Oncorhynchus tshawytscha (Chinook salmon): 112227878
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Entry
112227878 CDS
T05605
Name
(RefSeq) Wilms tumor protein 1-interacting protein-like
KO
K16682
LIM domain-containing protein
Organism
otw
Oncorhynchus tshawytscha (Chinook salmon)
Brite
KEGG Orthology (KO) [BR:
otw00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
otw03019
]
112227878
03036 Chromosome and associated proteins [BR:
otw03036
]
112227878
Messenger RNA biogenesis [BR:
otw03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Common to processing body (P body) and stress granule
112227878
Chromosome and associated proteins [BR:
otw03036
]
Eukaryotic type
Sister chromatid separation proteins
Aurora kinases
Regulators of Aurora kinases
112227878
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LIM
Motif
Other DBs
NCBI-GeneID:
112227878
NCBI-ProteinID:
XP_042165883
LinkDB
All DBs
Position
LG03:complement(13063137..13098636)
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AA seq
680 aa
AA seq
DB search
MDKYDDLDLEASKFLEDLNMYEASRDGLFRMKKDARNNSDFEETRRVFASKMTKIHIQKQ
QEEIAKNNLVVRMNGGQNRAADSTFYTRDRPPINSYRPAGEAAAKPPILSGPLPGTASGA
SQYAPYDALKHHSPSQQSYGYGNNYDNKERFEPHSYHHALSPTSPGNAHTHASGHPASPS
GTSASYSSRGGQASSGSSSPAGSSGLMCSPSQHPPHHSPSPPFSDSLQSLSPTRLHQSKA
ATLLVQQRPPMLADAGAAADWMRSLGHPDLLAPLPLSAFTGGADLYQQLSPQLATVTPPT
GPYSAASSMSPRSTANHGNLGQNGLSQSPVVLTPSPTPAQVAVPAPPAPPSEAAQPKATA
GAYFPASASPSGISVSRSFGQGQGVGQAQGRQVAMGVDVPSGLDSQLSSGGEACQPQPQS
EAPSTPRALKLPSQTLHVQPEQGPSAAEIKLEALTKRLEKEMDAQPKADYFGSCVKCNKA
VYGATAACQAMGSLYHDVCFTCSACSRRLRGKAFYYVGGNVFCEEDFLYSGFQQSADKCN
ACGHLIMDMILQALGKSYHPGCFRCVICNDSLDGVPFTVDTENKIYCVKDYHRVLAPKCA
ACNQPILPSEGSDETIRVVSMDKDYHVECYHCEDCQMELNDEEGHRCYPLDGHLLCHACH
LKHIEPGCASPTAASYQHQF
NT seq
2043 nt
NT seq
+upstream
nt +downstream
nt
atggataaatacgacgatttggatcttgaggcaagtaagtttttagaagaccttaatatg
tatgaggcatctagggacgggctgttccgaatgaagaaggatgcacggaacaattccgac
tttgaagaaaccaggagagtttttgcctccaaaatgacaaaaatccacatacagaaacag
caagaggaaattgccaaaaacaatttggtagtgagaatgaacgggggtcaaaacagagcg
gcagacagcacgttttacaccagagacaggccgcctatcaatagctacagaccggcaggg
gaagctgcagccaagcctcccatactctctggccctttgccaggcaccgccagtggcgcg
agtcagtacgcgccctatgacgctttgaaacaccattcacccagtcaacagtcatacggc
tacggaaacaattacgataacaaggagcgttttgagccgcattcttaccaccacgccttg
agtcccaccagccctgggaacgcacacacacatgcttctggtcaccctgccagtccctcg
ggcacttcggcctcctactcctccaggggtggccaggcctcctcaggatcctccagccct
gctggatcatcaggccttatgtgcagcccatctcagcatcccccacaccactcaccatct
ccccccttctccgacagcctacagtctctgagccccactagactgcaccagagcaaggct
gccaccctactggtgcagcagagaccccccatgttggctgatgctggggctgcagcagac
tggatgcggagcttggggcacccagacctgttagcaccgctccctctgagtgccttcact
ggcggagctgacctgtaccagcagctgtctccccaacttgccactgttacaccgccaaca
ggcccttactcagcagcatcctctatgagcccaagatcaacagccaaccatggaaatcta
ggccagaatgggctctctcagagtcctgtggttctcacccccagccccacccctgctcaa
gtggctgtcccagccccacctgcacccccatctgaggcagcccagcccaaagccacagct
ggagcttacttccctgcctctgcctctccttctggaatcagtgtctctagaagctttggc
caggggcaaggtgtaggccaggctcagggcaggcaagtggccatgggggtggatgtgccc
tctggcctagacagccagctgtcctctggtggtgaggcatgccaaccccagccccagtct
gaagcccccagcacccccagagctctcaaattgcccagccagactctccatgtccagccg
gagcaggggccgtctgccgccgagatcaaattagaagccctgaccaagcgtctggagaag
gagatggacgcccagcccaaggcagactacttcgggagctgtgtgaagtgtaacaaggcg
gtgtacggagccactgcggcctgccaggctatgggaagcctctatcatgatgtctgcttc
acctgcagcgcctgcagcagaaggctacggggcaaagcattttactacgtcggtgggaat
gtgttctgtgaagaggactttctgtattctggattccagcagtctgcagacaagtgtaac
gcatgcggacatctgatcatggatatgatcctgcaggcccttgggaagtcctaccaccct
ggctgtttccgttgtgtcatctgtaacgacagtctggacggagtgcccttcactgtggac
acagagaacaagatttactgtgtcaaagactaccacagggtcttggcccccaaatgtgca
gcatgtaaccagcccattctgccttcagagggctctgatgaaaccatccgagtggtatcc
atggataaagactaccacgtggagtgctatcactgtgaagactgtcagatggagctgaac
gacgaggaggggcaccgctgctacccgctggacggccacctcctctgccacgcctgccac
ctgaagcacatcgagccgggctgcgcctcgcccaccgctgcctcctaccagcaccagttt
tag
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