Oncorhynchus tshawytscha (Chinook salmon): 112227678
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Entry
112227678 CDS
T05605
Name
(RefSeq) la-related protein 4B isoform X1
KO
K18763
la-related protein 4
Organism
otw
Oncorhynchus tshawytscha (Chinook salmon)
Brite
KEGG Orthology (KO) [BR:
otw00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
otw03019
]
112227678
Messenger RNA biogenesis [BR:
otw03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Stress granule specific factors
112227678
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Gene cluster
GFIT
Motif
Pfam:
La
RRM_fung
Motif
Other DBs
NCBI-GeneID:
112227678
NCBI-ProteinID:
XP_042164725
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Position
LG29:25265545..25284941
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AA seq
631 aa
AA seq
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MTSDQESAVPAEPPVLLTRETWSHHLGLERQHLESTPVSELNPNAQVWANHTLSLDPSGL
VYTDALQSWLAVTSHLDNQEGYEQVYDLEEVGEAQLEPGGVEFPVVTMGNPSANGLVQDS
CVSEELMAQLKTSLESCLSRENLANDLYLVSQMDCDQYVPIATLANLDHIKKLSTDLELI
SDVLKSLPLVDVAECGQKVRPNRGRCIVILREVPETTPPEEVKALFACESLPRIQSCEFA
QNDNWFITFHSEADAQQAFQYLREEVRTFQGKPIKARIKAKVMAVTSYAPKNGYRPCPMD
PCTNQQPYSPYYAQPTFQQPLPQLYTMTNQSLAAMAGYTDPVMMASFSGFMDGFPGCPSF
KLSPSHRLRGQRDQRRLSGDRGLGLLDDPPFFLEGGPIGCVPGPPRQGRPRLPGNRRRDG
EGGRRGGRGGSGSSPSTDRGRRGPIGQRRRRDDKYSRGPPQSPPRSLSPSLELGPNSFPP
LPLATASTATVTTATNIHKATSNHKSPVRGSSTSEPTTVTSQDLQPITALPQKTLPLAKI
KETVVSPKRTTAARLTVKEPQTTKGNRPAVVRQLTDYRDKLESKKPSYAEICQRIRANQM
LTAKATDLTPLGTELVPAYPAQAPDPAQLSR
NT seq
1896 nt
NT seq
+upstream
nt +downstream
nt
atgacgtcagaccaggagtcggccgtcccagctgagcctccggtgctgctaacgcgggag
acgtggtcacaccacctcggtctggagcgtcaacacctggaatccaccccggtctctgag
ctgaacccaaacgctcaagtatgggccaatcacacacttagcctggacccctcaggcctt
gtctacactgacgccctccaatcatggctggcggtgaccagtcaccttgacaaccaggaa
gggtatgagcaggtatatgacctggaggaggtgggcgaggctcagctggaaccgggcggt
gtagaatttccggtggtcaccatgggaaacccgtcagccaatggcctggtccaggatagc
tgtgtgtcagaggagctcatggcacagctgaagacctcactggagtcctgtctgtcacgg
gagaacctggccaatgacctctacctcgtctcccagatggactgtgaccagtacgttccc
atagcaacgcttgccaacctcgaccacatcaagaagctcagcacggacttggagctcatc
tctgacgtcctcaagtcattgccactggtggatgtggcagaatgtgggcagaaggtacgg
ccaaatcggggtcgctgtatcgtcatcctccgagaggtcccagagaccacacccccagag
gaggtgaaggctctgtttgcatgtgagagcctccccaggatccagagctgtgagtttgcc
cagaacgacaactggttcatcaccttccacagtgaggctgatgctcaacaggcgttccaa
tacctaagagaggaggtaaggacgttccaggggaaacccatcaaggcacgaatcaaggcc
aaagtgatggcagtcacatcttacgctccaaagaatggctacaggccctgcccaatggac
ccctgcaccaatcagcagccttacagcccatactacgcccagcccactttccagcagccc
ctcccacagctctacacaatgactaatcagagcttggctgccatggccggatacacagac
cctgtcatgatggcgtcattctctggcttcatggacggcttcccaggatgccccagcttc
aagctatccccctcacacagactcaggggacagcgagaccagaggcggttgtctggcgac
agggggctgggccttctggatgatccccccttcttcctggagggtggaccaataggatgc
gttcctggcccccccaggcagggtcggccacggttaccaggcaacaggcgtagggacgga
gaggggggtcgacgtggagggagaggggggtcggggtcctcccccagcactgacagagga
aggagaggtcccattggtcagaggaggagaagagatgacaagtactctagagggcccccc
cagtcgcccccccgctccttgtctcccagtctggaactcggccccaatagcttcccccca
cttccccttgctacagcttctacagcaacagttaccacagcaaccaacatccataaggca
accagcaaccacaagagtccagttagaggcagcagtaccagtgaaccaaccactgtgaca
tcacaagacctccagcctatcacagcattgcctcagaaaaccctccccctagcgaagata
aaggaaactgtagtgtctcccaagagaaccacagcagctcgtctgaccgtgaaagaacct
cagaccacgaaggggaacagaccagcagtggtgagacaactcacagactacagagacaaa
ctggagtccaagaagccaagctacgctgagatctgccagcgcatacgagctaatcagatg
ctcaccgcaaaggctactgacctcacccccttggggacggagcttgtcccagcctatcct
gctcaggcgcctgacccggcacagttatcacggtga
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