Oncorhynchus tshawytscha (Chinook salmon): 112227664
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Entry
112227664 CDS
T05605
Name
(RefSeq) polycomb complex protein BMI-1-A isoform X2
KO
K11459
polycomb group RING finger protein 4
Organism
otw
Oncorhynchus tshawytscha (Chinook salmon)
Pathway
otw03083
Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:
otw00001
]
09120 Genetic Information Processing
09126 Chromosome
03083 Polycomb repressive complex
112227664
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
otw03036
]
112227664
Chromosome and associated proteins [BR:
otw03036
]
Eukaryotic type
Histone modification proteins
Polycomb repressive complex (PRC) and associated proteins
Canonical PRC1 (PRC1.2/1.4)
112227664
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RAWUL
zf-C3HC4_2
zf-C3HC4
zf-RING_2
zf-C3HC4_3
zf-rbx1
zf-RING_5
zf-RING_UBOX
TBX2-3_TAD
zf-P11
zf-C3HC4_4
Prok-RING_4
zf-Nse
zf-RING_6
zf-RING_10
Motif
Other DBs
NCBI-GeneID:
112227664
NCBI-ProteinID:
XP_024248235
LinkDB
All DBs
Position
LG29:25897826..25906853
Genome browser
AA seq
328 aa
AA seq
DB search
MTMHRTTRIKITELNPHLMCVLCGGYFIDATTIIECLHSFCKMCIVRYLETSKYCPICDV
PVHKTKPLLNIRSDKTLQDIVYKLVPGLFKNEMKRRRDFYAAHPSVDATTRSNEDRGEVA
DEDKRIITDDEIISLSIEFFDHNKAKKTGVAEDKQSKEQVNNKRYLQCPAAMTIMHLRKF
LRSKMDIPCTYQVEVMYEDEPLKDYYTLMDVAYIYTWRRNGPLPLKYRVRPSCKKLKMSH
PQQEGQNSTGRSAESDSASDKACSPAGVPSTSSLPSPGTPVQSPHFPHISKPVNGASTSA
PAPTRPFPFGNKPRKASLNGSSLSSGLA
NT seq
987 nt
NT seq
+upstream
nt +downstream
nt
atgacgatgcatcgaacgaccagaattaagataactgagctgaacccccacctcatgtgt
gtgctgtgcggtggatactttatcgatgccaccacaattatagaatgtcttcattcattc
tgcaagatgtgcattgtacgctatctggagaccagcaagtattgtcccatctgtgatgtg
ccagtacacaaaaccaaacctctgctcaatataaggtctgacaaaaccctacaagacatt
gtctacaagctggtccctggtctcttcaaaaatgagatgaagagaaggagagacttttac
gcagcacatccttctgtagatgcgacgacaaggtctaatgaggatcgaggggaggtggct
gacgaggacaagagaatcatcacagacgatgaaatcatcagcctctccattgagttcttc
gaccacaataaggctaaaaagacaggcgtggctgaggacaaacagtctaaagaacaggtc
aataataagaggtatctgcagtgtcctgcagccatgaccatcatgcacctgagaaagttc
ctccgcagtaagatggacattccttgtacctatcaggttgaagtgatgtatgaagatgaa
cccctgaaagattactacacattaatggacgtagcctacatctacacctggagaaggaat
ggccctttgccgttgaagtaccgcgtcagaccgagctgtaagaagctgaagatgagtcat
ccgcagcaggagggccagaacagcactggtcggtccgctgagagcgactctgccagcgac
aaagcctgcagccctgccggcgtcccctccacctcctccttgcccagccctggtaccccg
gtgcagtccccacacttcccccacatctccaaacccgtcaacggcgcctccacctcggcc
ccagcccctaccagaccattccccttcggaaacaaaccgcggaaggcctcgctgaatggt
tcttctttgtcctcgggactggcctga
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