Oncorhynchus tshawytscha (Chinook salmon): 112227848
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Entry
112227848 CDS
T05605
Name
(RefSeq) zinc finger CCHC domain-containing protein 2 isoform X1
KO
K22700
Zinc finger CCHC domain-containing protein 2
Organism
otw
Oncorhynchus tshawytscha (Chinook salmon)
Brite
KEGG Orthology (KO) [BR:
otw00001
]
09190 Not Included in Pathway or Brite
09194 Poorly characterized
99996 General function prediction only
112227848
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
zf-CCHC
Motif
Other DBs
NCBI-GeneID:
112227848
NCBI-ProteinID:
XP_024248561
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All DBs
Position
LG29:complement(15978770..16043660)
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AA seq
1147 aa
AA seq
DB search
MLKMKLPMRTAEAGGDDTAEEQPDLHIPRSVSDKLEGSSRHPGYPSQLDKETVFEWFGLH
LNPAKRIEFMCGLLHMCQPLELRFLGSCLEDLARKDNHVLRDVEIRANNPNDLAILSDVI
DPVVRSKLLVCLSLLGSDSRECAGILFRILSHVDPSLLFKNYGYSVSPFKDSQHHPFYSP
CVDGKTFGRTEQNCGLPMEAVIGPLEQLALLFTMASLHPAFPFHQREKVLEQLDKIQLAI
EDERQQNQRRINAQHNKAQKAEEHGPAAVTIEASLGERTQAQARHASQTPPSRRAQREAV
HVEKIVLKGILRRRTDREYNFVVTWSDSSSSNVTKTHLELESFLLKLPKEQSTESFEKGI
LRLLNQGDQYEIREVEGNLKEKFLSAPQAFRQKGKVCGFFLCESSSSSPSCGRFNPVALG
KPYKEDCSEASSQEEGVYLEPYIQGHRKKHGSKSPSLNIPNAKSSQGESSRRGPHGSEHN
GLPDWRRKSCTLKPNQDTSGGLGPEQNQDSEKRSSHPATKSKPRALGPDREKGKKGEGRV
AYLTNGSIVPLASQQTRQSSGKGCVCPDGHLVGGSSQDVYGDTSSESYSSPSSPQHDGPE
SLDSEDEKDKDTDSHSDNSSSQGRAGTFFPCQEVAGGGLPTIHPLASAKPAGEPLCPETI
PNFPPITFMQPLPYILPNGALPADASLPVLPPPQVAAALVDNKVVGGLIMQVPLVLREPM
PTPVPVPVPGDTEKRDALAAVPVLLPGFGSPTLGLHPPGSPALQPLIQRFKTAPHKATVT
SEGVTASSAHHPPVGAISVIAPGPPYASPLQPAYPDPAANPLTPSVPTPSVPLGEPSIPH
AKHPGMALPSGLPSPYTMPPIPTSIMATLGAGVAGIGVVPTAGQVQAVVPPSVPTHNPGP
VPSPSPALTHSTAQSDSTSYINSTSCASNLVSQQQVQPPQQQQQQQQQQQATPQQQPMCC
GACGCRGGCGTSNNSHTAPSFFFPHQMPPRQVFGVPPIFQLTSLCNSSYLSQPPLQSNGQ
AQLPFFPSAPAPYASQTLLHTHPHSHSDHLLGTQQGYSLQQMAPYNRFYPHMYPSSVGMV
PGAGGGGALGVAVGVNKKNANVSCYNCGVSGHYAQDCIQPSIDSTQQGGFRLKYAASHSS
DALDNAD
NT seq
3444 nt
NT seq
+upstream
nt +downstream
nt
atgcttaaaatgaagctgcccatgagaacggcggaggcaggaggagacgacacggccgag
gaacagcccgatctccatattccaagatcggtctccgacaagctcgaaggttcctccaga
cacccaggatatccatctcaattggataaagagaccgttttcgaatggtttggtttgcat
ttaaatcctgccaagcggatcgagtttatgtgcggactgctgcatatgtgccagccactt
gagctccggtttttgggctcctgtctggaagacctggctcggaaagataaccacgttcta
cgggatgtcgagataagggccaacaatccgaatgatctggccattttatcagatgttatc
gaccctgtcgtgcgctccaaactgctggtctgcttgtctcttctgggatctgacagcagg
gagtgtgcgggaatactatttaggatattgagccatgtggatccctccttgttattcaaa
aactatggctattctgtttcgcccttcaaggactctcaacatcacccgttctattctccg
tgtgtggacgggaaaacgttcgggagaacagaacagaattgcgggcttccaatggaggca
gtgatcggacccttggaacagttggcgctgctttttactatggcctccttgcatccagcg
ttcccttttcatcaaagagaaaaagttctagaacagctggacaaaattcaacttgctata
gaggacgagagacagcagaatcagcgcagaataaacgcccagcacaacaaggcccagaaa
