICKLAAPVISVLLLSLCV
PYVIAAGVVPAVGLSGVSGVTPEMQILIQRRIYPFLLMVVSIIGILSFQIRQFKRLYEHI
KNDKYLVGQRLVNYERKARGTSSVPPPNSIPE
NT seq
2799 nt
NT seq
+upstream
nt +downstream
nt
atgaagatggacattgcagatgaaggggatatatgtcgcgtgtgtcgttcagaggggacc
ccagacaaacccttgtaccacccctgtgtttgtactggcagcatcaagttcatccaccag
gaatgtttggtccagtggctgaagcacagcaggaaggagtactgtgaattatgcaagcac
agatttgctttcacaccaatctactccccagacatgcccccccgcctgcccatccaggac
atctgtgctggcctgctgaccagtgtgggcacagccatacgatactggtttcactacaca
ctggtggccttcgcatggctgggggtggtccccctcactgcatgtcgaatctacaagtgt
ctgtttaccggctctgtgacctcgctcctgacgctgcctttggacatgctctccacagat
aacctgctggcagactgtctgcagggctgcttcgtggtgacgtgtacactgtgtgcgttc
atcagtctggtgtggctcagggagcagatagtccatggtggtccccccctgtggctggag
caccaccagcagccccagcccaacgcagccggacaacagcccaacgaggctgccggtcaa
ggagcagctgatgaaccccctgcccctgccaaccccccagctcacgaggcagagccagag
cccccggatggcccgccagaacagggggaggagccagaactagacaatgaggaagaggag
ggggctgctgccgaagatgtggatgccaacaacggggctcaagatgatatgaactggaat
gctctagaatgggacagggcagcagaggagctcacatgggagaggatgcttggactcgat
ggctccttggtgttcttagagcatgtgttctgggttgtgtctctgaacactctcttcatc
ctggtcttcgcgttctgtccataccacattggtcacttctctgtcatgggccttggcttt
gaggaatatgtccaagcctcccaattcgagggcctgatcacaaccatcgtagggtacatc
ctgttggccatgacgctcatcctctgtcatgggttcgctgctctggtcaggttccagcgg
tcccgccgtctactaggggtctgctacatcgttgtcaaggtctcacttcttgttgtcgtg
gagataggagtcttccccctcatctgtggctggtggctcgacatctgctctttagagatg
tttgatgcgtctctgaaggacagagagctgagttttaaatctgctccaggcaccaccatg
ttcctgcactggctggtgggaatggtctacgtcttctacttcgcatccttcatcctccta
ctgagagaggtgctgaggcctggggtcctgtggtttctgagaaacctgaacgatccagac
ttcaacccagtccaggaaatgatccacctacctatctacagacacctccgcaggttcatc
ctgtctgtggtggtgtttggctctatcgttctcctgatgttgtggctgcccatcaggatg
atcaagctcctcctccctgccttcctgccctacaacgtcatgctttacagtgatgctcca
gtcagtgagctgtctctggagctgttgttactgcaggtggttctgccagctctcctggaa
caaggtcacacacgccagtggctgaaaggtctggtcagggcctggactgtcagcgctgga
tacctactagacctccactcttacttgctcggagaacaggaagacgatgctaaccagcct
gtcaacaacaaccatgctcccggtcaccaaaacaacaacaacgctaaccccgcccctgct
gtgggggaggggcttcatgcagcccatcaggccatactacagcagggaggaccaataggt
ttccaaccctaccatcggcccctacgcttccccttcagggtcagtcacactacacactac
catcggcccctacgcttccccttcaggatcgtcttgctgatagggttcatgtgtatcacc
ctgctggtttccagtctggtgtgtctgacgttaccagtgtttgcgggccgttggctgatg
tcattctggacaggcagctcgaagatccatgagctgtatacagcagcgtgtggtctgtac
gtgtgctggctgtccatccgcggtgccaccgtgctgttggcctggatgccccagggaccc
accatcatcatggtcaaagtccaggagtggagcctcatgattctgaagactctggtcgta
gcgttgctggtggctggtgttatccctctactattgggcctgctgtttgagctggtcatc
gttgctcccctacgcgttcctctggaccagacgcctctcttctacccctggcaggactgg
gctctgggggtgctccatgccaaaatcatcgctgccatcaccctcatgggtccacagtgg
tggctgaagacggtcatagaacaggtgtatgctaacggcatcaggaacatcgacctccat
ttcatcatctgtaagctggctgcccctgtcatctcggtgctgctgctgtccctgtgtgtc
ccctacgtcatagcagccggggtcgtacctgccgtaggtctgtcaggtgtgtcaggtgtg
actccagagatgcagattctgattcagaggaggatctacccgttcctcctgatggtggtg
tccatcatcggcatcctctccttccagatacgacagttcaagcgtctttacgaacacatc
aagaacgacaagtacctggttggccagcggcttgtcaactacgaacgcaaggctagggga
accagctctgttcctccccctaactctatcccagagtag
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