Oncorhynchus tshawytscha (Chinook salmon): 112227798
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Entry
112227798 CDS
T05605
Symbol
tfap2a
Name
(RefSeq) transcription factor AP-2-alpha isoform X1
KO
K09176
transcription factor AP-2 alpha/beta
Organism
otw
Oncorhynchus tshawytscha (Chinook salmon)
Brite
KEGG Orthology (KO) [BR:
otw00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
otw03000
]
112227798 (tfap2a)
Transcription factors [BR:
otw03000
]
Eukaryotic type
Other basic domains
AP-2 (bHSH)
112227798 (tfap2a)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TF_AP-2
Motif
Other DBs
NCBI-GeneID:
112227798
NCBI-ProteinID:
XP_024248463
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All DBs
Position
LG29:complement(18805433..18818402)
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AA seq
462 aa
AA seq
DB search
MESEASETEVKNKGTWRADNRPLNSKNVPAEMPSAFAGFSHESEDRHDGTSNGTARLPQL
GGVGQSPYSAPPLSHTPNSDFQPPYFPPPYQPIYPQSQDPYSHVNDPYSLNSLHAQPQPQ
HPGWPGQRQSQESSLLHQHRGLPHQLCREYRREVLLPSGHGIDTGLSDSIPIHGIPHSLE
DVQVIQHYLHVEDQGIHIPDQTVIKKGPVSLSKNNNVSAIPINKDGLFGGVVNPNEVFCS
VPGRLSLLSSTSKYKVTVAEVQRRLSPPECLNASLLGGVLRRAKSKNGGRSLREKLDKIG
LNLPAGRRKAANVTLLTSLVEGEAVHLARDFGYVCETEFPAKAVAEYTNRQHSDPNEQVQ
RKNMLLATKQICKEFTDLLSQDRTPLGNSRPQPILEPGIQSCLTHFSLISHGFGTPAMCA
ALTALQNYLTEAIKAMDKMYLNNNSHSDSGTKGGDKDEKHRK
NT seq
1389 nt
NT seq
+upstream
nt +downstream
nt
atggaaagcgaggcgtcggaaactgaagtgaaaaacaaagggacatggcgagcagacaac
cgccctctgaacagtaaaaatgtgccagccgagatgccctcagcgtttgctggattttca
cacgaatcagaggatcgtcacgacggtaccagcaatgggacagccaggctacctcagttg
ggaggcgtgggccagtctccatatagcgcccctccactctcccataccccaaactccgac
ttccagccaccgtactttcctccgccctaccagccaatctacccccagtctcaggaccca
tactcgcacgtcaacgacccctactccctcaactccctgcacgctcagccgcagccacaa
caccctggctggccgggccagaggcaaagtcaggagagcagtttgctgcaccagcaccgt
ggcttgccccatcagctatgtagggagtaccgtagagaagtgctcctgccgtcgggccac
ggaatcgatacgggactctcagattctatcccaatccatggaatacctcactctttagaa
gatgttcaggtaattcagcattatttgcatgttgaggatcaaggaattcacatcccagat
cagactgtaattaaaaaaggtccagtttctttatccaagaacaacaacgtctccgccatt
ccgataaataaggatggtctttttggcggtgtggtaaaccccaacgaggtgttctgctct
gttccgggtcgcctgtctctgctcagctccacatcaaaatacaaggtcacggtggcggaa
gtgcagagacgcctttcgccgcctgagtgcctcaacgcgtcactgctgggcggggtgctg
agaagggccaagtctaagaatggcggaaggtccctcagagagaaattggataaaatcgga
ttaaatctacctgcaggtagacgcaaagccgcaaacgttaccctgctgacgtcactagtc
gaaggcgaagccgtgcatcttgccagagattttggttacgtatgcgagactgagtttcca
gccaaggcagtagctgaatatacaaaccgtcagcattccgacccaaacgaacaagtccag
aggaaaaacatgttattggcaacgaagcaaatctgcaaagaattcacagacctgctttcc
caggaccgtacgcccttggggaattctcgaccacaacctattcttgagccagggattcag
agttgcttgacccatttcagtctcatttctcacggattcgggaccccagccatgtgcgcg
gccctcaccgctctccagaactatctgaccgaggcgattaaagccatggacaaaatgtac
ctgaacaacaacagtcactcagacagcggcactaaaggcggagacaaagacgagaagcac
agaaagtga
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