Oncorhynchus tshawytscha (Chinook salmon): 112227891
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Entry
112227891 CDS
T05605
Name
(RefSeq) sodium- and chloride-dependent transporter XTRP3-like
KO
K05048
solute carrier family 6 (neurotransmitter transporter, amino acid/orphan) member 15/16/17/18/20
Organism
otw
Oncorhynchus tshawytscha (Chinook salmon)
Brite
KEGG Orthology (KO) [BR:
otw00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
otw02000
]
112227891
Transporters [BR:
otw02000
]
Solute carrier family (SLC)
SLC6: Sodium- and chloride-dependent neurotransmitter transporter
112227891
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GFIT
Motif
Pfam:
SNF
SLT
Motif
Other DBs
NCBI-GeneID:
112227891
NCBI-ProteinID:
XP_042165870
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Position
LG03:13002757..13034980
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AA seq
600 aa
AA seq
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MGKDAARAEWDNPMQFVLACVSYAVGLGNVWRFPYLCQMHGGGGFLIPYLLMLVLLGVPL
FYMELAIGQKMRLGSIGAWRAINPYLGGVGLASVVTSMYLCLYYNVINAWSFWYLFHSFQ
SILPWAECPVNSNLTGHVEECERATPTQYFFYRETLDISGSIEENGGIHMGQALCLLLAW
MIVYLFIVKGVKSTGKVVYFTATFPYLVLIIYLIRGVTLHGSINGVKYMFTPKMEQLANP
TTWINAATQIFFSLGLGFGSLIAFASYNQYNNNFEKQAIVVSMVNSSTSIFASIVTFSIY
GFKATFNYESCLERVRLLLLNTFDLAEDTISLENVIHWIAELNRTHPEQFTSLGGRLETC
DLEAELDTAVEGTGLAFIVYSEAIKNMPVSQLWSVLYFIMLLLLGMGSMLGNVIAVITPL
SDLKFISRYMSTKTLNGLVCLFCLLLGLGFTTRSGNYWFTMFNDYGATFSLLFIVLIEVI
TVCYIYGIKRFEKDVEDMLGHRLNCYWKIMLAGVSPILLIALFIFYIVNYIQGGTPTYQA
WNKELGKSVVTEYPPYAQAFIGLLLASSVCCIPLTALYTYCKKRNLASGKRERTVSTVSA
NT seq
1803 nt
NT seq
+upstream
nt +downstream
nt
atggggaaggacgccgcaagagcagagtgggacaatcccatgcaatttgtcctggcgtgt
gtatcatacgcggttggactgggaaatgtgtggcgatttccatacttgtgtcaaatgcat
ggcgggggtgggtttctgatcccatacttgcttatgctggtcctgttgggggtacccctg
ttctacatggagttagccattggccagaagatgcgtctgggcagcattggagcatggaga
gctattaacccctatctggggggagtgggtctggccagtgttgtgacctccatgtaccta
tgtctctattacaatgtcatcaatgcatggagtttctggtacctctttcattcattccag
tcgatcctgccatgggcagagtgcccggttaacagcaacctgactggccatgtggaggag
tgtgagcgggccacgcccacccagtacttcttctacagagagaccctggacatctccggg
tccattgaggagaacggagggattcacatgggacaggcactctgcctcctgctggcctgg
atgattgtctacctgtttatcgtcaagggggtcaagtccaccgggaaggtggtgtacttc
acagccacattcccctacctggtcctcatcatctacctcatccgtggggtcacccttcac
ggatccatcaacggtgtaaagtacatgttcacgcccaagatggaacagctggctaacccc
actacatggatcaatgcggccactcagatcttcttctctctgggcctgggctttggatcc
ctcatcgcctttgccagctacaaccagtacaacaacaactttgagaagcaggccatcgtc
gtgtccatggtcaacagtagcacctccatcttcgccagtatcgtcaccttctccatctat
ggctttaaggccaccttcaactacgagagctgcctggagagggtgcgactgctgctcctg
aacacctttgatctagcagaggacaccatcagtctggagaatgtcatccactggatcgct
gagctgaacaggacacacccagaacagtttaccagtctgggaggtaggctggagacctgt
gacctagaggctgaactagacacggctgttgagggtacaggcctggccttcatagtgtac
agtgaggccattaagaacatgcccgtgtctcagctgtggtctgtgctctacttcatcatg
ctgctgctgctgggcatgggcagtatgctgggcaacgtcatcgccgtcatcacccccctc
agtgacttgaagttcatcagccgctacatgagcaccaaaacactcaatggtctggtgtgt
ctattctgcctgctgcttggcctgggcttcaccacccgttctgggaactactggttcacc
atgttcaacgactatggagccaccttctctctgctcttcatcgtcctcattgaagttatc
accgtctgctacatatatggcatcaaaaggtttgagaaggatgtagaagacatgttaggt
catcgtcttaactgctactggaagatcatgttggcaggagtcagtcccatcctcctcatt
gccctattcatcttctacatcgtcaactacatccagggaggaacgcccacataccaggcc
tggaacaaagaactggggaagtctgtggtgacggagtatcctccctacgcccaagccttc
atcggcctcctcctagcctcctctgtctgctgtatccctttgacggccctctacacctac
tgtaagaagaggaacctggccagtgggaagagagagcgcactgtcagcactgtgtcagcg
taa
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