Oncorhynchus tshawytscha (Chinook salmon): 112227820
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Entry
112227820 CDS
T05605
Name
(RefSeq) peroxisome proliferator-activated receptor alpha-like
KO
K07294
peroxisome proliferator-activated receptor alpha
Organism
otw
Oncorhynchus tshawytscha (Chinook salmon)
Pathway
otw03320
PPAR signaling pathway
otw04920
Adipocytokine signaling pathway
Brite
KEGG Orthology (KO) [BR:
otw00001
]
09150 Organismal Systems
09152 Endocrine system
04920 Adipocytokine signaling pathway
112227820
03320 PPAR signaling pathway
112227820
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
otw03000
]
112227820
09183 Protein families: signaling and cellular processes
03310 Nuclear receptors [BR:
otw03310
]
112227820
Transcription factors [BR:
otw03000
]
Eukaryotic type
Zinc finger
Cys4 thyroid hormone receptor-like
112227820
Nuclear receptors [BR:
otw03310
]
1. Thyroid hormone like
1C. Peroxisome proliferator-activated receptor (PPAR)
112227820
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Motif
Pfam:
zf-C4
Hormone_recep
Motif
Other DBs
NCBI-GeneID:
112227820
NCBI-ProteinID:
XP_024248551
UniProt:
A0A8C8LZ67
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Position
LG01:15926873..15993683
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AA seq
479 aa
AA seq
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MILPLVPSSVMVDMESHCRPPSPLEDSVLGSPLCGDFIGGMEELQDISQSIHGDAHSSFD
VPEYQSQSSNGSGSEGSTILDALTPASSPSSGVYGAVAGQEEFSSTSLNLECRVCADRAS
GYHYGVHACEGCKGFFRRTIRLKLEYDKCERRCKILKKNRNKCQYCRFQKCLSVGMSHNA
IRFGRMPQSEKLKLKAEIQTGDREVEDPEQADQKTLARHIYEAYLKNFNMNKAKARTILT
GKTSTPPFVIHDMDTLQLAEQTLVAKMVGTAGGHLLEKEAEVRIFHCCQCTSVETVTELT
EFAKSVPGFSSLDLNDQVTLLKYGVYEALFALLASCMNKDGLLVAYGSGFITREFLKSLR
RPFSDMMEPKFQFAMKFNGLELDDSDLALFVAAIICCGDRPGLVNVGHIERMQENIVQVL
RLHLLANHPDDTFLFPKLLQKLSDLRQLVTEHAQLVQEIKKTEDMSLHPLLQEIYRDMY
NT seq
1440 nt
NT seq
+upstream
nt +downstream
nt
atgatcctccccctagtcccgtcctccgtcatggtcgacatggagagccactgccggcct
ccgtcccccctagaggattcggtgctgggcagcccgctgtgtggggacttcatcgggggc
atggaggagctgcaggacatctcccaatccatccacggtgatgcccacagctcctttgac
gtccctgagtaccagtcccagtcgagtaacggctctggctctgaaggatccaccattcta
gatgctctgaccccagcctccagcccatcatcgggagtgtatggggcggttgcagggcag
gaagagttctcctccacctcgctcaacctggagtgtcgggtgtgtgccgaccgcgcctcc
ggataccactatggagttcacgcctgtgagggctgcaagggtttctttcggcggaccatc
cgcctcaagctggaatatgacaagtgtgaacgccgatgtaagatcctgaagaaaaaccgg
aacaagtgccaatactgccgcttccagaagtgcctgtctgtgggcatgtcccacaatgcg
atccgttttggtcggatgccccagtcagagaagctgaagctgaaggcagagatccagacg
ggggacagggaggtggaggaccccgagcaagccgaccagaagaccctggccaggcacatc
tatgaggcctacctcaaaaacttcaacatgaacaaggccaaagcccggaccatcctcacc
ggaaagaccagcactccaccatttgtcatccacgacatggataccctccagctggcagag
cagaccctcgttgccaagatggtgggcacggctgggggccatctgctggagaaggaggct
gaggtccgcatcttccactgctgccagtgcacctccgtggagacggtcacagagctgact
gagttcgccaagtctgtccccggcttctccagcctggacctgaacgaccaggtgactctg
ctgaagtatggagtgtacgaggcgctgttcgccctgctggcctcatgtatgaacaaggac
ggcctcctggtggcctacggatcgggcttcatcaccagggagtttctcaagagtctgagg
aggcccttcagcgacatgatggaacccaagttccagttcgccatgaagttcaacgggctg
gagctggatgacagtgacctggctctgtttgtggccgccatcatctgctgtggagaccgt
cccggcctggtgaacgttggccacattgagcgcatgcaggagaacattgttcaggtgctg
cggctccacctgctggccaaccacccagacgacaccttcctcttccccaagctgctgcag
aaactgtccgacctccggcagctggtcaccgagcacgctcagttggtccaggagatcaag
aaaacagaggacatgtcactccaccccttgctgcaggagatctacagagacatgtactga
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