gcagaggagcatggcccagcagcagtcaccatcgaggcaagtctgggtgagaggacgcag
gcacaggctcgccacgccagccagacaccccccagcagaagggcccaaagggaagccgtg
catgtagagaagatcgtgttgaaggggatcttacggaggaggacagacagggaatacaat
tttgtggtaacgtggtccgactcctcatccagcaatgtcaccaaaacacatcttgaactg
gaaagcttcttgctgaagcttccgaaggagcagtccaccgagtcgtttgaaaagggcatc
ctccggctactcaaccagggagaccagtacgagatcagggaagtggaggggaacctcaag
gagaagtttctgtcggctccacaagctttccgacagaaaggcaaggtctgtggcttcttc
ctgtgtgagtcctcctcctccagccccagctgcggcagatttaaccctgtggccctaggg
aagccatacaaagaggactgctcagaggcatccagccaggaggaaggtgtgtatttggag
ccgtacattcaggggcaccggaagaaacatggcagcaagagccccagccttaacattccc
aatgccaaaagttcccagggggagagcagtcggagggggccccacggctcggagcacaac
ggcctgccagactggaggaggaagagctgtacgctcaaacccaaccaagacacctctggg
gggctgggcccagagcagaatcaggacagtgagaagaggagcagccaccctgccaccaag
agcaagccacgagcactgggaccagacagggaaaaggggaagaaaggagaaggaagagtg
gcctacttgacgaacgggagcatagtgcctctggcttctcagcaaacgcgacaatcgtca
gggaaaggttgtgtgtgtccagacggtcatctagtcggaggctccagtcaggacgtgtac
ggagacacttcgtctgagagctacagctccccctccagcccccagcacgatggaccagag
agcctggacagcgaggacgagaaggacaaagatacagatagtcactcagacaactccagc
agccagggtagagcgggcaccttcttcccttgccaggaggttgcaggggggggcttgccc
accatccaccccctggcctctgccaagcctgctggggagcccctctgccccgagaccatc
cccaactttccccccatcacctttatgcaacccctgccctacatactgcccaacggagca
ctgcccgccgatgcctctctgccagtcctgcctcctcctcaggtggcagcggccctggta
gacaacaaggttgtgggaggactgatcatgcaggtgcccttggtcctccgagagcccatg
cccaccccagtgccagttcctgtgccaggggacacagaaaagagggatgcccttgctgca
gtgcccgtgctgcttccagggtttggctcccccaccctgggcttacacccccctggcagc
cctgccctgcagcccctgatccagcgcttcaaaaccgcccctcataaggcaactgtcact
tccgagggtgtcacggcctcctctgcccaccaccccccggttggagccatcagcgtcatc
gcccccggcccaccctacgcctcacccctgcagccagcctaccccgaccctgccgcaaac
cccctaacaccctctgtacccaccccctctgtacccctaggggagcctagcatccctcat
gccaagcacccgggtatggctcttccctcaggcttgccttctccatacaccatgcccccc
atccccacctccatcatggcaacgctgggggcaggggtagccggaataggggtagtgccc
acagctggacaggttcaagcggtggtgcccccatccgtgcccacccacaaccccggtcct
gtgcccagccccagccctgccctcacccacagcacggcacagagtgactccacctcctac
atcaacagcaccagctgtgccagtaacctagtctcccagcaacaagtgcaaccaccacaa
caacaacagcagcaacagcagcagcagcaggcgactccccagcaacagcccatgtgctgc
ggggcatgcggttgccggggaggctgcggaaccagcaacaacagccacacagcgccttca
ttcttcttcccccaccagatgccgccgcggcaggtgttcggtgtgccgcccatcttccag
ctgacgtccctgtgcaacagcagctacctcagtcagcctcccctccagagcaacggccag
gcccagctacccttctttccatccgccccggccccctacgccagccagaccctgctgcac
acgcacccccactcccactctgaccacctactgggcacacagcaaggctacagcctccag
cagatggcaccctacaaccgcttctacccgcacatgtacccctccagtgtgggcatggtg
cccggggcgggaggcggaggtgcactgggggtagcagtcggcgtcaacaagaagaacgcc
aacgtctcgtgctacaactgtggggtcagtggccactacgcacaggactgcatacagccc
tccattgactcgacacagcaaggtggctttcggctgaagtacgccgcctcccactcttcc
gatgcactagacaacgccgactga
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