Oncorhynchus tshawytscha (Chinook salmon): 112227855
Help
Entry
112227855 CDS
T05605
Name
(RefSeq) patched domain-containing protein 3-like
KO
K24682
patched domain-containing protein
Organism
otw
Oncorhynchus tshawytscha (Chinook salmon)
Brite
KEGG Orthology (KO) [BR:
otw00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
otw04990
]
112227855
Domain-containing proteins not elsewhere classified [BR:
otw04990
]
Other domain-containing proteins
Patched domain-containing proteins
112227855
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Patched
Sterol-sensing
MMPL
Motif
Other DBs
NCBI-GeneID:
112227855
NCBI-ProteinID:
XP_024248570
LinkDB
All DBs
Position
LG29:complement(15841524..15845939)
Genome browser
AA seq
836 aa
AA seq
DB search
MPSCHTDCIEKSVSNWFHKLGGFVGRNPWWFLLVPLLISAGLGAGFYFLEEREAHGIEDQ
FTPKDGPAKQERHFVKEHFPQNDSEFSRLRLYNEGSYGSFIAVSKSSDILSEKAFEEIIY
LDGTVREMVGQKGKTYENLCAMKSNRCFSNDMLDIINGTASTIKKANLTFPYHNSTSNTI
FLGTELGGVVLNSSIIVSAKAVRLFYFLRENNEAENDDWLHGFTQVFSNLSDELNKRQIQ
VSYFTSNSREEEFKENSKSVIPLFSVTYFLAISFSIISCLRLDCVRNKVWVAIFGALSAG
LAVLSSFGLLLLCGMPFAMTVATAPFLILGIGVDDMFIMISCWQQTQVHDSVEDRMAATY
KEAAVSITITTLTDALAFYIGLLTPFRSVQSFCMYTGTAVLFCYLYNITFFGAFLALNGS
REKGNRHWLTCMKVPEPEDSPEKYNICCVGGAYDQETGKEEVMPINNFFKMYYGPFLTTT
WTKVFVILLYAGYLGSSIYGCFQIQEGIDLKNLAADSSYVGSYYDNEDQYFSEYGPNVMV
VVTDSKFQYWDKTARKRLDTCLKRFESLTLDGRSLVAKDMTLSWLNEYVKVINPNNKTIF
MDSLPAFLQRSDFRQDVNISNKVIIASRMFIQTINVSTAVDEKNMLNKLRETANGCSEKL
VVYHPAFIYFDQYAVIVSNTIQNIVVATLAMLVISLMLIPNPICSLWVTFAIASVIVGVA
GFMALWDVNLDSVSMINLVICIGFSVDFSAHISYAFVSSKEVTANKKAVDAIYHLGYPII
QGAVSTILGVVVLSAAESYIFRTFFKIMFLVILFGVLHGIVFIPVFLTFFGICNFN
NT seq
2511 nt
NT seq
+upstream
nt +downstream
nt
atgccttcgtgtcacacagactgcattgaaaaatcagtgtcaaattggtttcataaactt
ggaggttttgttgggagaaatccatggtggtttctacttgtccctttgttaatctctgcg
gggcttggggcaggattttacttccttgaagagagagaggcgcatggcatagaggaccag
tttactccaaaggacgggcctgcaaaacaggagagacattttgtcaaagaacattttcct
cagaatgattcagagttctctcgtttgcggctgtataacgaggggagctatgggtctttc
atcgctgtttcaaagtcatccgatatcttgagtgagaaggcatttgaggagatcatatat
ttagatggaacagttagagagatggtaggccaaaaaggaaaaacctatgaaaacctttgt
gccatgaaaagtaacaggtgcttttcaaatgacatgttagatatcattaatggcacagct
agtacaattaagaaggcaaacttgacctttccttatcataattcaacgtcaaacaccatc
tttttggggacagaacttggtggagtagttttgaattcaagtatcatcgttagtgcaaag
gctgttcgactcttctactttctcagagaaaacaacgaggcagaaaatgatgattggcta
catgggtttactcaagtgttttccaacttgtcagatgaattgaataagcggcagattcaa
gtttcatacttcacatctaattctagagaggaggagtttaaggaaaactccaaatctgtg
attcctctcttctccgtcacatacttcctggccataagtttttcaattatatcttgcttg
aggttggactgtgtgaggaacaaggtgtgggtggccatctttggtgctctatctgcaggc
ctagctgtgctgtccagtttcgggttgttgctgctctgtggaatgccctttgccatgact
gttgcaacggctcctttcttaatactgggaattggtgttgacgacatgttcatcatgatt
tcctgctggcagcagactcaagttcatgacagcgtagaggaccgtatggcagctacatac
aaagaggcagctgtctctatcaccatcacaacactaactgatgccctggccttctatatt
ggtctgttaactccctttcgttctgtacaatccttttgtatgtatactggcacagctgtc
ctgttctgttacttgtacaatattaccttctttggtgcatttctggcattgaatgggagt
cgtgaaaagggcaacagacactggctgacatgcatgaaggttccagaaccagaggatagt
cctgaaaagtacaatatctgctgtgtaggaggagcttatgaccaggaaacgggaaaagag
gaagttatgcccattaacaacttctttaagatgtactatgggccatttctaacaactact
tggaccaaggtgtttgtgatcctgctctatgctggatatttgggctcaagtatctatggt
tgcttccaaatacaagaaggcatagaccttaaaaacctagcagctgatagctcatatgtg
ggtagctattatgataatgaggaccaatacttttcagagtatggtccaaatgttatggtt
gttgtgactgacagtaagtttcaatattgggacaaaactgctcgaaagcgtcttgatact
tgtcttaaacgttttgagagtctaactttggatggtcgatcattggttgctaaagatatg
actctttcttggcttaatgaatatgtgaaagttataaatccaaataacaaaaccattttc
atggatagtttacctgcgtttttacaacgatcagacttcagacaagatgtgaatatttca
aacaaagtcataattgcctcgcgaatgtttattcagacaatcaacgtcagtacagctgtt
gatgaaaagaacatgttgaataagcttcgagagacagctaatggttgttcagaaaagttg
gttgtttaccaccctgctttcatatactttgaccagtatgcagtcattgttagtaatacc
atccaaaacattgtagttgccactcttgccatgctggtgatctccctcatgttgatcccc
aaccccatatgttctctgtgggtgacctttgctattgcctctgtcatagtgggtgttgct
ggtttcatggcattatgggatgtcaatctagactctgtatccatgatcaatcttgtcatc
tgcattggtttctcagtggatttttctgctcacatttcctatgcttttgtctctagcaaa
gaggtcactgctaataagaaggctgtagatgctatctatcacttggggtatcccatcata
cagggagctgtgtctactattttaggagtggtggtgctgtctgcagctgagagctacatc
ttcagaaccttctttaagatcatgttcttggtcattttgtttggggtacttcatggcatc
gttttcatccctgtgtttctgaccttctttggcatatgcaattttaattga
DBGET
integrated database retrieval system
